The gene/protein map for NC_012472 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081443

Identifier: 99081443

GI number: 99081443

Start: 1713369

End: 1714235

Strand: Reverse

Name: 99081443

Synonym: TM1040_1602

Alternate gene names: NA

Gene position: 1714235-1713369 (Counterclockwise)

Preceding gene: 99081444

Following gene: 99081442

Centisome position: 53.55

GC content: 46.02

Gene sequence:

>867_bases
GTGACCGAATTTTTTGCAAATGTTGGTGTTGTGCTGTCGGCAATTGGACAGGGTTTAAAGGAAGATCCAGCTAAGTTTCA
GCACCTAATTGGTGGGGGCTTAGCGTTTTTTGGTGTCTTGCTGACGGTGTGGACAACAGGCCGACGTCTCCGAGAGCAGC
TCGCTCACGCTACGCAGCTGGATAAAGCACGTCATGAAAGGGACTTAGAGGTCAAGCGTCGTTCCTTGAAGGGAGCACTT
TCTGCTGAACTTTCAGTTATCTCAGGCTTCCTAAGAGACGAAGATATCCAACTGCGTAAGTGGATCACCCCTGACTGGAA
GACCATTGAAGAATTGCGCGTCGAACCTGACGAGGCAATCGATCTCGAACTGCTAGTACCAGAAGTTAAGAAGACCGACA
CGCTCAATAGACCTGAAGCCCCTTACAGGTTCTCTATGCCTGAGAGGGACGAAATCTATAGCGCGCTCGTAGGTGAACTT
GCGGTTCTAAGTGTAGAAGAAATTCAGACAATCATCGTCGCATACGACAAGTTTCAGTCATTTAAAAGCTGGGTTAAAGA
ACATTGTGATGACCAGGTCGAGCAGACAAACGTCTATATTTTTTCGAAGGGAAAAGACCTGTGTTCTCTCCAAGCTCAAA
TTGAAGATGCCAAGACGGAACTAGACTGGTACTTGAGTACGCTGCTAGATGAGATTACTTTGAAGGAGCCGGCATCTAGC
AGCGCATCAAAATGGTGTAGTTTTGTATCCCCAAGCTACTTGGTATTACTTGGTGCGAGCTTTTTGTTTGGATTTTGGGT
CAATAGTTCAACTGTTGAGAATGAACCGACAAGCACTAATGAGACTAAGTCGATTAAATCGAAATAG

Upstream 100 bases:

>100_bases
TGTGTTCAATGGCGTCGACAGACTCGCTTGGCATGGGTTTGATTGGGAAGAGGGTGCTTGGTTCGTTGCTCACCCTCAGA
ATTCATTGGAGTGATTTTTC

Downstream 100 bases:

>100_bases
GAGGTTGAGAACATCAAGTGGATTTTTTTACGCGTATCTCTGATGTTGTTTCCTGCGTGCTGCGCCCAGTTTCAGATCAG
AGTGAAAATCACTTTTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTEFFANVGVVLSAIGQGLKEDPAKFQHLIGGGLAFFGVLLTVWTTGRRLREQLAHATQLDKARHERDLEVKRRSLKGAL
SAELSVISGFLRDEDIQLRKWITPDWKTIEELRVEPDEAIDLELLVPEVKKTDTLNRPEAPYRFSMPERDEIYSALVGEL
AVLSVEEIQTIIVAYDKFQSFKSWVKEHCDDQVEQTNVYIFSKGKDLCSLQAQIEDAKTELDWYLSTLLDEITLKEPASS
SASKWCSFVSPSYLVLLGASFLFGFWVNSSTVENEPTSTNETKSIKSK

Sequences:

>Translated_288_residues
MTEFFANVGVVLSAIGQGLKEDPAKFQHLIGGGLAFFGVLLTVWTTGRRLREQLAHATQLDKARHERDLEVKRRSLKGAL
SAELSVISGFLRDEDIQLRKWITPDWKTIEELRVEPDEAIDLELLVPEVKKTDTLNRPEAPYRFSMPERDEIYSALVGEL
AVLSVEEIQTIIVAYDKFQSFKSWVKEHCDDQVEQTNVYIFSKGKDLCSLQAQIEDAKTELDWYLSTLLDEITLKEPASS
SASKWCSFVSPSYLVLLGASFLFGFWVNSSTVENEPTSTNETKSIKSK
>Mature_287_residues
TEFFANVGVVLSAIGQGLKEDPAKFQHLIGGGLAFFGVLLTVWTTGRRLREQLAHATQLDKARHERDLEVKRRSLKGALS
AELSVISGFLRDEDIQLRKWITPDWKTIEELRVEPDEAIDLELLVPEVKKTDTLNRPEAPYRFSMPERDEIYSALVGELA
VLSVEEIQTIIVAYDKFQSFKSWVKEHCDDQVEQTNVYIFSKGKDLCSLQAQIEDAKTELDWYLSTLLDEITLKEPASSS
ASKWCSFVSPSYLVLLGASFLFGFWVNSSTVENEPTSTNETKSIKSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32572; Mature: 32441

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFFANVGVVLSAIGQGLKEDPAKFQHLIGGGLAFFGVLLTVWTTGRRLREQLAHATQL
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DKARHERDLEVKRRSLKGALSAELSVISGFLRDEDIQLRKWITPDWKTIEELRVEPDEAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHCCCCCCC
DLELLVPEVKKTDTLNRPEAPYRFSMPERDEIYSALVGELAVLSVEEIQTIIVAYDKFQS
CCEEECCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKSWVKEHCDDQVEQTNVYIFSKGKDLCSLQAQIEDAKTELDWYLSTLLDEITLKEPASS
HHHHHHHHHCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SASKWCSFVSPSYLVLLGASFLFGFWVNSSTVENEPTSTNETKSIKSK
CHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
TEFFANVGVVLSAIGQGLKEDPAKFQHLIGGGLAFFGVLLTVWTTGRRLREQLAHATQL
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DKARHERDLEVKRRSLKGALSAELSVISGFLRDEDIQLRKWITPDWKTIEELRVEPDEAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHCCCCCCC
DLELLVPEVKKTDTLNRPEAPYRFSMPERDEIYSALVGELAVLSVEEIQTIIVAYDKFQS
CCEEECCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKSWVKEHCDDQVEQTNVYIFSKGKDLCSLQAQIEDAKTELDWYLSTLLDEITLKEPASS
HHHHHHHHHCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SASKWCSFVSPSYLVLLGASFLFGFWVNSSTVENEPTSTNETKSIKSK
CHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA