| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081722
Identifier: 99081722
GI number: 99081722
Start: 1980254
End: 1980664
Strand: Direct
Name: 99081722
Synonym: TM1040_1881
Alternate gene names: NA
Gene position: 1980254-1980664 (Clockwise)
Preceding gene: 99081720
Following gene: 99081726
Centisome position: 61.86
GC content: 50.61
Gene sequence:
>411_bases ATGCGAGCCGTTTCTTCCATGACAGACCTGTATTTGACCGAGCCTGACTTCGAAGCTGAGATTACGATCCTTACCGAAGA GCAGCGAGGGCGCCAAACGCCGCCACACAACTACATTCGCTGGGATTTCGGCTATGCAGAGGACAATCCTCTAGAGCCAG AGCGCAATCTGGATGCAGAAATCTACATGATTTGGCCAAATTTTCTGGATACCGAAGGCACACCTATTCAGAAGGGCATC CCGCTTGTAGGAACATACAAGGCTTGGATGCACATCTTGGTGAGAGAAATGGTGTGCTACCACCGGAAACGGATATCGGT TGGTCTAAAATTCAATTGCTATGAAGGCGGCCAGATCGTGGCAAGAGGGGTCGTAACAGAGCTTCGGGCCATTTCGCTCA ACGGCAACTAA
Upstream 100 bases:
>100_bases TGATCGGGCACAGGGAGAGGAGTAAAAGGACAGCTTTCAAATCGGGGTGGTCTGCTTTGAGCCCTTCACAGCTATAAAGC GTTGTTCGCTGGCTCGGATT
Downstream 100 bases:
>100_bases ATACCGCTTTCCGACCACAATGACTTTCAGGCATGTCTATAAAAAACCGCCCCTCTGCGGATGCAGGGGGCGGCTAGGCG TGACTAACAGTGCAGGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MRAVSSMTDLYLTEPDFEAEITILTEEQRGRQTPPHNYIRWDFGYAEDNPLEPERNLDAEIYMIWPNFLDTEGTPIQKGI PLVGTYKAWMHILVREMVCYHRKRISVGLKFNCYEGGQIVARGVVTELRAISLNGN
Sequences:
>Translated_136_residues MRAVSSMTDLYLTEPDFEAEITILTEEQRGRQTPPHNYIRWDFGYAEDNPLEPERNLDAEIYMIWPNFLDTEGTPIQKGI PLVGTYKAWMHILVREMVCYHRKRISVGLKFNCYEGGQIVARGVVTELRAISLNGN >Mature_136_residues MRAVSSMTDLYLTEPDFEAEITILTEEQRGRQTPPHNYIRWDFGYAEDNPLEPERNLDAEIYMIWPNFLDTEGTPIQKGI PLVGTYKAWMHILVREMVCYHRKRISVGLKFNCYEGGQIVARGVVTELRAISLNGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15722; Mature: 15722
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVSSMTDLYLTEPDFEAEITILTEEQRGRQTPPHNYIRWDFGYAEDNPLEPERNLDAE CCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEE IYMIWPNFLDTEGTPIQKGIPLVGTYKAWMHILVREMVCYHRKRISVGLKFNCYEGGQIV EEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHEEECEEEEEECCCEEE ARGVVTELRAISLNGN EHHHHHEEEEEEECCC >Mature Secondary Structure MRAVSSMTDLYLTEPDFEAEITILTEEQRGRQTPPHNYIRWDFGYAEDNPLEPERNLDAE CCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEE IYMIWPNFLDTEGTPIQKGIPLVGTYKAWMHILVREMVCYHRKRISVGLKFNCYEGGQIV EEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHEEECEEEEEECCCEEE ARGVVTELRAISLNGN EHHHHHEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA