Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081444

Identifier: 99081444

GI number: 99081444

Start: 1714470

End: 1714868

Strand: Reverse

Name: 99081444

Synonym: TM1040_1603

Alternate gene names: NA

Gene position: 1714868-1714470 (Counterclockwise)

Preceding gene: 99081445

Following gene: 99081443

Centisome position: 53.57

GC content: 58.65

Gene sequence:

>399_bases
ATGACCGGCTTGATCGCATTCCTCATGCGCATGGGGTTCGGCGGTATGGTGGACAAAGCCATCAGCCATTTGGAGCGCCG
CGCTGAGCTTCAAAACGACCGCGAGAAGCTCAGGAGCCAAACGACTGTAGAGCTGGCCCGTGAGGCCGTGAAAGAAGCCC
AGATCATGGCCGACTACAATCGCGCCAAGCTCGCTTTTCCGTGGTTTTGGCTGTTCGCTGCGCTCTTCCTCGTACCCTTG
GCCGCATGGTGGAGCGCAGTCATTCTCGACAGCATCTTCGGATTCACTTGGTCTGTCGCAGATCTGCCAACCCCGCAAAT
GCAGGAGTGGGCCGGGGATATGATCCGGTGGCTATTCTATGTCGGCACGGGCGTCGGAGCGCTCAAGTCGCTTCGATGA

Upstream 100 bases:

>100_bases
CACAGCTTCAAGGCCCTGTTGCCTACGCCTTGGCCGCTGTGCTTCTGATTGCTGCTGTGACCGCCGCTCTGTACTTCCTG
CGCTCGCAGGAGGCTGCGGC

Downstream 100 bases:

>100_bases
AGCTGGCATAACCTCAAAGACGAAAGCCCCGCCATCGAGCGGGGCTTTTTCGTTTCTGGGGCGGCCTAACTTGCGATGTC
TCTATTTTGGTGGCTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYNRAKLAFPWFWLFAALFLVPL
AAWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFYVGTGVGALKSLR

Sequences:

>Translated_132_residues
MTGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYNRAKLAFPWFWLFAALFLVPL
AAWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFYVGTGVGALKSLR
>Mature_131_residues
TGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYNRAKLAFPWFWLFAALFLVPLA
AWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFYVGTGVGALKSLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15060; Mature: 14929

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYN
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RAKLAFPWFWLFAALFLVPLAAWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VGTGVGALKSLR
HHHHHHHHHCCC
>Mature Secondary Structure 
TGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQIMADYN
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RAKLAFPWFWLFAALFLVPLAAWWSAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VGTGVGALKSLR
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA