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The map label for this gene is ygbL [C]

Identifier: 99081847

GI number: 99081847

Start: 2112570

End: 2113298

Strand: Direct

Name: ygbL [C]

Synonym: TM1040_2007

Alternate gene names: 99081847

Gene position: 2112570-2113298 (Clockwise)

Preceding gene: 99081846

Following gene: 99081849

Centisome position: 66.0

GC content: 64.2

Gene sequence:

>729_bases
ATGACCCTCACACGCGCCCTCCCCGATGCCGAGGCCCAGTTGCGGACCGATCTCGCAGATGCCTTTCGGATCTGTCACAT
GCTGGGCTGGTCCGAAAGTGTCGGCAACCACTTCAGCGCGGCCGTCTCCGCTGACGGGCAGTCATTCCTGCTCAACGCCA
AGTGGCAGCACTTCGACACCATCGCGCCCGAGGATCTGCTGCTTTTGGACAGCCGCACCGCAGAGACGCCCCCCGATGTC
GATGCCTCGGCCTGGTGCGTGCATGGCACTCTGCACCGCCGCCTGCCCGATGCGCGCGTGGTGCTGCATGCCCATTCGCC
CTATGCAACGGCGCTGGCCTGCCTCGAGGATCCCACCATGGTTCCAATCGACAACAATACCGCCCGCTTTTACGGGCGCA
CCGCCTATGACATGTCCTTTGGCGGCATTGCGGATGCCACCGAGGAAGGCGAACGCCTGGCGGAGGCGCTTGGCGACAAA
TCCGTGCTGGTGATGGGAAATCACGGGGTCAGCATCGTGGGCGACACCGTGGCAGAGGCGTTCGAGGATCTCTACTTCTT
TGAAAAGGCTGCGCAAACACTGATTCTCGCCCGCTCCACCGGGGCACGCCTCGCGGTCCTCACGGATGCTGTGGCCCAGA
ACACCGCCGATGGCTGGCGCGCCTATCAGGGGATGGCGGCCAAACATTTTGCCTATCTGCGCAGCAGGTTGCCGCCCCTG
CCCGGCTGA

Upstream 100 bases:

>100_bases
CCGCCTCCAGTGGTGACCGGTATCTGCGCGGCTGCTACGTGGATCGCTCCGAGATGCGCTCCACCTATCGTGCATTGGTC
AGCGAAGGACGGTTCAAGGC

Downstream 100 bases:

>100_bases
CCTGACCCAAAGGGCCTCGCCTCGCCTTGGCAAAACTGAACGGAGCGCGCCTGCCCCGCCGCAATTTCTGCCGGGCAGGC
GTTTTAACGAATGCCGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTLTRALPDAEAQLRTDLADAFRICHMLGWSESVGNHFSAAVSADGQSFLLNAKWQHFDTIAPEDLLLLDSRTAETPPDV
DASAWCVHGTLHRRLPDARVVLHAHSPYATALACLEDPTMVPIDNNTARFYGRTAYDMSFGGIADATEEGERLAEALGDK
SVLVMGNHGVSIVGDTVAEAFEDLYFFEKAAQTLILARSTGARLAVLTDAVAQNTADGWRAYQGMAAKHFAYLRSRLPPL
PG

Sequences:

>Translated_242_residues
MTLTRALPDAEAQLRTDLADAFRICHMLGWSESVGNHFSAAVSADGQSFLLNAKWQHFDTIAPEDLLLLDSRTAETPPDV
DASAWCVHGTLHRRLPDARVVLHAHSPYATALACLEDPTMVPIDNNTARFYGRTAYDMSFGGIADATEEGERLAEALGDK
SVLVMGNHGVSIVGDTVAEAFEDLYFFEKAAQTLILARSTGARLAVLTDAVAQNTADGWRAYQGMAAKHFAYLRSRLPPL
PG
>Mature_241_residues
TLTRALPDAEAQLRTDLADAFRICHMLGWSESVGNHFSAAVSADGQSFLLNAKWQHFDTIAPEDLLLLDSRTAETPPDVD
ASAWCVHGTLHRRLPDARVVLHAHSPYATALACLEDPTMVPIDNNTARFYGRTAYDMSFGGIADATEEGERLAEALGDKS
VLVMGNHGVSIVGDTVAEAFEDLYFFEKAAQTLILARSTGARLAVLTDAVAQNTADGWRAYQGMAAKHFAYLRSRLPPLP
G

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family [H]

Homologues:

Organism=Homo sapiens, GI89276787, Length=201, Percent_Identity=25.3731343283582, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI297307160, Length=201, Percent_Identity=25.3731343283582, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI9257190, Length=203, Percent_Identity=25.1231527093596, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI297307158, Length=201, Percent_Identity=25.3731343283582, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI9257192, Length=201, Percent_Identity=25.3731343283582, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI29826323, Length=178, Percent_Identity=28.0898876404494, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI29826325, Length=178, Percent_Identity=28.0898876404494, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI29826321, Length=182, Percent_Identity=28.021978021978, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI29826319, Length=182, Percent_Identity=28.021978021978, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115533218, Length=192, Percent_Identity=26.5625, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI115533216, Length=192, Percent_Identity=26.5625, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 26245; Mature: 26114

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTRALPDAEAQLRTDLADAFRICHMLGWSESVGNHFSAAVSADGQSFLLNAKWQHFDT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCHHEEEEECCCCEEEEECCCCCCCC
IAPEDLLLLDSRTAETPPDVDASAWCVHGTLHRRLPDARVVLHAHSPYATALACLEDPTM
CCCCCEEEECCCCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCE
VPIDNNTARFYGRTAYDMSFGGIADATEEGERLAEALGDKSVLVMGNHGVSIVGDTVAEA
EEECCCCCEEECCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEHHHHHHH
FEDLYFFEKAAQTLILARSTGARLAVLTDAVAQNTADGWRAYQGMAAKHFAYLRSRLPPL
HHHHHHHHHHHHHEEEEECCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
PG
CC
>Mature Secondary Structure 
TLTRALPDAEAQLRTDLADAFRICHMLGWSESVGNHFSAAVSADGQSFLLNAKWQHFDT
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCHHEEEEECCCCEEEEECCCCCCCC
IAPEDLLLLDSRTAETPPDVDASAWCVHGTLHRRLPDARVVLHAHSPYATALACLEDPTM
CCCCCEEEECCCCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCE
VPIDNNTARFYGRTAYDMSFGGIADATEEGERLAEALGDKSVLVMGNHGVSIVGDTVAEA
EEECCCCCEEECCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEHHHHHHH
FEDLYFFEKAAQTLILARSTGARLAVLTDAVAQNTADGWRAYQGMAAKHFAYLRSRLPPL
HHHHHHHHHHHHHEEEEECCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
PG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]