Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081548

Identifier: 99081548

GI number: 99081548

Start: 1807090

End: 1807383

Strand: Direct

Name: 99081548

Synonym: TM1040_1707

Alternate gene names: NA

Gene position: 1807090-1807383 (Clockwise)

Preceding gene: 99081547

Following gene: 99081549

Centisome position: 56.46

GC content: 57.48

Gene sequence:

>294_bases
ATGGCCAAAGGGTATTGGGTGGCGCATGTCGATATTGACGACATGGAGCGCTATAAGGCGTATATTGACGCCAACGCGGC
CCCCTTTCGTGAGTATGGCGCGCGATTTCTGGTTCGAGGCGGCGCCAAAGAGGTGCGCGAAGGACAGACGCGTGCGCGCA
CCGTTGTGATCGAATTCAAGGATTTTGCGACGGCCAAGGCCTGCTATGACAGCCTCGCCTACCAAGAGGCCAAGGCGCTC
AGAGATCCGGTTTCGACCGGAGATATGGAAATAGTCGAAGGCTACGACGGCTGA

Upstream 100 bases:

>100_bases
ATCGCCTATAGGTGGTGATTGCCAAAGCCCGGGATCTGGTACAGCTTGGGTGCAGAACACGAGAGGCCGGTCACCGGCCC
GGACTACATGGGGAACGAAA

Downstream 100 bases:

>100_bases
CGCCGCCGAAAAGGAGTTTTTGATGCTGAAGAAGCTGTTTCAGGCCTTTCGCCCGCCGCAAAGCCCGAACCTGCCCGACC
CGGATGCGGAACTGGCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MAKGYWVAHVDIDDMERYKAYIDANAAPFREYGARFLVRGGAKEVREGQTRARTVVIEFKDFATAKACYDSLAYQEAKAL
RDPVSTGDMEIVEGYDG

Sequences:

>Translated_97_residues
MAKGYWVAHVDIDDMERYKAYIDANAAPFREYGARFLVRGGAKEVREGQTRARTVVIEFKDFATAKACYDSLAYQEAKAL
RDPVSTGDMEIVEGYDG
>Mature_96_residues
AKGYWVAHVDIDDMERYKAYIDANAAPFREYGARFLVRGGAKEVREGQTRARTVVIEFKDFATAKACYDSLAYQEAKALR
DPVSTGDMEIVEGYDG

Specific function: Unknown

COG id: COG5470

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10907; Mature: 10776

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGYWVAHVDIDDMERYKAYIDANAAPFREYGARFLVRGGAKEVREGQTRARTVVIEFK
CCCCEEEEEECHHHHHHHHHHHCCCCCCHHHHCCCEEECCCHHHHHCCCCCCEEEEEEEC
DFATAKACYDSLAYQEAKALRDPVSTGDMEIVEGYDG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC
>Mature Secondary Structure 
AKGYWVAHVDIDDMERYKAYIDANAAPFREYGARFLVRGGAKEVREGQTRARTVVIEFK
CCCEEEEEECHHHHHHHHHHHCCCCCCHHHHCCCEEECCCHHHHHCCCCCCEEEEEEEC
DFATAKACYDSLAYQEAKALRDPVSTGDMEIVEGYDG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA