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The map label for this gene is perM [C]

Identifier: 99081696

GI number: 99081696

Start: 1956344

End: 1957486

Strand: Direct

Name: perM [C]

Synonym: TM1040_1855

Alternate gene names: 99081696

Gene position: 1956344-1957486 (Clockwise)

Preceding gene: 99081695

Following gene: 99081697

Centisome position: 61.12

GC content: 62.9

Gene sequence:

>1143_bases
ATGGCTCTGCCCGCCCGCAAACAACTGAAATACTGGGGCATTGCCGCAGTTCTGTTCGCTGTCGTCATGTGGGCGCTCGG
CAATGTGCTGATGCCCTTCATCCTGGGCGGCGCCATCGCCTATATCATCGACCCGCTGGCCGACCGGCTGGAACGTGCGG
GCCTCAGCCGTGAGGGCGCAACCGCGGTGATCACGGTGGGGGCCGTGCTGATCTTTTTGATCCTGCTGCTGCTGATCGTG
CCGGCGCTGATCAACCAGATGATTGATCTGGTGCAGACGCTGCCGCAGGCGCTCTCCAACCTGCGCGCCTTTGCGCAGGA
GCGCTTTCCGTCGCTGTTTGAAGACAACAGCCAGCTGCGCGAGGCCCTTGCCGGGTTGTGGCAGATCATTCAGGACAAGA
GCGTCACCCTGCTGCAGACCTTTGTCGGCTCGGCGATGTCGCTGCTGAACATCGTGGTTCTGTTGGTGATCGTGCCGGTG
GTGGCCGTCTACCTGCTGGTGGACTGGGACCGGATGGTGGCGCGCATTGACGAGCTCTTGCCACGCGATCACGCGCCGGT
GGTGCGTCATCTGGCCAGCGAGATCGACAGGGTGCTATCGTCCTTTATCCGTGGCATGGGGTTGGTCTGCGTCATTCTTG
GCACCTATTACGCGGTGGCCCTGATGCTGGTGGGGCTGAATTTTGGCCTTGCGGTGGGCTTTGTCGCGGGGCTTGTGACC
TTCATTCCCTACCTCGGCGCCATCATCGGCGGCGTGCTCGCCATTGGTCTGGCGCTGTTCCAGTTCTGGGGCGCGCTTGA
GGGCGCGGACGGCGAGATGATCCGCCAGGGCACCGACTGGCTGCGCATTGCGCTGGTGGCGGGGATCTTTGCCATCGGCC
AGATGGTCGAAGGCAACTTCCTGACCCCAAAGCTCGTGGGCAACTCGGTCGGGCTGCACCCGGTCTGGCTCCTGCTGGCG
CTGTCGGTCTTTGGCGCGCTCTTTGGGTTTGTCGGCATGTTGGTCGCGGTGCCGGTGGCGGCAGTGATCGGGGTGGTTGC
ACGTTTCGCAGTAGAGCAGTATCTGCACAGTCGGCTCTATCAGGGGCTGTCACACCGGGATGCGAATGTCCGCACCTCCG
AGGATACACCGACCGACATCTGA

Upstream 100 bases:

>100_bases
GAGAGCCAAGCCGCCCAGCGGCCAACTCTCTCTTGCAACTGCACAGCGCATGGGCGATCACTGACGCATCCGTATCTTGC
CATCGCGAGGATGCCGCATC

Downstream 100 bases:

>100_bases
ACCGCGCCCCGCAAGCCACAGCCCCTCTCCCGCATGTAACAAGCAGACTGCCCATGTCCGAACAGCTGAGCTTTGATCTC
CCGGCGAAACCCGCGCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MALPARKQLKYWGIAAVLFAVVMWALGNVLMPFILGGAIAYIIDPLADRLERAGLSREGATAVITVGAVLIFLILLLLIV
PALINQMIDLVQTLPQALSNLRAFAQERFPSLFEDNSQLREALAGLWQIIQDKSVTLLQTFVGSAMSLLNIVVLLVIVPV
VAVYLLVDWDRMVARIDELLPRDHAPVVRHLASEIDRVLSSFIRGMGLVCVILGTYYAVALMLVGLNFGLAVGFVAGLVT
FIPYLGAIIGGVLAIGLALFQFWGALEGADGEMIRQGTDWLRIALVAGIFAIGQMVEGNFLTPKLVGNSVGLHPVWLLLA
LSVFGALFGFVGMLVAVPVAAVIGVVARFAVEQYLHSRLYQGLSHRDANVRTSEDTPTDI

Sequences:

>Translated_380_residues
MALPARKQLKYWGIAAVLFAVVMWALGNVLMPFILGGAIAYIIDPLADRLERAGLSREGATAVITVGAVLIFLILLLLIV
PALINQMIDLVQTLPQALSNLRAFAQERFPSLFEDNSQLREALAGLWQIIQDKSVTLLQTFVGSAMSLLNIVVLLVIVPV
VAVYLLVDWDRMVARIDELLPRDHAPVVRHLASEIDRVLSSFIRGMGLVCVILGTYYAVALMLVGLNFGLAVGFVAGLVT
FIPYLGAIIGGVLAIGLALFQFWGALEGADGEMIRQGTDWLRIALVAGIFAIGQMVEGNFLTPKLVGNSVGLHPVWLLLA
LSVFGALFGFVGMLVAVPVAAVIGVVARFAVEQYLHSRLYQGLSHRDANVRTSEDTPTDI
>Mature_379_residues
ALPARKQLKYWGIAAVLFAVVMWALGNVLMPFILGGAIAYIIDPLADRLERAGLSREGATAVITVGAVLIFLILLLLIVP
ALINQMIDLVQTLPQALSNLRAFAQERFPSLFEDNSQLREALAGLWQIIQDKSVTLLQTFVGSAMSLLNIVVLLVIVPVV
AVYLLVDWDRMVARIDELLPRDHAPVVRHLASEIDRVLSSFIRGMGLVCVILGTYYAVALMLVGLNFGLAVGFVAGLVTF
IPYLGAIIGGVLAIGLALFQFWGALEGADGEMIRQGTDWLRIALVAGIFAIGQMVEGNFLTPKLVGNSVGLHPVWLLLAL
SVFGALFGFVGMLVAVPVAAVIGVVARFAVEQYLHSRLYQGLSHRDANVRTSEDTPTDI

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=327, Percent_Identity=29.6636085626911, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI87082271, Length=322, Percent_Identity=25.1552795031056, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41037; Mature: 40905

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALPARKQLKYWGIAAVLFAVVMWALGNVLMPFILGGAIAYIIDPLADRLERAGLSREGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TAVITVGAVLIFLILLLLIVPALINQMIDLVQTLPQALSNLRAFAQERFPSLFEDNSQLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHH
EALAGLWQIIQDKSVTLLQTFVGSAMSLLNIVVLLVIVPVVAVYLLVDWDRMVARIDELL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PRDHAPVVRHLASEIDRVLSSFIRGMGLVCVILGTYYAVALMLVGLNFGLAVGFVAGLVT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIPYLGAIIGGVLAIGLALFQFWGALEGADGEMIRQGTDWLRIALVAGIFAIGQMVEGNF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LTPKLVGNSVGLHPVWLLLALSVFGALFGFVGMLVAVPVAAVIGVVARFAVEQYLHSRLY
CCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGLSHRDANVRTSEDTPTDI
HHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]