The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081771

Identifier: 99081771

GI number: 99081771

Start: 2029664

End: 2030617

Strand: Direct

Name: 99081771

Synonym: TM1040_1930

Alternate gene names: NA

Gene position: 2029664-2030617 (Clockwise)

Preceding gene: 99081770

Following gene: 99081780

Centisome position: 63.41

GC content: 63.31

Gene sequence:

>954_bases
GTGAATCCCGACACCGATACCGTATTGAGGCCGCGCCCCTTGGGCGCGGTTCTCGCCATGGGGGCTGCGCTCTTGCTTGG
CGGGTGTCTGGCGCTGGCGCCCGGCCCCAAGGACACGCCGCGCCCCACTCCACGCCCTGTTGCGCCGGTTTATACGCCGT
CGGTGGAATCGCAGACCTTGGCGAAATACTATGCCGATCTCGAGCAGGATCTTTTGACCCGTGGGCTCTTGCGCACGGAT
GGCGGCGGGCCAGAGACGCCCTATGACGCCGAAGATCTCGCAGAACGCTTTGAAACCCTTGCGTTTTACGACGAATACGC
GAGCGCCACTGATGGCGGTGCTGGGGGTATGGGACGCTGGGAACGGCCCGTGCAGCTGGTCCCTGTCTTTGGCCCGTCGG
TGACGCCGGCGCAGGAAGCGCGTGACCGCGCCTCCCTGACCGCCTATGCCGCCCGGCTGGCACGGATCACCGGGCATCCG
ATCACCGTCGGCACGAGCGGCAACTTTACCGTGCTCTTTGCCGGTATTGATGACGCGGATTTTGTCGAAACCAAAGTGCG
CCGCCTGCTGCCAAACCTGTCGGACCGGGATGTGGCACTCTTTGCGACACCGCCGCGTAAATTCTATTGTCTGGTGTTTG
CAGGCGGCCCCCAGAGCGATCCGCTGAACTACACCCGCGGTGTTGCCCTGATCCGCGCGGAGCAGCCCAATTTGATGCGG
GAGAGCTGTATCCACGAGGAAATCGCCCAGGGGCTTGGGCTGCGCAATGACAGCCCCAAGGCACGGCCATCGATTTTCAA
CGACGACGACGAGTTTGCCCGCCTCACCAGCCATGATGAGAAACTCTTGCAGATGCTTTACGACCGGCGTCTTCGGGTCG
GAATGAGCGCAGAAGAGGCCCGCCCGGCCATCGAACGCATGGCCCGGGAGGTCATGGGAGAGCTCTCAAACTAG

Upstream 100 bases:

>100_bases
ATGGAAGCCGAGCTGCGCGACACGCTGGCAGCTGCCAAAGCGCGCAAGGATGGGGTCGGCGACACGGCGGCCACCTCGGT
TCCAAAGTGAGCCTGCCCGC

Downstream 100 bases:

>100_bases
AGAACGTCAGACCAACGGGGCCTCAACCCTGCGGGATCTCATTGACATGATCGGGCAAATGATATCCGCGCTGCACGGCC
GGACGGGCCGCAATGGCCTG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNPDTDTVLRPRPLGAVLAMGAALLLGGCLALAPGPKDTPRPTPRPVAPVYTPSVESQTLAKYYADLEQDLLTRGLLRTD
GGGPETPYDAEDLAERFETLAFYDEYASATDGGAGGMGRWERPVQLVPVFGPSVTPAQEARDRASLTAYAARLARITGHP
ITVGTSGNFTVLFAGIDDADFVETKVRRLLPNLSDRDVALFATPPRKFYCLVFAGGPQSDPLNYTRGVALIRAEQPNLMR
ESCIHEEIAQGLGLRNDSPKARPSIFNDDDEFARLTSHDEKLLQMLYDRRLRVGMSAEEARPAIERMAREVMGELSN

Sequences:

>Translated_317_residues
MNPDTDTVLRPRPLGAVLAMGAALLLGGCLALAPGPKDTPRPTPRPVAPVYTPSVESQTLAKYYADLEQDLLTRGLLRTD
GGGPETPYDAEDLAERFETLAFYDEYASATDGGAGGMGRWERPVQLVPVFGPSVTPAQEARDRASLTAYAARLARITGHP
ITVGTSGNFTVLFAGIDDADFVETKVRRLLPNLSDRDVALFATPPRKFYCLVFAGGPQSDPLNYTRGVALIRAEQPNLMR
ESCIHEEIAQGLGLRNDSPKARPSIFNDDDEFARLTSHDEKLLQMLYDRRLRVGMSAEEARPAIERMAREVMGELSN
>Mature_317_residues
MNPDTDTVLRPRPLGAVLAMGAALLLGGCLALAPGPKDTPRPTPRPVAPVYTPSVESQTLAKYYADLEQDLLTRGLLRTD
GGGPETPYDAEDLAERFETLAFYDEYASATDGGAGGMGRWERPVQLVPVFGPSVTPAQEARDRASLTAYAARLARITGHP
ITVGTSGNFTVLFAGIDDADFVETKVRRLLPNLSDRDVALFATPPRKFYCLVFAGGPQSDPLNYTRGVALIRAEQPNLMR
ESCIHEEIAQGLGLRNDSPKARPSIFNDDDEFARLTSHDEKLLQMLYDRRLRVGMSAEEARPAIERMAREVMGELSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34591; Mature: 34591

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPDTDTVLRPRPLGAVLAMGAALLLGGCLALAPGPKDTPRPTPRPVAPVYTPSVESQTL
CCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
AKYYADLEQDLLTRGLLRTDGGGPETPYDAEDLAERFETLAFYDEYASATDGGAGGMGRW
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ERPVQLVPVFGPSVTPAQEARDRASLTAYAARLARITGHPITVGTSGNFTVLFAGIDDAD
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCHH
FVETKVRRLLPNLSDRDVALFATPPRKFYCLVFAGGPQSDPLNYTRGVALIRAEQPNLMR
HHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHCCEEEEEECCCCHHH
ESCIHEEIAQGLGLRNDSPKARPSIFNDDDEFARLTSHDEKLLQMLYDRRLRVGMSAEEA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RPAIERMAREVMGELSN
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNPDTDTVLRPRPLGAVLAMGAALLLGGCLALAPGPKDTPRPTPRPVAPVYTPSVESQTL
CCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
AKYYADLEQDLLTRGLLRTDGGGPETPYDAEDLAERFETLAFYDEYASATDGGAGGMGRW
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ERPVQLVPVFGPSVTPAQEARDRASLTAYAARLARITGHPITVGTSGNFTVLFAGIDDAD
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCHH
FVETKVRRLLPNLSDRDVALFATPPRKFYCLVFAGGPQSDPLNYTRGVALIRAEQPNLMR
HHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHCCEEEEEECCCCHHH
ESCIHEEIAQGLGLRNDSPKARPSIFNDDDEFARLTSHDEKLLQMLYDRRLRVGMSAEEA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RPAIERMAREVMGELSN
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA