Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081878

Identifier: 99081878

GI number: 99081878

Start: 2145590

End: 2145979

Strand: Reverse

Name: 99081878

Synonym: TM1040_2038

Alternate gene names: NA

Gene position: 2145979-2145590 (Counterclockwise)

Preceding gene: 99081883

Following gene: 99081875

Centisome position: 67.04

GC content: 59.49

Gene sequence:

>390_bases
ATGAAACAGATACTCGCGAGCATTGCGCTCATAGTTGGGATGAGCACTGCAGCCTTTGCTGCCGACCCCATCGAGGGCAC
CTGGAAGACACAGCCCGATGACGGCTCTTACGCACATATCGCGATGAAGCCCTGCGGTGCGGCTCTCTGCGGCACCATCG
CACGCACCTTCAACGACGGCGGAGAATACAGCTCCCCCAACCTTGGCAAAACGCTGGTGATGGACATGGTCCCGCAAGGC
GGCGGCGCCTATGAGGGCAAGGTCTGGCGCCCGTCAAACGATAAAATCTACATCGGCAAGATGGATCTCAACGGCAACAG
CCTGCGTCTGCGGGGCTGTGTCGCGGGCGGCCTGATCTGCTCGAAACAGACCTGGACACGGGTGAAATAA

Upstream 100 bases:

>100_bases
CCGGTCCTGAGCGCACGCAGTGCCGAGGGCGACCCGAGGTCAATCTTGCCTGAATGCGCCTGCCTCGGTCAGACTTCACC
TCATAGGGAGGACAAGACAT

Downstream 100 bases:

>100_bases
GGCGCGCTTTCACAGGGAGCCAGCAGGAAACCATCAGCGGGCTTGTGCGTTCAGAACAGGCCCATCTGCACCGGGATCGG
CACAAAGCCACGCTTGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKQILASIALIVGMSTAAFAADPIEGTWKTQPDDGSYAHIAMKPCGAALCGTIARTFNDGGEYSSPNLGKTLVMDMVPQG
GGAYEGKVWRPSNDKIYIGKMDLNGNSLRLRGCVAGGLICSKQTWTRVK

Sequences:

>Translated_129_residues
MKQILASIALIVGMSTAAFAADPIEGTWKTQPDDGSYAHIAMKPCGAALCGTIARTFNDGGEYSSPNLGKTLVMDMVPQG
GGAYEGKVWRPSNDKIYIGKMDLNGNSLRLRGCVAGGLICSKQTWTRVK
>Mature_129_residues
MKQILASIALIVGMSTAAFAADPIEGTWKTQPDDGSYAHIAMKPCGAALCGTIARTFNDGGEYSSPNLGKTLVMDMVPQG
GGAYEGKVWRPSNDKIYIGKMDLNGNSLRLRGCVAGGLICSKQTWTRVK

Specific function: Unknown

COG id: COG4731

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13685; Mature: 13685

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQILASIALIVGMSTAAFAADPIEGTWKTQPDDGSYAHIAMKPCGAALCGTIARTFNDG
CHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCC
GEYSSPNLGKTLVMDMVPQGGGAYEGKVWRPSNDKIYIGKMDLNGNSLRLRGCVAGGLIC
CCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCEEEEEEEECCCCEEEEEEEEECCEEE
SKQTWTRVK
CCCCCCCCC
>Mature Secondary Structure
MKQILASIALIVGMSTAAFAADPIEGTWKTQPDDGSYAHIAMKPCGAALCGTIARTFNDG
CHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCC
GEYSSPNLGKTLVMDMVPQGGGAYEGKVWRPSNDKIYIGKMDLNGNSLRLRGCVAGGLIC
CCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCEEEEEEEECCCCEEEEEEEEECCEEE
SKQTWTRVK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA