Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081366

Identifier: 99081366

GI number: 99081366

Start: 1628514

End: 1629239

Strand: Reverse

Name: 99081366

Synonym: TM1040_1525

Alternate gene names: NA

Gene position: 1629239-1628514 (Counterclockwise)

Preceding gene: 99081367

Following gene: 99081365

Centisome position: 50.9

GC content: 64.74

Gene sequence:

>726_bases
ATGAAAAGCGAAGCCTTTCATTATGGCGATGGCATAGATCAGTTCGTCGGCCACTTGGTATGCGACGACAGTCGAGAGGA
GCCCGCGCCCTGCGTCCTGATCGCGCCCGCCTTTGGCGGCTTGAGCGATTTTGAACGCGCCCGTGCCGAAGACCTCGCCA
AGCTCGGCTATGTCGCTCTCGCGGTTGATTACTACGGAGACGGCAAGCGCGCGGCCTCGCCAGAGGAGGCGCAGCACCTC
ATGGCAGGTTTGCAGGCGGATCGCACCGTGCTCGCGCGGCGTATGGGGGCAGCGCTGGAGGCCGCGCGTGCCTTGCCGCA
GGTGGATGCGGGGCGCATCGGCGCAATGGGCTACTGCTTGGGCGGCAAGGCCGTGCTGGATCTGGCGCGCACAGGGGCCG
ATCTGCGTGCGTGTGTGCCGCTGCATGGCGTCTATGACCGCCCCAATTTTGAGACCCAGACGATGCGCGCGGCGGTTCTG
GTGCTGCACGGTTGGGACGACCCGCTTGCCCCGCCTTCTGCGCTCGAGGCGCTTGCGGCTGAACTGAACGAACACTGCGC
GGATTGGCAGGTGCTCGGATTTGGACACACCGGGCATGCGTTCACCAACCCCAACGCCAAGGACAGCGCTGGTGGCATGA
TCTACAGCGCCACCGCAAGTTCACGGGCCTGGACTGCGCTGACGGGATTTCTGGCTGAGACGTTTGAAGGCGCCGCAAGT
GCATAG

Upstream 100 bases:

>100_bases
GTCCAAGGCTCCGATGAATACGAATAGCGAAAGGCCAGTGTCCCCGTGACACTGGCCTTTTTCTTTCTCAACTGCTGGGT
GTGTTAGGAGGGAACAGCAC

Downstream 100 bases:

>100_bases
CAGAAATGCATAATTTGCAGTGCCGATGCGCGCCAATCCACCATAGACTTTCCATGTGACAAACTGTTCAAGCGAAGTGG
AAGGACGCCTCATGACGATA

Product: dienelactone hydrolase

Products: NA

Alternate protein names: Dienelactone Hydrolase Family Protein; Carboxymethylenebutenolidase; Dienelactone Hydrolase Family; Hydrolase; Dienelactone Hydrolases; Dienelactone Hydrolase Protein; Dienelactone Hydrolase-Related; Transposase Remnant

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKSEAFHYGDGIDQFVGHLVCDDSREEPAPCVLIAPAFGGLSDFERARAEDLAKLGYVALAVDYYGDGKRAASPEEAQHL
MAGLQADRTVLARRMGAALEAARALPQVDAGRIGAMGYCLGGKAVLDLARTGADLRACVPLHGVYDRPNFETQTMRAAVL
VLHGWDDPLAPPSALEALAAELNEHCADWQVLGFGHTGHAFTNPNAKDSAGGMIYSATASSRAWTALTGFLAETFEGAAS
A

Sequences:

>Translated_241_residues
MKSEAFHYGDGIDQFVGHLVCDDSREEPAPCVLIAPAFGGLSDFERARAEDLAKLGYVALAVDYYGDGKRAASPEEAQHL
MAGLQADRTVLARRMGAALEAARALPQVDAGRIGAMGYCLGGKAVLDLARTGADLRACVPLHGVYDRPNFETQTMRAAVL
VLHGWDDPLAPPSALEALAAELNEHCADWQVLGFGHTGHAFTNPNAKDSAGGMIYSATASSRAWTALTGFLAETFEGAAS
A
>Mature_241_residues
MKSEAFHYGDGIDQFVGHLVCDDSREEPAPCVLIAPAFGGLSDFERARAEDLAKLGYVALAVDYYGDGKRAASPEEAQHL
MAGLQADRTVLARRMGAALEAARALPQVDAGRIGAMGYCLGGKAVLDLARTGADLRACVPLHGVYDRPNFETQTMRAAVL
VLHGWDDPLAPPSALEALAAELNEHCADWQVLGFGHTGHAFTNPNAKDSAGGMIYSATASSRAWTALTGFLAETFEGAAS
A

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17536419, Length=207, Percent_Identity=37.6811594202899, Blast_Score=125, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17532655, Length=228, Percent_Identity=32.8947368421053, Blast_Score=118, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17532653, Length=222, Percent_Identity=36.4864864864865, Blast_Score=112, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17536415, Length=206, Percent_Identity=31.5533980582524, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193204305, Length=212, Percent_Identity=30.188679245283, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17534829, Length=159, Percent_Identity=32.0754716981132, Blast_Score=74, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25406; Mature: 25406

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSEAFHYGDGIDQFVGHLVCDDSREEPAPCVLIAPAFGGLSDFERARAEDLAKLGYVAL
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHEEE
AVDYYGDGKRAASPEEAQHLMAGLQADRTVLARRMGAALEAARALPQVDAGRIGAMGYCL
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC
GGKAVLDLARTGADLRACVPLHGVYDRPNFETQTMRAAVLVLHGWDDPLAPPSALEALAA
CCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHEEEEEEEECCCCCCCCHHHHHHHHH
ELNEHCADWQVLGFGHTGHAFTNPNAKDSAGGMIYSATASSRAWTALTGFLAETFEGAAS
HHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC
A
C
>Mature Secondary Structure
MKSEAFHYGDGIDQFVGHLVCDDSREEPAPCVLIAPAFGGLSDFERARAEDLAKLGYVAL
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHEEE
AVDYYGDGKRAASPEEAQHLMAGLQADRTVLARRMGAALEAARALPQVDAGRIGAMGYCL
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC
GGKAVLDLARTGADLRACVPLHGVYDRPNFETQTMRAAVLVLHGWDDPLAPPSALEALAA
CCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHEEEEEEEECCCCCCCCHHHHHHHHH
ELNEHCADWQVLGFGHTGHAFTNPNAKDSAGGMIYSATASSRAWTALTGFLAETFEGAAS
HHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA