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The map label for this gene is ycdK [C]

Identifier: 99081365

GI number: 99081365

Start: 1628057

End: 1628422

Strand: Reverse

Name: ycdK [C]

Synonym: TM1040_1524

Alternate gene names: 99081365

Gene position: 1628422-1628057 (Counterclockwise)

Preceding gene: 99081366

Following gene: 99081364

Centisome position: 50.87

GC content: 59.56

Gene sequence:

>366_bases
ATGACGATAAAACGCATTTCTTCGGGCGGAGAATTTGAGGCCAAGGTCGGCTATTGCCGAGCGGTTGTGGCGGGCGGCTT
TGTGCATGTCGCCGGCACCGTGGGGCAGGGCGAAGATGTGGTGGCACAGTGCCGCTCGGCTCTGGCGACCATCGAGGCTG
CGCTTGCCAAGGCCGGTGTGAGTTTTGCCGAGGTGGTACGCGTGAATTATTACCTTCCCGATGCGTCCGAGTTTGAACCC
TGCTGGCCGATCCTTGCTGAAACCTTTGGAGAAAACCCGCCTGCCGCGACCATGATTGAATGCAACCTGATCGCGCCGGA
ATACCGGATCGAGATCGAAGTGACAGCACTGGCGACCCCGGCATAG

Upstream 100 bases:

>100_bases
AGTGCATAGCAGAAATGCATAATTTGCAGTGCCGATGCGCGCCAATCCACCATAGACTTTCCATGTGACAAACTGTTCAA
GCGAAGTGGAAGGACGCCTC

Downstream 100 bases:

>100_bases
GCGCGCGACAGATGGAGCAGACTTCGCAAACGGTGACCATCCGCCCCGCCATTCCCGTGGTTCGAATTTTTGATCTGCAG
AAGGCGCGCGACTACTATAT

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Endoribonuclease L-PSP Family Protein; Acetyltransferase; Pyrimidine Utilization Protein C; Endoribonuclease L-PSP Superfamily

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MTIKRISSGGEFEAKVGYCRAVVAGGFVHVAGTVGQGEDVVAQCRSALATIEAALAKAGVSFAEVVRVNYYLPDASEFEP
CWPILAETFGENPPAATMIECNLIAPEYRIEIEVTALATPA

Sequences:

>Translated_121_residues
MTIKRISSGGEFEAKVGYCRAVVAGGFVHVAGTVGQGEDVVAQCRSALATIEAALAKAGVSFAEVVRVNYYLPDASEFEP
CWPILAETFGENPPAATMIECNLIAPEYRIEIEVTALATPA
>Mature_120_residues
TIKRISSGGEFEAKVGYCRAVVAGGFVHVAGTVGQGEDVVAQCRSALATIEAALAKAGVSFAEVVRVNYYLPDASEFEPC
WPILAETFGENPPAATMIECNLIAPEYRIEIEVTALATPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12766; Mature: 12634

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKRISSGGEFEAKVGYCRAVVAGGFVHVAGTVGQGEDVVAQCRSALATIEAALAKAGV
CCCCCCCCCCCEEHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
SFAEVVRVNYYLPDASEFEPCWPILAETFGENPPAATMIECNLIAPEYRIEIEVTALATP
CHHHEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEEEEEECC
A
C
>Mature Secondary Structure 
TIKRISSGGEFEAKVGYCRAVVAGGFVHVAGTVGQGEDVVAQCRSALATIEAALAKAGV
CCCCCCCCCCEEHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
SFAEVVRVNYYLPDASEFEPCWPILAETFGENPPAATMIECNLIAPEYRIEIEVTALATP
CHHHEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEEEEEECC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA