The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081578

Identifier: 99081578

GI number: 99081578

Start: 1832077

End: 1833159

Strand: Reverse

Name: 99081578

Synonym: TM1040_1737

Alternate gene names: NA

Gene position: 1833159-1832077 (Counterclockwise)

Preceding gene: 99081579

Following gene: 99081577

Centisome position: 57.27

GC content: 66.11

Gene sequence:

>1083_bases
GTGCGGCACCTCCCAGGGATTGTGTTGGCGATCACGCTGGTTGCCCTTGCTGCGCTTGCGATCTGGCTCTGGGGGCTTGG
CGGCGCGGATCATATCCTGCGCGCGGCTTCCGAGGCGCAGCGTGATGCGCAAAACGCGATGGCACGGGGATTGCGCGCGC
TGAAAGGCGGCCAGCCCGGCGCATGGTGGGGGCTCATGGGGGTCTGTTTTGCCTATGGTTTTTTTCATGCGGCAGGTCCG
GGCCACGGCAAGCTGGTCATCGGCGGCTATGGTCTTGGCAGTGCGGTGACGCTTTGGCGGCTTTCGGCGCTGGCGGTGGC
GTCGTCGCTGGCGCAGGCGGCGACTGCGGTGCTCTTGGTGCTGTCTGGTGTGTGGCTGTTTGATTGGGGGCGAGAGCGCC
TGACGGCTACGGCAGAGGATCTGTTGGCACCGGTGTCTTATGCGCTGATGGCGCTTTTGGGCCTTTATCTGCTCTTGCGT
GGGTTGCGACGGGGCTGGCGGCTGCGCGCGGCTGAGGCCGGGCCGCACGCACATGCGGATCATCACCACGTGCCTGCAGG
GACAGGTGGTGCGCAGGACCATGCGCCTGTCGCCCTCCAGAGTGTCGGGACGCATCATAACCATCATCATGACCATCAGC
ATCATGACCATGATCACCACGATCATCATGACCACGGCCACAACCATCACGCCCATGGTCCGGGCGAAGTTTGCGCCAGT
TGCGGCCATCGCCACGGCCCAACCCTGCAGGAAGCGGCAAGCCTGCGCTCTTGGCGCGAGGCCGTGGCCATCATTCTGAG
CATTGCCGCGCGGCCCTGCACAGGGGCAGTGTTCCTGCTCCTGCTGACCTGGAGACTGGATGTGCTCGGGGCCGGTGTGG
CTGGGACTTTTGCGATGGGGCTTGGGACAGCGAGCGTCACCCTCTGCGTCGCGCTTCTCGCCGCTGGCGTACGTGGCGGG
CTCCTTATGCGGGTGCTTTCGGCGGGGGGCAATCGCGGCGCGCAGATGGCGGCCGCCCTCGAGATTGCCGCCGGGGCGCT
GGTGCTGGCGCTCTGTCTGCAGCTGTTGCTGCGCAGCCTCTGA

Upstream 100 bases:

>100_bases
CTGCTCTATTCGATGCCCACCGAGCAGGCCGAGGACGCGTTCCCGGAGGTTGGCTCCGCGTTTGCATCCACCGTCGCCGT
GGCGTGTGAGGGCTGAGAGG

Downstream 100 bases:

>100_bases
TTGCACTCTCGCGGTCGCACACGCAGACAGGCGCTGTGGGGTTTGGCTGTTTCAGAGTTTCTATTCTGCCCAATCCTTGT
GCAATTGTATCGGTACGCAA

Product: high-affinity nickel-transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MRHLPGIVLAITLVALAALAIWLWGLGGADHILRAASEAQRDAQNAMARGLRALKGGQPGAWWGLMGVCFAYGFFHAAGP
GHGKLVIGGYGLGSAVTLWRLSALAVASSLAQAATAVLLVLSGVWLFDWGRERLTATAEDLLAPVSYALMALLGLYLLLR
GLRRGWRLRAAEAGPHAHADHHHVPAGTGGAQDHAPVALQSVGTHHNHHHDHQHHDHDHHDHHDHGHNHHAHGPGEVCAS
CGHRHGPTLQEAASLRSWREAVAIILSIAARPCTGAVFLLLLTWRLDVLGAGVAGTFAMGLGTASVTLCVALLAAGVRGG
LLMRVLSAGGNRGAQMAAALEIAAGALVLALCLQLLLRSL

Sequences:

>Translated_360_residues
MRHLPGIVLAITLVALAALAIWLWGLGGADHILRAASEAQRDAQNAMARGLRALKGGQPGAWWGLMGVCFAYGFFHAAGP
GHGKLVIGGYGLGSAVTLWRLSALAVASSLAQAATAVLLVLSGVWLFDWGRERLTATAEDLLAPVSYALMALLGLYLLLR
GLRRGWRLRAAEAGPHAHADHHHVPAGTGGAQDHAPVALQSVGTHHNHHHDHQHHDHDHHDHHDHGHNHHAHGPGEVCAS
CGHRHGPTLQEAASLRSWREAVAIILSIAARPCTGAVFLLLLTWRLDVLGAGVAGTFAMGLGTASVTLCVALLAAGVRGG
LLMRVLSAGGNRGAQMAAALEIAAGALVLALCLQLLLRSL
>Mature_360_residues
MRHLPGIVLAITLVALAALAIWLWGLGGADHILRAASEAQRDAQNAMARGLRALKGGQPGAWWGLMGVCFAYGFFHAAGP
GHGKLVIGGYGLGSAVTLWRLSALAVASSLAQAATAVLLVLSGVWLFDWGRERLTATAEDLLAPVSYALMALLGLYLLLR
GLRRGWRLRAAEAGPHAHADHHHVPAGTGGAQDHAPVALQSVGTHHNHHHDHQHHDHDHHDHHDHGHNHHAHGPGEVCAS
CGHRHGPTLQEAASLRSWREAVAIILSIAARPCTGAVFLLLLTWRLDVLGAGVAGTFAMGLGTASVTLCVALLAAGVRGG
LLMRVLSAGGNRGAQMAAALEIAAGALVLALCLQLLLRSL

Specific function: Unknown

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37652; Mature: 37652

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHLPGIVLAITLVALAALAIWLWGLGGADHILRAASEAQRDAQNAMARGLRALKGGQPG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AWWGLMGVCFAYGFFHAAGPGHGKLVIGGYGLGSAVTLWRLSALAVASSLAQAATAVLLV
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGVWLFDWGRERLTATAEDLLAPVSYALMALLGLYLLLRGLRRGWRLRAAEAGPHAHAD
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCC
HHHVPAGTGGAQDHAPVALQSVGTHHNHHHDHQHHDHDHHDHHDHGHNHHAHGPGEVCAS
CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
CGHRHGPTLQEAASLRSWREAVAIILSIAARPCTGAVFLLLLTWRLDVLGAGVAGTFAMG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LGTASVTLCVALLAAGVRGGLLMRVLSAGGNRGAQMAAALEIAAGALVLALCLQLLLRSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRHLPGIVLAITLVALAALAIWLWGLGGADHILRAASEAQRDAQNAMARGLRALKGGQPG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AWWGLMGVCFAYGFFHAAGPGHGKLVIGGYGLGSAVTLWRLSALAVASSLAQAATAVLLV
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGVWLFDWGRERLTATAEDLLAPVSYALMALLGLYLLLRGLRRGWRLRAAEAGPHAHAD
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCC
HHHVPAGTGGAQDHAPVALQSVGTHHNHHHDHQHHDHDHHDHHDHGHNHHAHGPGEVCAS
CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
CGHRHGPTLQEAASLRSWREAVAIILSIAARPCTGAVFLLLLTWRLDVLGAGVAGTFAMG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LGTASVTLCVALLAAGVRGGLLMRVLSAGGNRGAQMAAALEIAAGALVLALCLQLLLRSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA