| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99081549
Identifier: 99081549
GI number: 99081549
Start: 1807406
End: 1807864
Strand: Direct
Name: 99081549
Synonym: TM1040_1708
Alternate gene names: NA
Gene position: 1807406-1807864 (Clockwise)
Preceding gene: 99081548
Following gene: 99081550
Centisome position: 56.46
GC content: 64.05
Gene sequence:
>459_bases ATGCTGAAGAAGCTGTTTCAGGCCTTTCGCCCGCCGCAAAGCCCGAACCTGCCCGACCCGGATGCGGAACTGGCGCTTGG TGCGCTTCTGGTGCGGATCGCACAGTCTGACCGGGCCTATCTTCTGGAAGAAATCAGCCTGATCGACCGCATTCTGGCGC GTCTGTACGGGCACAATGCGCTGGAGGCCGCCAAGGTGCGCGCCACCTGTGAGAAGCTGCATGCCGCAGCGCCTGAGACG GACACGTTTGGCCGCCTGATCCGCGAGACGACCGGGCTTGAAGAACGGCTGGCGGCGCTGGATGCGCTCTGGGAAGTGGT TCTGGCGGACAACCGCGAACACGAGGGCGAAATCCGGATCGTCGAAGACGCCTGCAAGGCCATGGGGCTGTCGGTGATCG ACAACAAACGGGCGCGTGATCGTGCCCGCGCCAAGCTGGCCACGCAACCAACGGAGTAG
Upstream 100 bases:
>100_bases GCCTACCAAGAGGCCAAGGCGCTCAGAGATCCGGTTTCGACCGGAGATATGGAAATAGTCGAAGGCTACGACGGCTGACG CCGCCGAAAAGGAGTTTTTG
Downstream 100 bases:
>100_bases GAAAGCGCATGATATTCAAGGACTTTTTGGATAAGCTATTGGCGCCTGCTCCGTCGATCTTACCAGATGAGGATGCCCGG CTCGCACTGACGGCACTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MLKKLFQAFRPPQSPNLPDPDAELALGALLVRIAQSDRAYLLEEISLIDRILARLYGHNALEAAKVRATCEKLHAAAPET DTFGRLIRETTGLEERLAALDALWEVVLADNREHEGEIRIVEDACKAMGLSVIDNKRARDRARAKLATQPTE
Sequences:
>Translated_152_residues MLKKLFQAFRPPQSPNLPDPDAELALGALLVRIAQSDRAYLLEEISLIDRILARLYGHNALEAAKVRATCEKLHAAAPET DTFGRLIRETTGLEERLAALDALWEVVLADNREHEGEIRIVEDACKAMGLSVIDNKRARDRARAKLATQPTE >Mature_152_residues MLKKLFQAFRPPQSPNLPDPDAELALGALLVRIAQSDRAYLLEEISLIDRILARLYGHNALEAAKVRATCEKLHAAAPET DTFGRLIRETTGLEERLAALDALWEVVLADNREHEGEIRIVEDACKAMGLSVIDNKRARDRARAKLATQPTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16923; Mature: 16923
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKLFQAFRPPQSPNLPDPDAELALGALLVRIAQSDRAYLLEEISLIDRILARLYGHNA CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCH LEAAKVRATCEKLHAAAPETDTFGRLIRETTGLEERLAALDALWEVVLADNREHEGEIRI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEH VEDACKAMGLSVIDNKRARDRARAKLATQPTE HHHHHHHHCCHHHHCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLKKLFQAFRPPQSPNLPDPDAELALGALLVRIAQSDRAYLLEEISLIDRILARLYGHNA CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCH LEAAKVRATCEKLHAAAPETDTFGRLIRETTGLEERLAALDALWEVVLADNREHEGEIRI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEH VEDACKAMGLSVIDNKRARDRARAKLATQPTE HHHHHHHHCCHHHHCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA