Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081639

Identifier: 99081639

GI number: 99081639

Start: 1890558

End: 1890881

Strand: Direct

Name: 99081639

Synonym: TM1040_1798

Alternate gene names: NA

Gene position: 1890558-1890881 (Clockwise)

Preceding gene: 99081634

Following gene: 99081640

Centisome position: 59.06

GC content: 58.95

Gene sequence:

>324_bases
ATGACCAAGACCGTTGTGGAAGTGGTGACCTTCAAGCTGAACCCCGGCGTCAGCGATGCAGACTATGTGGCCGCAAGCCA
GAAAACCGAGAGCTTTATTGGCGCGATGCGCGGCTTCATCGACCGTCGTCTCTCCAAGGGCGAAGACGGCACCTGGATGG
ACTATGTGGTCTGGGCCGATATGACTGCAGCGCAGGACGCCAGCGCCCAGTTCGAACAGGCAGAATGCGCCGCCGACCTG
ATGCAGATGATCGATCCAAAGACTCTCATGATGCGCCATGAGCACCAGATGTGGACCATGTCCCCAGCCTCCGCGATGGG
TTGA

Upstream 100 bases:

>100_bases
GCAGTTTTTTCAGAGCCGCCTCACCCAACTGACAGGTTTATGTCAGTTGCTCTTCCTTAAGACAGGCCCATCGAAACCGT
CAAGACAAGGAAGACGACAG

Downstream 100 bases:

>100_bases
CCTGATGGTGCGGCGCAGGTGAAAGATCATCCCATGCGCCGCACCGACCGCCTTTTTGAAATTATCCAGATCCTGCGCGA
CGGGAAATTGCACCGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTKTVVEVVTFKLNPGVSDADYVAASQKTESFIGAMRGFIDRRLSKGEDGTWMDYVVWADMTAAQDASAQFEQAECAADL
MQMIDPKTLMMRHEHQMWTMSPASAMG

Sequences:

>Translated_107_residues
MTKTVVEVVTFKLNPGVSDADYVAASQKTESFIGAMRGFIDRRLSKGEDGTWMDYVVWADMTAAQDASAQFEQAECAADL
MQMIDPKTLMMRHEHQMWTMSPASAMG
>Mature_106_residues
TKTVVEVVTFKLNPGVSDADYVAASQKTESFIGAMRGFIDRRLSKGEDGTWMDYVVWADMTAAQDASAQFEQAECAADLM
QMIDPKTLMMRHEHQMWTMSPASAMG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11904; Mature: 11773

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
10.3 %Met     (Translated Protein)
11.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
9.4 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTVVEVVTFKLNPGVSDADYVAASQKTESFIGAMRGFIDRRLSKGEDGTWMDYVVWAD
CCHHHEEHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHEECC
MTAAQDASAQFEQAECAADLMQMIDPKTLMMRHEHQMWTMSPASAMG
CHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCC
>Mature Secondary Structure 
TKTVVEVVTFKLNPGVSDADYVAASQKTESFIGAMRGFIDRRLSKGEDGTWMDYVVWAD
CHHHEEHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHEECC
MTAAQDASAQFEQAECAADLMQMIDPKTLMMRHEHQMWTMSPASAMG
CHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA