| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081770
Identifier: 99081770
GI number: 99081770
Start: 2028463
End: 2029653
Strand: Direct
Name: 99081770
Synonym: TM1040_1929
Alternate gene names: NA
Gene position: 2028463-2029653 (Clockwise)
Preceding gene: 99081769
Following gene: 99081771
Centisome position: 63.37
GC content: 61.04
Gene sequence:
>1191_bases ATGTCTGAAACGATTCAACAAAAAGCAGTAGAAGCCGAAACGCTGGTGAAGGAAGTAACCGAAGTGTCCCTGCCCGACCC CAAGGGCGAGCTGGCCACGCTCGAGGCCGCCGACCCGGAAACCACCACAGCGATCCGCCGCCGCATCGACGAGATCGACA TGGGCGATACCAATTCGATCATCTCCTTTGGCTCTGCCGCGCAGGGTGAACTGCAACAGATCTCGCAGGCGATGCTGACG GATGTGCGCAACAAGGACGTGGGGCCTGCAGGTGACTCCCTGCGCGAGATCGTCACCACCATCCGCGGCTTTTCCGTCTC TGAACTCGACGTGCGCCGCAAACCAACCTTCTGGGAACGTCTTCTGGGGCGCGCGGCCCCCTTTGCCAAGTTCACCGCCC GTTATGAAAGCGTGCAGGGGCAAATCGACAAGATCACCGATAGCCTTCTGGCGCATGAGCATACGCTCCTGAAGGACATC AAGTCCCTCGACGTTCTCTATGAAAAGACGCTGAATTTCTACGACGAGCTGGCGCTCTATATTGCGGCGGGCGAGGCAAA GCTGGCCGAGCTCGACAGCACCGAAATCCCCGCGCTCGAGGCAGCTGTGGAAGCCGCGGCTGAGAACGATCAGGTCATCA AGGCGCAGGAGCTGCGCGACCTGCGCGCGGCCCGCGACGATCTGGAACGCCGCGTGCACGACCTGAAACTCACGCGTCAG GTGACGATGCAGTCCCTGCCCTCTATCCGACTGGTGCAGGAAAACGACAAGTCTCTGGTCACCAAGATCAACTCCACGCT CGTCAATACCGTGCCGCTCTGGGAGACCCAGTTGGCGCAGGCTGTCACGATCCAGCGGTCTGCCGAGGCCGCAAATGCGG TGCGCGATGCCAACAACCTCACCAATGAACTGCTGACCGCCAATGCCGCAAACCTGCGCGAGAGCAACAAGGTCATCCGC GAGGAAATGGAGCGTGGCGTCTTTGACATCGAAGCGGTCAAACAGGCCAATGCCGACCTGATCGGCACCATCGAGGAAAG CCTGCAGATCGCCGATGAGGGCAAGCGCAAGCGGGCCGAGGCCGAGGCCGATCTGAAGAAAATGGAAGCCGAGCTGCGCG ACACGCTGGCAGCTGCCAAAGCGCGCAAGGATGGGGTCGGCGACACGGCGGCCACCTCGGTTCCAAAGTGA
Upstream 100 bases:
>100_bases GGCGATCTGAATATTGAAATTGATGTGTTGCGCGCCCGGCTGGAGCGCGAAGGCGTCCAGTTGGACCGCCCCTCTTAACC TGACAGGAAAGGCCTGGCCG
Downstream 100 bases:
>100_bases GCCTGCCCGCGTGAATCCCGACACCGATACCGTATTGAGGCCGCGCCCCTTGGGCGCGGTTCTCGCCATGGGGGCTGCGC TCTTGCTTGGCGGGTGTCTG
Product: toxic anion resistance
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSETIQQKAVEAETLVKEVTEVSLPDPKGELATLEAADPETTTAIRRRIDEIDMGDTNSIISFGSAAQGELQQISQAMLT DVRNKDVGPAGDSLREIVTTIRGFSVSELDVRRKPTFWERLLGRAAPFAKFTARYESVQGQIDKITDSLLAHEHTLLKDI KSLDVLYEKTLNFYDELALYIAAGEAKLAELDSTEIPALEAAVEAAAENDQVIKAQELRDLRAARDDLERRVHDLKLTRQ VTMQSLPSIRLVQENDKSLVTKINSTLVNTVPLWETQLAQAVTIQRSAEAANAVRDANNLTNELLTANAANLRESNKVIR EEMERGVFDIEAVKQANADLIGTIEESLQIADEGKRKRAEAEADLKKMEAELRDTLAAAKARKDGVGDTAATSVPK
Sequences:
>Translated_396_residues MSETIQQKAVEAETLVKEVTEVSLPDPKGELATLEAADPETTTAIRRRIDEIDMGDTNSIISFGSAAQGELQQISQAMLT DVRNKDVGPAGDSLREIVTTIRGFSVSELDVRRKPTFWERLLGRAAPFAKFTARYESVQGQIDKITDSLLAHEHTLLKDI KSLDVLYEKTLNFYDELALYIAAGEAKLAELDSTEIPALEAAVEAAAENDQVIKAQELRDLRAARDDLERRVHDLKLTRQ VTMQSLPSIRLVQENDKSLVTKINSTLVNTVPLWETQLAQAVTIQRSAEAANAVRDANNLTNELLTANAANLRESNKVIR EEMERGVFDIEAVKQANADLIGTIEESLQIADEGKRKRAEAEADLKKMEAELRDTLAAAKARKDGVGDTAATSVPK >Mature_395_residues SETIQQKAVEAETLVKEVTEVSLPDPKGELATLEAADPETTTAIRRRIDEIDMGDTNSIISFGSAAQGELQQISQAMLTD VRNKDVGPAGDSLREIVTTIRGFSVSELDVRRKPTFWERLLGRAAPFAKFTARYESVQGQIDKITDSLLAHEHTLLKDIK SLDVLYEKTLNFYDELALYIAAGEAKLAELDSTEIPALEAAVEAAAENDQVIKAQELRDLRAARDDLERRVHDLKLTRQV TMQSLPSIRLVQENDKSLVTKINSTLVNTVPLWETQLAQAVTIQRSAEAANAVRDANNLTNELLTANAANLRESNKVIRE EMERGVFDIEAVKQANADLIGTIEESLQIADEGKRKRAEAEADLKKMEAELRDTLAAAKARKDGVGDTAATSVPK
Specific function: Unknown
COG id: COG3853
COG function: function code P; Uncharacterized protein involved in tellurite resistance
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the telA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008863 [H]
Pfam domain/function: PF05816 TelA [H]
EC number: NA
Molecular weight: Translated: 43604; Mature: 43472
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETIQQKAVEAETLVKEVTEVSLPDPKGELATLEAADPETTTAIRRRIDEIDMGDTNSI CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHH ISFGSAAQGELQQISQAMLTDVRNKDVGPAGDSLREIVTTIRGFSVSELDVRRKPTFWER HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCHHHHH LLGRAAPFAKFTARYESVQGQIDKITDSLLAHEHTLLKDIKSLDVLYEKTLNFYDELALY HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAGEAKLAELDSTEIPALEAAVEAAAENDQVIKAQELRDLRAARDDLERRVHDLKLTRQ HCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTMQSLPSIRLVQENDKSLVTKINSTLVNTVPLWETQLAQAVTIQRSAEAANAVRDANNL HHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TNELLTANAANLRESNKVIREEMERGVFDIEAVKQANADLIGTIEESLQIADEGKRKRAE HHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH AEADLKKMEAELRDTLAAAKARKDGVGDTAATSVPK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SETIQQKAVEAETLVKEVTEVSLPDPKGELATLEAADPETTTAIRRRIDEIDMGDTNSI CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHH ISFGSAAQGELQQISQAMLTDVRNKDVGPAGDSLREIVTTIRGFSVSELDVRRKPTFWER HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCHHHHH LLGRAAPFAKFTARYESVQGQIDKITDSLLAHEHTLLKDIKSLDVLYEKTLNFYDELALY HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAGEAKLAELDSTEIPALEAAVEAAAENDQVIKAQELRDLRAARDDLERRVHDLKLTRQ HCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTMQSLPSIRLVQENDKSLVTKINSTLVNTVPLWETQLAQAVTIQRSAEAANAVRDANNL HHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TNELLTANAANLRESNKVIREEMERGVFDIEAVKQANADLIGTIEESLQIADEGKRKRAE HHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH AEADLKKMEAELRDTLAAAKARKDGVGDTAATSVPK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA