| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081869
Identifier: 99081869
GI number: 99081869
Start: 2137758
End: 2138666
Strand: Direct
Name: 99081869
Synonym: TM1040_2029
Alternate gene names: NA
Gene position: 2137758-2138666 (Clockwise)
Preceding gene: 99081868
Following gene: 99081871
Centisome position: 66.79
GC content: 53.8
Gene sequence:
>909_bases ATGAGCGAAGAGACGACCGGACAGCTCCCGGATGTTCTGTGGCATTACACGACATTCGATACGCTTACGGCGATTCTTAC TTCTCAATGCCTTCTGGCCAGCGACTTTCGCGACACCAACGACCGCGAGGAAATCCTGTTTGGTTTCAAAGCCCTGCGAG ACGCGTTTGGGACTCACAACACTTGGAACACCACTGAAGGCTTTGCAGATCCCGTGTCTGCAGCAATCCGAGAGAACGAG GAGCGTATCATAGAGGACCTGGAATCTAGCTTCTTGCACGGTCAGATGATCTGTCTGTCCAGCGCAAGGGATTCCCTGTC GATGTGGCGCGGATACGGTCAGCTCACCAATGGCGGCGGCAATGGCGCAGTGGCGATCGGGTTTTGCGCTGCAGACCTGC AAACCTTCTGTGGCCCAAGCGATGCAACGCTTCAATCTTCGACCGCGCACATCCAGCAAAACGCCTCAGGTGGGTTTGAA GGGCCAAGCAATGTTGACTATGCCTTCAGAAATTTCCCGCAACTTTCAAATGCACTTTCAAACGAGGATTACTCGGCCGA CTTTCACCTCAAGTGGACGCATTACTTGGCCCATTGGATGAAGCACCGCAAACATCCCGCATTTGCCGAAGAACGAGAGT ATCGAATTTGGGGGCATGCCTATGACGGCAACGACAAAGGTAACAGCCAACACGTAGTCTTTGTCGGCAACCACGATCGC CGCAAATTCCACTTGGCGCCGGCACCGGACGACATCCTCGGGCCGCTCACACATCCGTTGGCCATCCAGAAGATCATGGT CGGGCCAAAAACCGACTTCGCAAAAGTCGAGCGTTTCACCAGAAACGTCTTCCAATCTTACACCCACGATCGGCCCGATA TGTGCGCCTCAAAAATTCCCTTCAAATAG
Upstream 100 bases:
>100_bases CCAAGGATCTGCTGGTCGAACTGGAATGACCCAGGCCCCATGCTAAAATTCAGCCGCAGCTCCCCATCGGGGCTGCGGCT TTTTCATTTGGGGAATTCAC
Downstream 100 bases:
>100_bases TCACAACACCAGCCTGAACTTCATAAACGGCCTGCCTGCGTGCTCCACATCCGGCAGACGTTCTGCCCCCAGACGCCGCA GCGCTCCGAGATGACGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSEETTGQLPDVLWHYTTFDTLTAILTSQCLLASDFRDTNDREEILFGFKALRDAFGTHNTWNTTEGFADPVSAAIRENE ERIIEDLESSFLHGQMICLSSARDSLSMWRGYGQLTNGGGNGAVAIGFCAADLQTFCGPSDATLQSSTAHIQQNASGGFE GPSNVDYAFRNFPQLSNALSNEDYSADFHLKWTHYLAHWMKHRKHPAFAEEREYRIWGHAYDGNDKGNSQHVVFVGNHDR RKFHLAPAPDDILGPLTHPLAIQKIMVGPKTDFAKVERFTRNVFQSYTHDRPDMCASKIPFK
Sequences:
>Translated_302_residues MSEETTGQLPDVLWHYTTFDTLTAILTSQCLLASDFRDTNDREEILFGFKALRDAFGTHNTWNTTEGFADPVSAAIRENE ERIIEDLESSFLHGQMICLSSARDSLSMWRGYGQLTNGGGNGAVAIGFCAADLQTFCGPSDATLQSSTAHIQQNASGGFE GPSNVDYAFRNFPQLSNALSNEDYSADFHLKWTHYLAHWMKHRKHPAFAEEREYRIWGHAYDGNDKGNSQHVVFVGNHDR RKFHLAPAPDDILGPLTHPLAIQKIMVGPKTDFAKVERFTRNVFQSYTHDRPDMCASKIPFK >Mature_301_residues SEETTGQLPDVLWHYTTFDTLTAILTSQCLLASDFRDTNDREEILFGFKALRDAFGTHNTWNTTEGFADPVSAAIRENEE RIIEDLESSFLHGQMICLSSARDSLSMWRGYGQLTNGGGNGAVAIGFCAADLQTFCGPSDATLQSSTAHIQQNASGGFEG PSNVDYAFRNFPQLSNALSNEDYSADFHLKWTHYLAHWMKHRKHPAFAEEREYRIWGHAYDGNDKGNSQHVVFVGNHDRR KFHLAPAPDDILGPLTHPLAIQKIMVGPKTDFAKVERFTRNVFQSYTHDRPDMCASKIPFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33954; Mature: 33823
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEETTGQLPDVLWHYTTFDTLTAILTSQCLLASDFRDTNDREEILFGFKALRDAFGTHN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC TWNTTEGFADPVSAAIRENEERIIEDLESSFLHGQMICLSSARDSLSMWRGYGQLTNGGG CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCCC NGAVAIGFCAADLQTFCGPSDATLQSSTAHIQQNASGGFEGPSNVDYAFRNFPQLSNALS CCEEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHC NEDYSADFHLKWTHYLAHWMKHRKHPAFAEEREYRIWGHAYDGNDKGNSQHVVFVGNHDR CCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCC RKFHLAPAPDDILGPLTHPLAIQKIMVGPKTDFAKVERFTRNVFQSYTHDRPDMCASKIP EEEECCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCC FK CC >Mature Secondary Structure SEETTGQLPDVLWHYTTFDTLTAILTSQCLLASDFRDTNDREEILFGFKALRDAFGTHN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC TWNTTEGFADPVSAAIRENEERIIEDLESSFLHGQMICLSSARDSLSMWRGYGQLTNGGG CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCCC NGAVAIGFCAADLQTFCGPSDATLQSSTAHIQQNASGGFEGPSNVDYAFRNFPQLSNALS CCEEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHC NEDYSADFHLKWTHYLAHWMKHRKHPAFAEEREYRIWGHAYDGNDKGNSQHVVFVGNHDR CCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCC RKFHLAPAPDDILGPLTHPLAIQKIMVGPKTDFAKVERFTRNVFQSYTHDRPDMCASKIP EEEECCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCC FK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA