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The map label for this gene is 99081720

Identifier: 99081720

GI number: 99081720

Start: 1978118

End: 1979593

Strand: Direct

Name: 99081720

Synonym: TM1040_1879

Alternate gene names: NA

Gene position: 1978118-1979593 (Clockwise)

Preceding gene: 99081719

Following gene: 99081722

Centisome position: 61.8

GC content: 62.47

Gene sequence:

>1476_bases
ATGGGCACGGTTATAACCAGTGCGGCTTGCCAGAGTGAGTTTGCAGTTATACAAATGAACTCAGCTCAATTTGCAAAGGC
AAGCCACATGGCCACCCAAAAGCTCTATGCCGGGGCGAAGCTGCGCGAGATGCGCAATCGGATCGGCCTCACGCAAAAGG
ACTTTGCCGCCAAGCTCGGCGTCTCGCTGCCCTATCTGAACCAGATGGAGAACAACAACCGGCCTGTGTCCACCACGGTC
GTCCTGGCGCTGGCGCAGGAGTTCGGGCTGGATGTGACAGAGCTGTCGTCTGGAGATAGCGAACGGTTGATCTCTGACAT
GCGCGAGGCCATGGCCGATCCGGTCTTTGCCGATGATGTGCCGCCCCTGGCCGATCTGCGCCTCACTGCGTCAAACGCCC
CCGCCCTCGCCCGCGCTTTCCTGAGCCTGCACCGCGCTTACCGTCAAACCCACGAGCGGCTTGCCTCGCTGGATGAGGCG
CTGGGGCGTGCCGATGCGCGCATTCAGGCCAGCCCCTGGGAAGAGGTGCGCGACTTCTTTCATTACTGCGACAACTATAT
CGACGCCGTGGACCGCGCGGCCGAGCGGTTCTCGGGCAGTGGCGACACCCGCCAAAACGCGGAGACCGCCCTGCAAGAGA
TCGGCGTGACCCTGACCCTGCGCGACATGGAGGGGTTGCGCGCCTATGATCCCGACACCAAAGTGCTGGCGCTGTCGCAT
CGCTCCGCGCCGCAAACGCGGCTGTTTCAGATGCTCTTGCAACTGGCGCTTTTGCGCTACGGCGATCTTCTGGAGGCGAC
GCTCGATTTTGCAAAATTCCAGACCGATGAGGCCCGTTCGATTGCAAAGATCGGCCTTGCAAATTACTTCGCCGGCGCAG
CCCTGATGCCCTACACAAGGTTTCTGGAGGCGGCACAGGCCTGCCGGCATGACCTGGAGCTGTTGTCGATCCGCTTTGGG
GCCTCGATCGAGCAGGTGGCGCATCGCCTGTCGACCCTGCAACGTCCCGGCGCCAAGGGCATTCCGTTTTTCTTTGTGCG
CGTCGATCAGGCGGGCACGATCACCAAGCGCCATTCGGCCACACGGTTGCAGTTTGCCCGTTTTGGCGGCGCGTGTCCTT
TGTGGAACGTCCACCGCGCCTTTGAAACACCGGGGCGGTTTTTGCGACAGCTCGCCGAGACTCCCGACGGGGTGCGCTAT
ATCTCGCTGGCGCGGGATGTCTCCAAACCGGGCGGATCCTTCGGCGCACCGGTGCGGCGCTATGCGATCTCGCTGGGCTG
CGAAGTCAGCCACGCGGATGCGTTGGTCTTTGCGGATGGGCTTGATGTGACGCAGGCCTCGGCCTTTGAACCCATCGGCA
TCTCCTGCCGGATTTGCGAGCGCCAGCATTGTCACCAGCGCTCGGTGCCGCCGCTGGAGCGACGACTTTCGGTGGACACC
AACGAGCGCAGCGTGTTGCCCTACCGGGTCAATTGA

Upstream 100 bases:

>100_bases
TAGGGGCGCGCTTGCGCGCTTGGCCCAACTGCGGGCCTTGCTTTTTCAAAGCAGGGGCCGTGGGCGGGAGGTCTCCCCTC
GCCCTTTCGGGGAGCTCAAT

Downstream 100 bases:

>100_bases
ACGCAAAAAGGCCACCCCGCGTGAGGGCGGCCCGTGATGCGTCATCGCCTGAGATCAGGCTTTGGCCAGAATGCCCCAGA
TCTCATCCTTGAGAGCAGCG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MGTVITSAACQSEFAVIQMNSAQFAKASHMATQKLYAGAKLREMRNRIGLTQKDFAAKLGVSLPYLNQMENNNRPVSTTV
VLALAQEFGLDVTELSSGDSERLISDMREAMADPVFADDVPPLADLRLTASNAPALARAFLSLHRAYRQTHERLASLDEA
LGRADARIQASPWEEVRDFFHYCDNYIDAVDRAAERFSGSGDTRQNAETALQEIGVTLTLRDMEGLRAYDPDTKVLALSH
RSAPQTRLFQMLLQLALLRYGDLLEATLDFAKFQTDEARSIAKIGLANYFAGAALMPYTRFLEAAQACRHDLELLSIRFG
ASIEQVAHRLSTLQRPGAKGIPFFFVRVDQAGTITKRHSATRLQFARFGGACPLWNVHRAFETPGRFLRQLAETPDGVRY
ISLARDVSKPGGSFGAPVRRYAISLGCEVSHADALVFADGLDVTQASAFEPIGISCRICERQHCHQRSVPPLERRLSVDT
NERSVLPYRVN

Sequences:

>Translated_491_residues
MGTVITSAACQSEFAVIQMNSAQFAKASHMATQKLYAGAKLREMRNRIGLTQKDFAAKLGVSLPYLNQMENNNRPVSTTV
VLALAQEFGLDVTELSSGDSERLISDMREAMADPVFADDVPPLADLRLTASNAPALARAFLSLHRAYRQTHERLASLDEA
LGRADARIQASPWEEVRDFFHYCDNYIDAVDRAAERFSGSGDTRQNAETALQEIGVTLTLRDMEGLRAYDPDTKVLALSH
RSAPQTRLFQMLLQLALLRYGDLLEATLDFAKFQTDEARSIAKIGLANYFAGAALMPYTRFLEAAQACRHDLELLSIRFG
ASIEQVAHRLSTLQRPGAKGIPFFFVRVDQAGTITKRHSATRLQFARFGGACPLWNVHRAFETPGRFLRQLAETPDGVRY
ISLARDVSKPGGSFGAPVRRYAISLGCEVSHADALVFADGLDVTQASAFEPIGISCRICERQHCHQRSVPPLERRLSVDT
NERSVLPYRVN
>Mature_490_residues
GTVITSAACQSEFAVIQMNSAQFAKASHMATQKLYAGAKLREMRNRIGLTQKDFAAKLGVSLPYLNQMENNNRPVSTTVV
LALAQEFGLDVTELSSGDSERLISDMREAMADPVFADDVPPLADLRLTASNAPALARAFLSLHRAYRQTHERLASLDEAL
GRADARIQASPWEEVRDFFHYCDNYIDAVDRAAERFSGSGDTRQNAETALQEIGVTLTLRDMEGLRAYDPDTKVLALSHR
SAPQTRLFQMLLQLALLRYGDLLEATLDFAKFQTDEARSIAKIGLANYFAGAALMPYTRFLEAAQACRHDLELLSIRFGA
SIEQVAHRLSTLQRPGAKGIPFFFVRVDQAGTITKRHSATRLQFARFGGACPLWNVHRAFETPGRFLRQLAETPDGVRYI
SLARDVSKPGGSFGAPVRRYAISLGCEVSHADALVFADGLDVTQASAFEPIGISCRICERQHCHQRSVPPLERRLSVDTN
ERSVLPYRVN

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 54371; Mature: 54240

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTVITSAACQSEFAVIQMNSAQFAKASHMATQKLYAGAKLREMRNRIGLTQKDFAAKLG
CCCEECCHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHC
VSLPYLNQMENNNRPVSTTVVLALAQEFGLDVTELSSGDSERLISDMREAMADPVFADDV
CCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
PPLADLRLTASNAPALARAFLSLHRAYRQTHERLASLDEALGRADARIQASPWEEVRDFF
CCHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHH
HYCDNYIDAVDRAAERFSGSGDTRQNAETALQEIGVTLTLRDMEGLRAYDPDTKVLALSH
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEC
RSAPQTRLFQMLLQLALLRYGDLLEATLDFAKFQTDEARSIAKIGLANYFAGAALMPYTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLEAAQACRHDLELLSIRFGASIEQVAHRLSTLQRPGAKGIPFFFVRVDQAGTITKRHSA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHCCH
TRLQFARFGGACPLWNVHRAFETPGRFLRQLAETPDGVRYISLARDVSKPGGSFGAPVRR
HHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHH
YAISLGCEVSHADALVFADGLDVTQASAFEPIGISCRICERQHCHQRSVPPLERRLSVDT
HHHHHCCEECCCCEEEEECCCCCCHHCCCCCCCCEEEECCHHHHHCCCCCCHHHHCCCCC
NERSVLPYRVN
CCCCCCCEECC
>Mature Secondary Structure 
GTVITSAACQSEFAVIQMNSAQFAKASHMATQKLYAGAKLREMRNRIGLTQKDFAAKLG
CCEECCHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHC
VSLPYLNQMENNNRPVSTTVVLALAQEFGLDVTELSSGDSERLISDMREAMADPVFADDV
CCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
PPLADLRLTASNAPALARAFLSLHRAYRQTHERLASLDEALGRADARIQASPWEEVRDFF
CCHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHH
HYCDNYIDAVDRAAERFSGSGDTRQNAETALQEIGVTLTLRDMEGLRAYDPDTKVLALSH
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEC
RSAPQTRLFQMLLQLALLRYGDLLEATLDFAKFQTDEARSIAKIGLANYFAGAALMPYTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLEAAQACRHDLELLSIRFGASIEQVAHRLSTLQRPGAKGIPFFFVRVDQAGTITKRHSA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHCCH
TRLQFARFGGACPLWNVHRAFETPGRFLRQLAETPDGVRYISLARDVSKPGGSFGAPVRR
HHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHH
YAISLGCEVSHADALVFADGLDVTQASAFEPIGISCRICERQHCHQRSVPPLERRLSVDT
HHHHHCCEECCCCEEEEECCCCCCHHCCCCCCCCEEEECCHHHHHCCCCCCHHHHCCCCC
NERSVLPYRVN
CCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]