Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081849

Identifier: 99081849

GI number: 99081849

Start: 2114021

End: 2114866

Strand: Direct

Name: 99081849

Synonym: TM1040_2009

Alternate gene names: NA

Gene position: 2114021-2114866 (Clockwise)

Preceding gene: 99081847

Following gene: 99081851

Centisome position: 66.04

GC content: 65.96

Gene sequence:

>846_bases
ATGACCACCCGCTTCATCCCCGCCACGCCCGCCGCGCGCCCCATCGACCAGGATGACCCGCTTGAGGATTTCGAGCGCCG
CGAGGTCGCGCTTCTCGGCCTCACCAAGACGGTCTATGTGGCGGGCGCGGGTCCCGCGGTGATCGTGATGCACGAGCTGC
CGGGGATCTCGCCGCAAGTGGCCCGCTTTGCGCGATGGGTCAGGGAGGCCGGCTTCACCGTCTACATGCCCTCGCTTTTT
GGGCGCGATGGCGCCGTCGCACAGGCCGACGAAGGCGCAGAGGTCTTTAAACGAGTCTGCATCTCGCGCGAGTTTCGGGT
CATGGCGGGGATGGGCACCAGCCCGGTTGTGGCATGGCTGCGCGCCCTCGCCAGCGAGGCTCATGAGGCCTGTGGCGGTA
TCGGCGTCGGCGCCGTTGGCATGTGCCTCACTGGAAACTTCGCGCTCTCGATGATGATCGAACCCGCCATGCAGGCCCCC
GTGCTCTGCCAGCCATCGCTCCCGCTTGACGATCCGGGCGCCATTGCCATGAGTGACGAAGAAGCCGCCGCCGTCCGCGC
ACGCATGGATCAGGACGATCTGACCGCACAGCTCTACCGGTTCGAAGGGGACAGCTTCTGCCGCGCGGAGCGGCTCGCGG
CCTATTTCGACCGGTTTGGGGACCGCCTCACGGAGAAAACCCTGCCCGACAGCGCCGCCAATCCGTCTCCCGCGCCCTTC
TTCAACGCCCATGTGCCAACACCGCATTCGGTTGTCACACAGCACCTGATCGATGCAGCCGGAACAGAAACCGTCAAGGC
CGTCGAGGAGATTATCGCGTTTCTGCGCAGCCGGTTGCACCCCTGA

Upstream 100 bases:

>100_bases
GGTGTCTGGCTGGCGGGAGGAGGCACATCTGAGTTTGACATATGGACTTAGGCTCTCTACGCGACAATCTGAGTACATAA
TTTAGACCGAGGAGCCCCAT

Downstream 100 bases:

>100_bases
TGCCCCGCTGACCCACAGCCCCGCTGACACCGGGCGTGCAAAACACCGTGCCGGTATGACACGCCCAATTCGCCCGGCGC
AACCTTTGGGGCCAGCGATC

Product: dienelactone hydrolase family protein

Products: NA

Alternate protein names: Dienelactone Hydrolase Family Protein; Esterase Lipase Family Protein; Dienelactone Hydrolase Protein

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTTRFIPATPAARPIDQDDPLEDFERREVALLGLTKTVYVAGAGPAVIVMHELPGISPQVARFARWVREAGFTVYMPSLF
GRDGAVAQADEGAEVFKRVCISREFRVMAGMGTSPVVAWLRALASEAHEACGGIGVGAVGMCLTGNFALSMMIEPAMQAP
VLCQPSLPLDDPGAIAMSDEEAAAVRARMDQDDLTAQLYRFEGDSFCRAERLAAYFDRFGDRLTEKTLPDSAANPSPAPF
FNAHVPTPHSVVTQHLIDAAGTETVKAVEEIIAFLRSRLHP

Sequences:

>Translated_281_residues
MTTRFIPATPAARPIDQDDPLEDFERREVALLGLTKTVYVAGAGPAVIVMHELPGISPQVARFARWVREAGFTVYMPSLF
GRDGAVAQADEGAEVFKRVCISREFRVMAGMGTSPVVAWLRALASEAHEACGGIGVGAVGMCLTGNFALSMMIEPAMQAP
VLCQPSLPLDDPGAIAMSDEEAAAVRARMDQDDLTAQLYRFEGDSFCRAERLAAYFDRFGDRLTEKTLPDSAANPSPAPF
FNAHVPTPHSVVTQHLIDAAGTETVKAVEEIIAFLRSRLHP
>Mature_280_residues
TTRFIPATPAARPIDQDDPLEDFERREVALLGLTKTVYVAGAGPAVIVMHELPGISPQVARFARWVREAGFTVYMPSLFG
RDGAVAQADEGAEVFKRVCISREFRVMAGMGTSPVVAWLRALASEAHEACGGIGVGAVGMCLTGNFALSMMIEPAMQAPV
LCQPSLPLDDPGAIAMSDEEAAAVRARMDQDDLTAQLYRFEGDSFCRAERLAAYFDRFGDRLTEKTLPDSAANPSPAPFF
NAHVPTPHSVVTQHLIDAAGTETVKAVEEIIAFLRSRLHP

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30318; Mature: 30187

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRFIPATPAARPIDQDDPLEDFERREVALLGLTKTVYVAGAGPAVIVMHELPGISPQV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEEEEECCCCEEEEEECCCCCCHHH
ARFARWVREAGFTVYMPSLFGRDGAVAQADEGAEVFKRVCISREFRVMAGMGTSPVVAWL
HHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHEECCCCHHHHHHH
RALASEAHEACGGIGVGAVGMCLTGNFALSMMIEPAMQAPVLCQPSLPLDDPGAIAMSDE
HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCEEECCH
EAAAVRARMDQDDLTAQLYRFEGDSFCRAERLAAYFDRFGDRLTEKTLPDSAANPSPAPF
HHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
FNAHVPTPHSVVTQHLIDAAGTETVKAVEEIIAFLRSRLHP
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTRFIPATPAARPIDQDDPLEDFERREVALLGLTKTVYVAGAGPAVIVMHELPGISPQV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEEEEECCCCEEEEEECCCCCCHHH
ARFARWVREAGFTVYMPSLFGRDGAVAQADEGAEVFKRVCISREFRVMAGMGTSPVVAWL
HHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHEECCCCHHHHHHH
RALASEAHEACGGIGVGAVGMCLTGNFALSMMIEPAMQAPVLCQPSLPLDDPGAIAMSDE
HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCEEECCH
EAAAVRARMDQDDLTAQLYRFEGDSFCRAERLAAYFDRFGDRLTEKTLPDSAANPSPAPF
HHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
FNAHVPTPHSVVTQHLIDAAGTETVKAVEEIIAFLRSRLHP
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA