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The map label for this gene is ycaQ [H]

Identifier: 99081883

GI number: 99081883

Start: 2149095

End: 2150258

Strand: Reverse

Name: ycaQ [H]

Synonym: TM1040_2043

Alternate gene names: 99081883

Gene position: 2150258-2149095 (Counterclockwise)

Preceding gene: 99081884

Following gene: 99081878

Centisome position: 67.18

GC content: 61.43

Gene sequence:

>1164_bases
ATGGCCCGATTAAAAATAGACAATCGAACCGCCCGCAGCCTGTGGCTTCAGTTGCATGGCCTGGCGCAGACGCCCACCGG
GCCTCTGGATGTACTCGGGCTGATCGAACAGCTTGGCTTCGTGCAACTTGATACCATTCAGGTGGTGTCGCGCGCGCATC
ATCACATCCTCTGGAGCCGCAATCAGAATTACCGCGAGCCGATGCTCGACCCGCTGCTGCGCACGCACCGACAGGTGTTT
GAGCATTTCACCCATGATGCCTCGGTGTTGCCGATGGCGTTTCTGCCCATGTGGCAGCGGCAGTTTGCGCGCAAAAAGCA
TCAGGTGAGCCGCTCCAACTGGTTTGGCAAGCATCTGGACCCCGAGCTGATTTCGGACGTTTTGCGCCGGATCACGGAGG
ACGGCCCGCTCTCCACCAAGGACTTTGAGACCAGGCGTGCGGACAGGACGGCCATGTGGACCCGCCCGCCGCACAAGATG
GTGCTCGACTATCTCTGGTATGCGGGCGAACTGGCCACCTCGCATCGGGAGGGCTTTACCAAATACTACGATCTGGCCGA
GCGCGTGTATCCGCAAGACGTGCCTCAGCTGAGCGATCAGGCTCAGGTGCAGGGGCTCTGTCATGCGGCGCTTGATCGGA
TCGGCTTTGGCACTTTGGGGCAGATCCGCAAATTCTGGGAGGCGTGCGCGGTCGAAGAAGTGGCGCGCTGGGCAGAAGAG
GCGGCGCCCGATCTGATCGAGGCCGAGGTCGAGGGCGCGGATGGCAGCTGGTCCAACGTGCTGGCCTGCAGCGATATCGA
AACCCGCATTGCGGCGCTCTCATCGCCCACCTCGCGGCTGCGCATTCTGAACCCGTTCGACCCGGCCATCCGCGATCGCA
AGCGGCTGGCGCGGCTGTTTGGCTTTGACTACACAGTTGAAATGTTTGTGCCCGCCGCCAAACGACAGTGGGGGTATTAC
ATCTACCCGCTCTTGGAGGGCAGCCGCCTGGTGGGCCGCGCCGAGATCAAGGGCGATCGCAGCAAGGGTACGCTCACGCT
CAGCAAACTTTGGATGGAACATCCGCATTTGAAGACGCCCAAACGCCTGCAGAAACTTGATGCGGAACTTGGCCGCCTTG
CACGACTCGCGGGTCTGCAGAGGGTGATCTGGGCCGTGGAATAG

Upstream 100 bases:

>100_bases
CCGTGTCCCGGCGCGTCGGGGCGCTCTTGCGGACCGCTAGAAACGGCTTTCCTCCTCCCTCTTTGTGTGAAACAAAGGGG
GAACACGGAGGCGCTGCTGA

Downstream 100 bases:

>100_bases
GCGGCTTTGCACTCGGTCCGCTTTGGGCCGCGCGCTTGGCCCCGACGCTTTTGCGCCTAGCCTTTGGGACGGGCGGCTTT
CTCCGCAAGGCCGCTCAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MARLKIDNRTARSLWLQLHGLAQTPTGPLDVLGLIEQLGFVQLDTIQVVSRAHHHILWSRNQNYREPMLDPLLRTHRQVF
EHFTHDASVLPMAFLPMWQRQFARKKHQVSRSNWFGKHLDPELISDVLRRITEDGPLSTKDFETRRADRTAMWTRPPHKM
VLDYLWYAGELATSHREGFTKYYDLAERVYPQDVPQLSDQAQVQGLCHAALDRIGFGTLGQIRKFWEACAVEEVARWAEE
AAPDLIEAEVEGADGSWSNVLACSDIETRIAALSSPTSRLRILNPFDPAIRDRKRLARLFGFDYTVEMFVPAAKRQWGYY
IYPLLEGSRLVGRAEIKGDRSKGTLTLSKLWMEHPHLKTPKRLQKLDAELGRLARLAGLQRVIWAVE

Sequences:

>Translated_387_residues
MARLKIDNRTARSLWLQLHGLAQTPTGPLDVLGLIEQLGFVQLDTIQVVSRAHHHILWSRNQNYREPMLDPLLRTHRQVF
EHFTHDASVLPMAFLPMWQRQFARKKHQVSRSNWFGKHLDPELISDVLRRITEDGPLSTKDFETRRADRTAMWTRPPHKM
VLDYLWYAGELATSHREGFTKYYDLAERVYPQDVPQLSDQAQVQGLCHAALDRIGFGTLGQIRKFWEACAVEEVARWAEE
AAPDLIEAEVEGADGSWSNVLACSDIETRIAALSSPTSRLRILNPFDPAIRDRKRLARLFGFDYTVEMFVPAAKRQWGYY
IYPLLEGSRLVGRAEIKGDRSKGTLTLSKLWMEHPHLKTPKRLQKLDAELGRLARLAGLQRVIWAVE
>Mature_386_residues
ARLKIDNRTARSLWLQLHGLAQTPTGPLDVLGLIEQLGFVQLDTIQVVSRAHHHILWSRNQNYREPMLDPLLRTHRQVFE
HFTHDASVLPMAFLPMWQRQFARKKHQVSRSNWFGKHLDPELISDVLRRITEDGPLSTKDFETRRADRTAMWTRPPHKMV
LDYLWYAGELATSHREGFTKYYDLAERVYPQDVPQLSDQAQVQGLCHAALDRIGFGTLGQIRKFWEACAVEEVARWAEEA
APDLIEAEVEGADGSWSNVLACSDIETRIAALSSPTSRLRILNPFDPAIRDRKRLARLFGFDYTVEMFVPAAKRQWGYYI
YPLLEGSRLVGRAEIKGDRSKGTLTLSKLWMEHPHLKTPKRLQKLDAELGRLARLAGLQRVIWAVE

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=368, Percent_Identity=31.5217391304348, Blast_Score=145, Evalue=6e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 44605; Mature: 44474

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLKIDNRTARSLWLQLHGLAQTPTGPLDVLGLIEQLGFVQLDTIQVVSRAHHHILWSR
CCEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHEEECC
NQNYREPMLDPLLRTHRQVFEHFTHDASVLPMAFLPMWQRQFARKKHQVSRSNWFGKHLD
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PELISDVLRRITEDGPLSTKDFETRRADRTAMWTRPPHKMVLDYLWYAGELATSHREGFT
HHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KYYDLAERVYPQDVPQLSDQAQVQGLCHAALDRIGFGTLGQIRKFWEACAVEEVARWAEE
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAPDLIEAEVEGADGSWSNVLACSDIETRIAALSSPTSRLRILNPFDPAIRDRKRLARLF
HCCHHHHHHCCCCCCCCCCEEEECHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHH
GFDYTVEMFVPAAKRQWGYYIYPLLEGSRLVGRAEIKGDRSKGTLTLSKLWMEHPHLKTP
CCCCCHHHHCCHHHHCCCEEEEEEECCCCCEEHHHCCCCCCCCCCHHHHHHHCCCCCCCH
KRLQKLDAELGRLARLAGLQRVIWAVE
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARLKIDNRTARSLWLQLHGLAQTPTGPLDVLGLIEQLGFVQLDTIQVVSRAHHHILWSR
CEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHEEECC
NQNYREPMLDPLLRTHRQVFEHFTHDASVLPMAFLPMWQRQFARKKHQVSRSNWFGKHLD
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PELISDVLRRITEDGPLSTKDFETRRADRTAMWTRPPHKMVLDYLWYAGELATSHREGFT
HHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KYYDLAERVYPQDVPQLSDQAQVQGLCHAALDRIGFGTLGQIRKFWEACAVEEVARWAEE
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAPDLIEAEVEGADGSWSNVLACSDIETRIAALSSPTSRLRILNPFDPAIRDRKRLARLF
HCCHHHHHHCCCCCCCCCCEEEECHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHH
GFDYTVEMFVPAAKRQWGYYIYPLLEGSRLVGRAEIKGDRSKGTLTLSKLWMEHPHLKTP
CCCCCHHHHCCHHHHCCCEEEEEEECCCCCEEHHHCCCCCCCCCCHHHHHHHCCCCCCCH
KRLQKLDAELGRLARLAGLQRVIWAVE
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]