Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081861

Identifier: 99081861

GI number: 99081861

Start: 2125506

End: 2126579

Strand: Reverse

Name: 99081861

Synonym: TM1040_2021

Alternate gene names: NA

Gene position: 2126579-2125506 (Counterclockwise)

Preceding gene: 99081862

Following gene: 99081853

Centisome position: 66.44

GC content: 57.45

Gene sequence:

>1074_bases
ATGGTGTTTTCAATGGTCTGGGCATGGTGGAGGCAGCAAGCCAAAGGTACGCCCACAATAGGTTCTGTGAACGCCCGCAG
GTATAAAGGTATCAAAGAAAGAGGGATGCAAGCTCTCCTGAATTGGTCATCGTATGACCAAATCTCGCAGATGGAGAGTT
CACTCACTGTGCAGCTTTTGCAGATGTCCGTTTTTGACTTTCATTCATCTATAGATCGAGGCGAAATGAATGACGCGCGA
GTGGCGCGTCTGCGCGACAGGGACATTGAGGCGCTGCAACAGATTCCAGATTTGGCGCAGGTCTTCATCTTGCATCACGA
TGGATATGTGCGCGAAGCGGCACTCAAACAGCTTGACGGTTCAGTCGGCGCTCCGGGATGCATCTACGCCCTGTTCTGGC
GCACAAATGATTGGGTGCATGAGGTGCGTGAGGCGGCCCACGAGGCTTTGGCGCGGGTACTGCCTCAGACATCTGCAGAG
GTCATTGTCCCGGCCATACGGGCGGCTCTTCCACGGATTGCCAGTTGGGGGCGCTGGTCGCAGGCAGGGCCAGGGAGGAT
CACGACACTCGCCCAAAGAGACGACGTGGCCAGCGCGTTGGTTGACGATGTGATTCAATCCGAGGGCGCGGCCCTCACGG
TCGTGTTTCGGGAACTGTGCAAGACCCCCAAGATTGACCCCCAGCTTGAGCGGATCTTTCGCAAAGCCCACCAACCGCAT
ATCCGGGGGATGGCTCTTCAGATCTTATTGTCGGGCAAGGCCAGATGGCCTTTACCTCAGCGCCGAAAGGTCTGGATCGA
CAAACCTTCGGGGCGCTCTCGTATGGAACTGCAATTCCAGAGCCGGGACATCACGGTCGACGCCGACGTCCTCGGGCTGT
TGCAAAGGGCTGTGACAGATCACGCCAGTATCGTGCGCAAACATGCGCTCGATGGGATGATCGCTCTGCGCCATGACCGC
GAGATGGCGCACACATTGGACACGCTGGTCGCGGGGCTTGAAGACGATCCCAACATCGGCGTCCGGTCCCGCGTTGCGTT
TTTTCAGTGCAAGCGGCGAGAAGAGAACCCGTAA

Upstream 100 bases:

>100_bases
CCCATCGCAGCCGGAGAGGGCGTCATGGCCGAGGCCTACGCGCGTATCGCCAAGGGGCTGGTCGAAGGCGGCATGGCGTG
AATGGTCAGGAGAGACGCGG

Downstream 100 bases:

>100_bases
CAGGTCCTTTCCCGTTGCGCCCCCACCGCGCGCTCTGCTCAGGGTGTTTTCACCCCATTGCCCTATGCTGGCGGGTGTCG
CGACATATTACCGGAGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MVFSMVWAWWRQQAKGTPTIGSVNARRYKGIKERGMQALLNWSSYDQISQMESSLTVQLLQMSVFDFHSSIDRGEMNDAR
VARLRDRDIEALQQIPDLAQVFILHHDGYVREAALKQLDGSVGAPGCIYALFWRTNDWVHEVREAAHEALARVLPQTSAE
VIVPAIRAALPRIASWGRWSQAGPGRITTLAQRDDVASALVDDVIQSEGAALTVVFRELCKTPKIDPQLERIFRKAHQPH
IRGMALQILLSGKARWPLPQRRKVWIDKPSGRSRMELQFQSRDITVDADVLGLLQRAVTDHASIVRKHALDGMIALRHDR
EMAHTLDTLVAGLEDDPNIGVRSRVAFFQCKRREENP

Sequences:

>Translated_357_residues
MVFSMVWAWWRQQAKGTPTIGSVNARRYKGIKERGMQALLNWSSYDQISQMESSLTVQLLQMSVFDFHSSIDRGEMNDAR
VARLRDRDIEALQQIPDLAQVFILHHDGYVREAALKQLDGSVGAPGCIYALFWRTNDWVHEVREAAHEALARVLPQTSAE
VIVPAIRAALPRIASWGRWSQAGPGRITTLAQRDDVASALVDDVIQSEGAALTVVFRELCKTPKIDPQLERIFRKAHQPH
IRGMALQILLSGKARWPLPQRRKVWIDKPSGRSRMELQFQSRDITVDADVLGLLQRAVTDHASIVRKHALDGMIALRHDR
EMAHTLDTLVAGLEDDPNIGVRSRVAFFQCKRREENP
>Mature_357_residues
MVFSMVWAWWRQQAKGTPTIGSVNARRYKGIKERGMQALLNWSSYDQISQMESSLTVQLLQMSVFDFHSSIDRGEMNDAR
VARLRDRDIEALQQIPDLAQVFILHHDGYVREAALKQLDGSVGAPGCIYALFWRTNDWVHEVREAAHEALARVLPQTSAE
VIVPAIRAALPRIASWGRWSQAGPGRITTLAQRDDVASALVDDVIQSEGAALTVVFRELCKTPKIDPQLERIFRKAHQPH
IRGMALQILLSGKARWPLPQRRKVWIDKPSGRSRMELQFQSRDITVDADVLGLLQRAVTDHASIVRKHALDGMIALRHDR
EMAHTLDTLVAGLEDDPNIGVRSRVAFFQCKRREENP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40429; Mature: 40429

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFSMVWAWWRQQAKGTPTIGSVNARRYKGIKERGMQALLNWSSYDQISQMESSLTVQLL
CHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QMSVFDFHSSIDRGEMNDARVARLRDRDIEALQQIPDLAQVFILHHDGYVREAALKQLDG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHCC
SVGAPGCIYALFWRTNDWVHEVREAAHEALARVLPQTSAEVIVPAIRAALPRIASWGRWS
CCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
QAGPGRITTLAQRDDVASALVDDVIQSEGAALTVVFRELCKTPKIDPQLERIFRKAHQPH
CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCH
IRGMALQILLSGKARWPLPQRRKVWIDKPSGRSRMELQFQSRDITVDADVLGLLQRAVTD
HHHHHHHHEECCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCEEECHHHHHHHHHHHHH
HASIVRKHALDGMIALRHDREMAHTLDTLVAGLEDDPNIGVRSRVAFFQCKRREENP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVFSMVWAWWRQQAKGTPTIGSVNARRYKGIKERGMQALLNWSSYDQISQMESSLTVQLL
CHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QMSVFDFHSSIDRGEMNDARVARLRDRDIEALQQIPDLAQVFILHHDGYVREAALKQLDG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHCC
SVGAPGCIYALFWRTNDWVHEVREAAHEALARVLPQTSAEVIVPAIRAALPRIASWGRWS
CCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
QAGPGRITTLAQRDDVASALVDDVIQSEGAALTVVFRELCKTPKIDPQLERIFRKAHQPH
CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCH
IRGMALQILLSGKARWPLPQRRKVWIDKPSGRSRMELQFQSRDITVDADVLGLLQRAVTD
HHHHHHHHEECCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCEEECHHHHHHHHHHHHH
HASIVRKHALDGMIALRHDREMAHTLDTLVAGLEDDPNIGVRSRVAFFQCKRREENP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA