| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is mrp [H]
Identifier: 99081862
GI number: 99081862
Start: 2126599
End: 2127684
Strand: Reverse
Name: mrp [H]
Synonym: TM1040_2022
Alternate gene names: 99081862
Gene position: 2127684-2126599 (Counterclockwise)
Preceding gene: 99081864
Following gene: 99081861
Centisome position: 66.47
GC content: 66.67
Gene sequence:
>1086_bases ATGCCCGTCACACAGGAAGAGATTCGCGCCGCTTTGGACCGTCTGGAGCTTCCGGGTGGGGGCACATTGGTGTCACGCGA CATGCTGCGCGCCCTCTCCATCGAGGGCAGCACAGTGAGATTCGTGATCGAGGCGGCCTCACCGGAAGAGGCCTCCAAGA TGGAGATGCTGCGCCGGGCGGCAGAGGCTTCGGTCAAGGCGCTGCCCGGTGTCGAGACGGTCGCGGTGGTGCTTACGGCG CATGGTCCCGCTGCGCCGACCAAATCGGCGCAAAAACCTGCGCCGAGCCTCAAGCTGGGTGGCCATCCTAAACCGCAGGC TGCGCCGATGAAACCCTCGGGCGTGAAACGCATCCTCGCGGTGGGATCGGGCAAGGGTGGCGTTGGCAAATCCACCGTGA GCGCCAACCTCGCGGTGGCGCTGGCCCGGCAGGGGCGCAAGGTCGGGCTCTTGGACGCTGACATCTACGGCCCCTCGCAG CCACGCATGATGGGGGTCTCCGGTCGCCCCGCCAGCCCCGATGGCACCACCATCGAGCCGCTCCATGCCCATGGGGTCAC GGTGATGTCGATCGGCCTCATGGTGGAGGAGCGCAAGGCCGTGGTCTGGCGCGGCCCGATGCTTATGGGCGCACTCCAGC AGATGCTGGGGCAGGTGAACTGGGGCGAGCTTGACGTGTTGATCGTCGACCTGCCGCCGGGCACAGGCGATGTGCAACTC ACGCTCTGCACCAAGGCCGAGCTGTCGGGGGCCATCGTGGTCTCCACCCCGCAGGATGTGGCCCTTCTGGATGCGCGCAA GGCGCTTGATATGTTCGACACGCTCAAAACCCCGGTGCTGGGCCTCATAGAGAACATGTCCTTCTTTACCTGCCCCGATT GCGGCGGCACCCATCACATCTTTGGCAACGGCGGTGTTGCCGCAGAAGCCAAGGACCTGGGCCTGCCGCTCCTCGGGGCC CTGCCGATTGATCTGGAGACCCGGCTGGCGGGCGACAGCGGCACGCCCATCGCAGCCGGAGAGGGCGTCATGGCCGAGGC CTACGCGCGTATCGCCAAGGGGCTGGTCGAAGGCGGCATGGCGTGA
Upstream 100 bases:
>100_bases GCCGGGGTGCCGCTCTGGGCAATTTGATGCTTGGGCCGGGAGCGTCGCGTGTCTATATCAGCTCTGGCCCCCGAATACGG CAGAAACAGGAGTTGCCCGC
Downstream 100 bases:
>100_bases ATGGTCAGGAGAGACGCGGATGGTGTTTTCAATGGTCTGGGCATGGTGGAGGCAGCAAGCCAAAGGTACGCCCACAATAG GTTCTGTGAACGCCCGCAGG
Product: putative Mrp (multidrug resistance-associated proteins) family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MPVTQEEIRAALDRLELPGGGTLVSRDMLRALSIEGSTVRFVIEAASPEEASKMEMLRRAAEASVKALPGVETVAVVLTA HGPAAPTKSAQKPAPSLKLGGHPKPQAAPMKPSGVKRILAVGSGKGGVGKSTVSANLAVALARQGRKVGLLDADIYGPSQ PRMMGVSGRPASPDGTTIEPLHAHGVTVMSIGLMVEERKAVVWRGPMLMGALQQMLGQVNWGELDVLIVDLPPGTGDVQL TLCTKAELSGAIVVSTPQDVALLDARKALDMFDTLKTPVLGLIENMSFFTCPDCGGTHHIFGNGGVAAEAKDLGLPLLGA LPIDLETRLAGDSGTPIAAGEGVMAEAYARIAKGLVEGGMA
Sequences:
>Translated_361_residues MPVTQEEIRAALDRLELPGGGTLVSRDMLRALSIEGSTVRFVIEAASPEEASKMEMLRRAAEASVKALPGVETVAVVLTA HGPAAPTKSAQKPAPSLKLGGHPKPQAAPMKPSGVKRILAVGSGKGGVGKSTVSANLAVALARQGRKVGLLDADIYGPSQ PRMMGVSGRPASPDGTTIEPLHAHGVTVMSIGLMVEERKAVVWRGPMLMGALQQMLGQVNWGELDVLIVDLPPGTGDVQL TLCTKAELSGAIVVSTPQDVALLDARKALDMFDTLKTPVLGLIENMSFFTCPDCGGTHHIFGNGGVAAEAKDLGLPLLGA LPIDLETRLAGDSGTPIAAGEGVMAEAYARIAKGLVEGGMA >Mature_360_residues PVTQEEIRAALDRLELPGGGTLVSRDMLRALSIEGSTVRFVIEAASPEEASKMEMLRRAAEASVKALPGVETVAVVLTAH GPAAPTKSAQKPAPSLKLGGHPKPQAAPMKPSGVKRILAVGSGKGGVGKSTVSANLAVALARQGRKVGLLDADIYGPSQP RMMGVSGRPASPDGTTIEPLHAHGVTVMSIGLMVEERKAVVWRGPMLMGALQQMLGQVNWGELDVLIVDLPPGTGDVQLT LCTKAELSGAIVVSTPQDVALLDARKALDMFDTLKTPVLGLIENMSFFTCPDCGGTHHIFGNGGVAAEAKDLGLPLLGAL PIDLETRLAGDSGTPIAAGEGVMAEAYARIAKGLVEGGMA
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=252, Percent_Identity=49.6031746031746, Blast_Score=244, Evalue=8e-65, Organism=Homo sapiens, GI118572611, Length=218, Percent_Identity=43.5779816513761, Blast_Score=178, Evalue=7e-45, Organism=Homo sapiens, GI6912540, Length=225, Percent_Identity=42.6666666666667, Blast_Score=174, Evalue=1e-43, Organism=Escherichia coli, GI87082045, Length=243, Percent_Identity=50.6172839506173, Blast_Score=237, Evalue=7e-64, Organism=Caenorhabditis elegans, GI25143050, Length=256, Percent_Identity=41.015625, Blast_Score=175, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6322188, Length=221, Percent_Identity=39.8190045248869, Blast_Score=171, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6321347, Length=220, Percent_Identity=40.9090909090909, Blast_Score=160, Evalue=4e-40, Organism=Drosophila melanogaster, GI221511043, Length=242, Percent_Identity=38.4297520661157, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI24667611, Length=217, Percent_Identity=44.7004608294931, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI19921440, Length=254, Percent_Identity=41.3385826771654, Blast_Score=171, Evalue=5e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 37203; Mature: 37072
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTQEEIRAALDRLELPGGGTLVSRDMLRALSIEGSTVRFVIEAASPEEASKMEMLRRA CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHH AEASVKALPGVETVAVVLTAHGPAAPTKSAQKPAPSLKLGGHPKPQAAPMKPSGVKRILA HHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEE VGSGKGGVGKSTVSANLAVALARQGRKVGLLDADIYGPSQPRMMGVSGRPASPDGTTIEP ECCCCCCCCCCHHHHHHHEEEHHCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCEECC LHAHGVTVMSIGLMVEERKAVVWRGPMLMGALQQMLGQVNWGELDVLIVDLPPGTGDVQL HHHCCEEEEEEEEEEECCCEEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEE TLCTKAELSGAIVVSTPQDVALLDARKALDMFDTLKTPVLGLIENMSFFTCPDCGGTHHI EEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEE FGNGGVAAEAKDLGLPLLGALPIDLETRLAGDSGTPIAAGEGVMAEAYARIAKGLVEGGM ECCCCCEECHHHCCCCEECCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC A C >Mature Secondary Structure PVTQEEIRAALDRLELPGGGTLVSRDMLRALSIEGSTVRFVIEAASPEEASKMEMLRRA CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHH AEASVKALPGVETVAVVLTAHGPAAPTKSAQKPAPSLKLGGHPKPQAAPMKPSGVKRILA HHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEE VGSGKGGVGKSTVSANLAVALARQGRKVGLLDADIYGPSQPRMMGVSGRPASPDGTTIEP ECCCCCCCCCCHHHHHHHEEEHHCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCEECC LHAHGVTVMSIGLMVEERKAVVWRGPMLMGALQQMLGQVNWGELDVLIVDLPPGTGDVQL HHHCCEEEEEEEEEEECCCEEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEE TLCTKAELSGAIVVSTPQDVALLDARKALDMFDTLKTPVLGLIENMSFFTCPDCGGTHHI EEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEE FGNGGVAAEAKDLGLPLLGALPIDLETRLAGDSGTPIAAGEGVMAEAYARIAKGLVEGGM ECCCCCEECHHHCCCCEECCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]