| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081878
Identifier: 99081878
GI number: 99081878
Start: 2145590
End: 2145979
Strand: Reverse
Name: 99081878
Synonym: TM1040_2038
Alternate gene names: NA
Gene position: 2145979-2145590 (Counterclockwise)
Preceding gene: 99081883
Following gene: 99081875
Centisome position: 67.04
GC content: 59.49
Gene sequence:
>390_bases ATGAAACAGATACTCGCGAGCATTGCGCTCATAGTTGGGATGAGCACTGCAGCCTTTGCTGCCGACCCCATCGAGGGCAC CTGGAAGACACAGCCCGATGACGGCTCTTACGCACATATCGCGATGAAGCCCTGCGGTGCGGCTCTCTGCGGCACCATCG CACGCACCTTCAACGACGGCGGAGAATACAGCTCCCCCAACCTTGGCAAAACGCTGGTGATGGACATGGTCCCGCAAGGC GGCGGCGCCTATGAGGGCAAGGTCTGGCGCCCGTCAAACGATAAAATCTACATCGGCAAGATGGATCTCAACGGCAACAG CCTGCGTCTGCGGGGCTGTGTCGCGGGCGGCCTGATCTGCTCGAAACAGACCTGGACACGGGTGAAATAA
Upstream 100 bases:
>100_bases CCGGTCCTGAGCGCACGCAGTGCCGAGGGCGACCCGAGGTCAATCTTGCCTGAATGCGCCTGCCTCGGTCAGACTTCACC TCATAGGGAGGACAAGACAT
Downstream 100 bases:
>100_bases GGCGCGCTTTCACAGGGAGCCAGCAGGAAACCATCAGCGGGCTTGTGCGTTCAGAACAGGCCCATCTGCACCGGGATCGG CACAAAGCCACGCTTGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MKQILASIALIVGMSTAAFAADPIEGTWKTQPDDGSYAHIAMKPCGAALCGTIARTFNDGGEYSSPNLGKTLVMDMVPQG GGAYEGKVWRPSNDKIYIGKMDLNGNSLRLRGCVAGGLICSKQTWTRVK
Sequences:
>Translated_129_residues MKQILASIALIVGMSTAAFAADPIEGTWKTQPDDGSYAHIAMKPCGAALCGTIARTFNDGGEYSSPNLGKTLVMDMVPQG GGAYEGKVWRPSNDKIYIGKMDLNGNSLRLRGCVAGGLICSKQTWTRVK >Mature_129_residues MKQILASIALIVGMSTAAFAADPIEGTWKTQPDDGSYAHIAMKPCGAALCGTIARTFNDGGEYSSPNLGKTLVMDMVPQG GGAYEGKVWRPSNDKIYIGKMDLNGNSLRLRGCVAGGLICSKQTWTRVK
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13685; Mature: 13685
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQILASIALIVGMSTAAFAADPIEGTWKTQPDDGSYAHIAMKPCGAALCGTIARTFNDG CHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCC GEYSSPNLGKTLVMDMVPQGGGAYEGKVWRPSNDKIYIGKMDLNGNSLRLRGCVAGGLIC CCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCEEEEEEEECCCCEEEEEEEEECCEEE SKQTWTRVK CCCCCCCCC >Mature Secondary Structure MKQILASIALIVGMSTAAFAADPIEGTWKTQPDDGSYAHIAMKPCGAALCGTIARTFNDG CHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCC GEYSSPNLGKTLVMDMVPQGGGAYEGKVWRPSNDKIYIGKMDLNGNSLRLRGCVAGGLIC CCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCEEEEEEEECCCCEEEEEEEEECCEEE SKQTWTRVK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA