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The map label for this gene is ybgL [C]

Identifier: 99081895

GI number: 99081895

Start: 2158951

End: 2159724

Strand: Reverse

Name: ybgL [C]

Synonym: TM1040_2055

Alternate gene names: 99081895

Gene position: 2159724-2158951 (Counterclockwise)

Preceding gene: 99081896

Following gene: 99081893

Centisome position: 67.47

GC content: 66.02

Gene sequence:

>774_bases
ATGACATCTACCGTAGATCTGAATGCCGACATGGGCGAGAGCTTTGGCCCGTGGGTGATGGGACGCGATGCCGAGGTGCT
GGACGTTGTGACCTCGGCCAATGTGGCCTGCGGTGTACATGCGGGCGACTGGGACGTCATGGCGCAGACCATGGCCGATG
CGGTGGCGCGCGGCGTCGGCATTGGCGCGCATCCGGGCTTTCCCGATCTTCAGGGCTTTGGCCGGCGTAAGCTGCACTTG
CCGCATGAGAGCCTCGGCAATCTGGTACAGTACCAGGTGGGCGCCGCCCAGGCGATGGCAGAGGCCGCCGGGGGCAAGGT
GCGTCATCTGAAACTGCACGGGGCCATGGCCAATATGGCCGCAGCCGATCATGACATGGCGCGCGCCTGTTATGAGGCTG
CTCTGCGGGTCGCGCCGGAGATCATCATCATGGTGATGGCAGGCACTCAGCAGCAGGCCGCAGCCGAGGCGCTGGGCTGC
AATGTCGCCTGCGAGATCTTTGCTGACCGGGCTTATAACGCCGATGCCTCGCTGGTGGATCGGTCCTTGCCGGGCGCGGT
GATCCATGATGCCGAGCGTGCTGGCGCGCGGGTGGCTCAGATGGTGCAGGACGGGGCAATTCTGGCCGAGGACGGCAGCC
GTATCCCGGCGCGCATCGACACCATCTGCCTGCACGGCGATACGCCCGAGGCGCTGGAGATCGCGCGCGCGGTACGCCGC
CAGCTCGAAGATGCGGGCGTCACCTTGCAGCAGTTCGACGGCAAGCCGCTCTGA

Upstream 100 bases:

>100_bases
TGTCCTATCAACTGGTGAGCGGCGTGACCGCCGGGCGCGATCTTGATGAGGCGCTCTGAGCGCGCTGCGGACGCAAACGA
ACGAAGGAGGGCCATGGGCC

Downstream 100 bases:

>100_bases
TCAGGCGCTGATCCGGGCCTGATTTGGGTAGGCTACGGCGGGGAGGCTCCCGCCCGTCAGTCATGCCCCACCTTTTCAAG
GTGGGACCCGACCTCCCGTT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MTSTVDLNADMGESFGPWVMGRDAEVLDVVTSANVACGVHAGDWDVMAQTMADAVARGVGIGAHPGFPDLQGFGRRKLHL
PHESLGNLVQYQVGAAQAMAEAAGGKVRHLKLHGAMANMAAADHDMARACYEAALRVAPEIIIMVMAGTQQQAAAEALGC
NVACEIFADRAYNADASLVDRSLPGAVIHDAERAGARVAQMVQDGAILAEDGSRIPARIDTICLHGDTPEALEIARAVRR
QLEDAGVTLQQFDGKPL

Sequences:

>Translated_257_residues
MTSTVDLNADMGESFGPWVMGRDAEVLDVVTSANVACGVHAGDWDVMAQTMADAVARGVGIGAHPGFPDLQGFGRRKLHL
PHESLGNLVQYQVGAAQAMAEAAGGKVRHLKLHGAMANMAAADHDMARACYEAALRVAPEIIIMVMAGTQQQAAAEALGC
NVACEIFADRAYNADASLVDRSLPGAVIHDAERAGARVAQMVQDGAILAEDGSRIPARIDTICLHGDTPEALEIARAVRR
QLEDAGVTLQQFDGKPL
>Mature_256_residues
TSTVDLNADMGESFGPWVMGRDAEVLDVVTSANVACGVHAGDWDVMAQTMADAVARGVGIGAHPGFPDLQGFGRRKLHLP
HESLGNLVQYQVGAAQAMAEAAGGKVRHLKLHGAMANMAAADHDMARACYEAALRVAPEIIIMVMAGTQQQAAAEALGCN
VACEIFADRAYNADASLVDRSLPGAVIHDAERAGARVAQMVQDGAILAEDGSRIPARIDTICLHGDTPEALEIARAVRRQ
LEDAGVTLQQFDGKPL

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=245, Percent_Identity=41.2244897959184, Blast_Score=185, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 26989; Mature: 26858

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTVDLNADMGESFGPWVMGRDAEVLDVVTSANVACGVHAGDWDVMAQTMADAVARGVG
CCCEEECCCCCCCCCCCEEECCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCC
IGAHPGFPDLQGFGRRKLHLPHESLGNLVQYQVGAAQAMAEAAGGKVRHLKLHGAMANMA
CCCCCCCCCHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
AADHDMARACYEAALRVAPEIIIMVMAGTQQQAAAEALGCNVACEIFADRAYNADASLVD
HHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCCEEEEHHCCCCCCCHHHHH
RSLPGAVIHDAERAGARVAQMVQDGAILAEDGSRIPARIDTICLHGDTPEALEIARAVRR
CCCCCHHHHCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHH
QLEDAGVTLQQFDGKPL
HHHHHCCCHHHCCCCCC
>Mature Secondary Structure 
TSTVDLNADMGESFGPWVMGRDAEVLDVVTSANVACGVHAGDWDVMAQTMADAVARGVG
CCEEECCCCCCCCCCCEEECCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCC
IGAHPGFPDLQGFGRRKLHLPHESLGNLVQYQVGAAQAMAEAAGGKVRHLKLHGAMANMA
CCCCCCCCCHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
AADHDMARACYEAALRVAPEIIIMVMAGTQQQAAAEALGCNVACEIFADRAYNADASLVD
HHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCCEEEEHHCCCCCCCHHHHH
RSLPGAVIHDAERAGARVAQMVQDGAILAEDGSRIPARIDTICLHGDTPEALEIARAVRR
CCCCCHHHHCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHH
QLEDAGVTLQQFDGKPL
HHHHHCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA