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The map label for this gene is 99081640

Identifier: 99081640

GI number: 99081640

Start: 1890915

End: 1891604

Strand: Direct

Name: 99081640

Synonym: TM1040_1799

Alternate gene names: NA

Gene position: 1890915-1891604 (Clockwise)

Preceding gene: 99081639

Following gene: 99081645

Centisome position: 59.07

GC content: 63.33

Gene sequence:

>690_bases
ATGCGCCGCACCGACCGCCTTTTTGAAATTATCCAGATCCTGCGCGACGGGAAATTGCACCGCGCGCAGGACATTGCCGC
GCGGCTCGAAGTGTCGACCCGGACCATTTACCGCGATATGGACACGCTTGTGGCCTCTGGCGTTCCGGTCGAAGGCGAGC
GCGGCGTCGGCTATATGGTGCGCGAAGCGATCACCCTGCCTCCGCTGACGCTGACCCCATCCGAGCTGGAGGCGCTCAAT
CTCGGCATGGCCATTGTCGCCGAAGCGGCCGATCCCGAACTCAAGTCCGCTGCCGAGAGCCTCGCCGCCAAGGTCGACGC
CGTGCTGCCGGTGGAAACCGTGGCCGAGGCAGAGGCGTGGAAATTTGCCGTCTATCCCTTTGGCGATGCGGCGCGTGGCT
TTGCCTGGATGCCCACCTTGCGGGCGGCGATCAAGGCGCGCCAGAAGCTGGCCCTGCGCTACCGGCGCATTGACCAGACC
CTGACCGAGCGGGTGATCCGCCCGCTTCATATGGAATATTGGGGGCGTGTCTGGACGCTGACGGCATGGTGCGAAACACG
AGGCGATTTTCGCGTCTTCCGCGTCGATCTCATTGAGACGGCCGAGGCCTTGCCTGAGCTTTTTGTAGATGAACCGGGCA
AACGCTTGCAGGATTATCAAGCCTGCGAGGATGCGCGTGAGGGCTCCTGA

Upstream 100 bases:

>100_bases
AAAGACTCTCATGATGCGCCATGAGCACCAGATGTGGACCATGTCCCCAGCCTCCGCGATGGGTTGACCTGATGGTGCGG
CGCAGGTGAAAGATCATCCC

Downstream 100 bases:

>100_bases
AGGGATCAGCCCAACTCGAAGCTTGTCACGCCATAGATAAGATCCCGCGCAACTTCGGGGCGACGTCCCCGGTACATGCG
CGCGGTTTCAAACACGGGCA

Product: helix-turn-helix, type 11

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; HTH Domain Family; DeoR-Family Transcriptional Regulator; Transcription Regulator Protein; Regulatory Protein; HTH Domain Protein; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; Transcription Regulator; HTH Domain-Containing Protein; Regulatory Protein DeoR; DeoR Family Transriptional Regulator; Transcription Regulator Protein DeoR Family; HTH Domain-Containing; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator-Like; Bacterial Regulatory Protein DeoR Family; Protein Containing HTH Domain; Transriptional Regulator DeoR Family; NB-Dependent Receptor; Regulatory Protein Deor; HTH Type; LOW QUALITY PROTEIN Helix-Turn-Helix Type

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MRRTDRLFEIIQILRDGKLHRAQDIAARLEVSTRTIYRDMDTLVASGVPVEGERGVGYMVREAITLPPLTLTPSELEALN
LGMAIVAEAADPELKSAAESLAAKVDAVLPVETVAEAEAWKFAVYPFGDAARGFAWMPTLRAAIKARQKLALRYRRIDQT
LTERVIRPLHMEYWGRVWTLTAWCETRGDFRVFRVDLIETAEALPELFVDEPGKRLQDYQACEDAREGS

Sequences:

>Translated_229_residues
MRRTDRLFEIIQILRDGKLHRAQDIAARLEVSTRTIYRDMDTLVASGVPVEGERGVGYMVREAITLPPLTLTPSELEALN
LGMAIVAEAADPELKSAAESLAAKVDAVLPVETVAEAEAWKFAVYPFGDAARGFAWMPTLRAAIKARQKLALRYRRIDQT
LTERVIRPLHMEYWGRVWTLTAWCETRGDFRVFRVDLIETAEALPELFVDEPGKRLQDYQACEDAREGS
>Mature_229_residues
MRRTDRLFEIIQILRDGKLHRAQDIAARLEVSTRTIYRDMDTLVASGVPVEGERGVGYMVREAITLPPLTLTPSELEALN
LGMAIVAEAADPELKSAAESLAAKVDAVLPVETVAEAEAWKFAVYPFGDAARGFAWMPTLRAAIKARQKLALRYRRIDQT
LTERVIRPLHMEYWGRVWTLTAWCETRGDFRVFRVDLIETAEALPELFVDEPGKRLQDYQACEDAREGS

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25848; Mature: 25848

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTDRLFEIIQILRDGKLHRAQDIAARLEVSTRTIYRDMDTLVASGVPVEGERGVGYMV
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
REAITLPPLTLTPSELEALNLGMAIVAEAADPELKSAAESLAAKVDAVLPVETVAEAEAW
HHHHCCCCCCCCHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHE
KFAVYPFGDAARGFAWMPTLRAAIKARQKLALRYRRIDQTLTERVIRPLHMEYWGRVWTL
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE
TAWCETRGDFRVFRVDLIETAEALPELFVDEPGKRLQDYQACEDAREGS
EEHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRTDRLFEIIQILRDGKLHRAQDIAARLEVSTRTIYRDMDTLVASGVPVEGERGVGYMV
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
REAITLPPLTLTPSELEALNLGMAIVAEAADPELKSAAESLAAKVDAVLPVETVAEAEAW
HHHHCCCCCCCCHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHE
KFAVYPFGDAARGFAWMPTLRAAIKARQKLALRYRRIDQTLTERVIRPLHMEYWGRVWTL
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE
TAWCETRGDFRVFRVDLIETAEALPELFVDEPGKRLQDYQACEDAREGS
EEHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA