Click here to switch to the map view.

The map label for this gene is fnr [H]

Identifier: 99081791

GI number: 99081791

Start: 2053848

End: 2054516

Strand: Direct

Name: fnr [H]

Synonym: TM1040_1951

Alternate gene names: 99081791

Gene position: 2053848-2054516 (Clockwise)

Preceding gene: 99081790

Following gene: 99081792

Centisome position: 64.16

GC content: 64.13

Gene sequence:

>669_bases
ATGGCTGCCGCTCCTCTCCCTGCCTCCAGCTTTCTGTCCGGGGCCTCGGAGCGCCTGCGGGCCATGCTCGACAGCCAAGC
CACAGATGTTCATCTCGAAACGGGCGATGTGCTCTTTGAGCGCGGCGACGAGGGCGACGCGCTTTATGCGATCATCTCTG
GCGCTCTTGAGATCTCCACCCTTTCCGCAGCGGGGCGCAAGCTCTCGCTTGATATGATGCGCCCGGGGGCGATCTTTGGT
GAGATCGCAATGTTCGATCCCGGCGAGCGCACCGCCACCGCCACCGCCGCTGAACCAAGCCACCTGCGCCGCCTGCGTCA
CAGGGACGTGCTGGCGCAGTTGACCAAGCATCCCGAACTTGCGGGTGATATGCTGAAGCTCGCGGGGCAGCGCATGCGCT
GGATGAATACACAACTCAATGAGCAAGTGTTCCTCCCCATGCCGGTGCGTCTGGCGCGCAAGCTCCTCTATCTCACGCCC
GCGGATGGCAACGGCCAGCTGAGCCTCTCGCAATCGGAACTGGCCGAATTCGTCGGCGCCACCCGCGAAGCGGTCTCAAA
GACCCTGTCGAACTGGCGCAAGGCGGGCCTCATCGAGATCAGCCGCGGAGGACTGCACCTCAAAGATCGCGGCGGGCTGG
CGGTTCTGGCCGACCCCGAAGGCATCTAA

Upstream 100 bases:

>100_bases
GCGCAAACATTCAAGATCCCACCTGCCAGCTTGCGCGGGCGCGATTAGCCGCTTACAACCCCGGGGCCAGTATCACTCAT
CTGCCCCTCGGAGATTTCTC

Downstream 100 bases:

>100_bases
ACACCCCAACCGCACACCCTGAGCGGCATCACGCGCCCTTTTGGGGCAGTTTTGCGGTCGGTCTTTAGAAGTCTCCAGGC
GCCCAAAAGGCTCTCTTCAA

Product: Crp/FNR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MAAAPLPASSFLSGASERLRAMLDSQATDVHLETGDVLFERGDEGDALYAIISGALEISTLSAAGRKLSLDMMRPGAIFG
EIAMFDPGERTATATAAEPSHLRRLRHRDVLAQLTKHPELAGDMLKLAGQRMRWMNTQLNEQVFLPMPVRLARKLLYLTP
ADGNGQLSLSQSELAEFVGATREAVSKTLSNWRKAGLIEISRGGLHLKDRGGLAVLADPEGI

Sequences:

>Translated_222_residues
MAAAPLPASSFLSGASERLRAMLDSQATDVHLETGDVLFERGDEGDALYAIISGALEISTLSAAGRKLSLDMMRPGAIFG
EIAMFDPGERTATATAAEPSHLRRLRHRDVLAQLTKHPELAGDMLKLAGQRMRWMNTQLNEQVFLPMPVRLARKLLYLTP
ADGNGQLSLSQSELAEFVGATREAVSKTLSNWRKAGLIEISRGGLHLKDRGGLAVLADPEGI
>Mature_221_residues
AAAPLPASSFLSGASERLRAMLDSQATDVHLETGDVLFERGDEGDALYAIISGALEISTLSAAGRKLSLDMMRPGAIFGE
IAMFDPGERTATATAAEPSHLRRLRHRDVLAQLTKHPELAGDMLKLAGQRMRWMNTQLNEQVFLPMPVRLARKLLYLTPA
DGNGQLSLSQSELAEFVGATREAVSKTLSNWRKAGLIEISRGGLHLKDRGGLAVLADPEGI

Specific function: It is involved in the activation of genes necessary for anaerobic respiration [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 23958; Mature: 23827

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS00889 CNMP_BINDING_2 ; PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAPLPASSFLSGASERLRAMLDSQATDVHLETGDVLFERGDEGDALYAIISGALEIST
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCEEHEEHHHHHHEEH
LSAAGRKLSLDMMRPGAIFGEIAMFDPGERTATATAAEPSHLRRLRHRDVLAQLTKHPEL
HHHCCCEEEEECCCCCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCHH
AGDMLKLAGQRMRWMNTQLNEQVFLPMPVRLARKLLYLTPADGNGQLSLSQSELAEFVGA
HHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHEEEEECCCCCCEEEECHHHHHHHHHH
TREAVSKTLSNWRKAGLIEISRGGLHLKDRGGLAVLADPEGI
HHHHHHHHHHHHHHCCCEEEECCCEEEECCCCEEEEECCCCC
>Mature Secondary Structure 
AAAPLPASSFLSGASERLRAMLDSQATDVHLETGDVLFERGDEGDALYAIISGALEIST
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCEEHEEHHHHHHEEH
LSAAGRKLSLDMMRPGAIFGEIAMFDPGERTATATAAEPSHLRRLRHRDVLAQLTKHPEL
HHHCCCEEEEECCCCCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCHH
AGDMLKLAGQRMRWMNTQLNEQVFLPMPVRLARKLLYLTPADGNGQLSLSQSELAEFVGA
HHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHEEEEECCCCCCEEEECHHHHHHHHHH
TREAVSKTLSNWRKAGLIEISRGGLHLKDRGGLAVLADPEGI
HHHHHHHHHHHHHHCCCEEEECCCEEEECCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8846791; 9384377 [H]