| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is envZ [H]
Identifier: 99081320
GI number: 99081320
Start: 1579845
End: 1581173
Strand: Reverse
Name: envZ [H]
Synonym: TM1040_1479
Alternate gene names: 99081320
Gene position: 1581173-1579845 (Counterclockwise)
Preceding gene: 99081322
Following gene: 99081318
Centisome position: 49.4
GC content: 60.8
Gene sequence:
>1329_bases ATGAAACTCTCTGATCTCAAACACTATGTACCGCGCCTTCCCAGCGGGATCTACGGCCGGGCGGCGCTTATTCTGTTGAT GCCGGTGGTGGCTTTACAACTGGTGGTGGCCTTTGTGTTCATTCGCCGAGACCTTGAGGACATCACGCAGCAAATGGCCT ACACTGTTGCGCGCGAGCTCAATGTCATCAGCGATCAGATCGCCACCGCAGAAAGTCCCGAAGCGGCCCTGAGTGACCTT CAGCCGATGTTGCAGCGGCTCAATTTTCAGATGCGTTTTATCTCTGCCGAGGAGCCCACGCCGCAGAACTCCATTCCGTT TGAGGATCTGTCTGGCCGTTTTGTGCGCGACTCCATGGTGGGATACCTGCCGCAGTTCCAGTCCATCCGGTTCACGCGCT CCCACGCCAGCTATATCATGATCGATACAAAATTTGGTCTCGCGGAGGTGAAGTTCAGCCGCCGTCGCGTGACCGTCGCC GCACCACACCAGTTGATCGTGATCACGGTGCTGTTTGGCTTTATGCTTGTGGTGATCGCCATGGCCTATATGCGCAACCA ACTGCGCCCCATCAAACGGCTCGCGGATGCGGCCGAGGCCTTTGGGCGCGGGCGGGTGATCCCCTATCACCCGCGTGGGG CAACCGAGGTACGCGCGGCGGGGGCGGCTTTCAATGACATGCGCGCGCGCATTGATCGGCAGATCGAACAGCGCACCTTG ATGTTGTCAGGGGTCAGCCACGACCTGCGCACGCCTTTGACGCGCTTGAAACTGAGCCTCTCGATGCTGGACGACGAGGA GGCCGAGCCGATGTTGCAGGACGTGAAGGAGATGGAAGCTATGGTCGATGCCTTTCTCGACTTCTCGCGCGGTGTGACTA CAAGCGCGATGGAGGAAACCGACCCCTGCAAGCTCGTGGAGGAAGCGGTCGAGAACTGGACCCGACAGGGCAAGACCGTG CATCTGGTAGAGACGGTCGGCAATCGCCGGGTGCCGCTGCGGGCCGCTGCGGTGCGTCGTGCCCTTGACAATCTGATTTC AAACGCGGTGCGCTATGGCACGCGCGCCCGAGTGTCGGTTGCAGTGATGCAGAAATCGCTGCGCATTCGGGTGGAGGATG ACGGCCCTGGTATCCCCGAAGCATTGCGCGGGGATGCGATGCGCCCCTTCACGCGGCTTGATCCGGCGCGGAATCAGGAT CTGGGCACCGGTGTCGGGCTGGGGTTGGCCATTGTGGCTGATATTGCCCGCGCCCATGGTGGAACACTGCGCCTTGGCAC CAGCGAAGAGCTGGGCGGGCTTCAGGCCGATATTGTGATCGCGCTCTGA
Upstream 100 bases:
>100_bases GCGAAGCCGGGTTTGGGGTTGAACCCATCGGTGGGTTGCGATCTGCTCATGATGTGCCTCATCCTTGGGGACGCAGAATT GTCCCGCTCTAGGCTTAGTC
Downstream 100 bases:
>100_bases GCGGCCTCAACCGGCGCTGTGACAAGATTTTTGGTACACTCAAGCAAGTGCGATACGGGCGACAGAGCAGCTGCGATCGG GGCAATTGCGTCCTGGATGG
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MKLSDLKHYVPRLPSGIYGRAALILLMPVVALQLVVAFVFIRRDLEDITQQMAYTVARELNVISDQIATAESPEAALSDL QPMLQRLNFQMRFISAEEPTPQNSIPFEDLSGRFVRDSMVGYLPQFQSIRFTRSHASYIMIDTKFGLAEVKFSRRRVTVA APHQLIVITVLFGFMLVVIAMAYMRNQLRPIKRLADAAEAFGRGRVIPYHPRGATEVRAAGAAFNDMRARIDRQIEQRTL MLSGVSHDLRTPLTRLKLSLSMLDDEEAEPMLQDVKEMEAMVDAFLDFSRGVTTSAMEETDPCKLVEEAVENWTRQGKTV HLVETVGNRRVPLRAAAVRRALDNLISNAVRYGTRARVSVAVMQKSLRIRVEDDGPGIPEALRGDAMRPFTRLDPARNQD LGTGVGLGLAIVADIARAHGGTLRLGTSEELGGLQADIVIAL
Sequences:
>Translated_442_residues MKLSDLKHYVPRLPSGIYGRAALILLMPVVALQLVVAFVFIRRDLEDITQQMAYTVARELNVISDQIATAESPEAALSDL QPMLQRLNFQMRFISAEEPTPQNSIPFEDLSGRFVRDSMVGYLPQFQSIRFTRSHASYIMIDTKFGLAEVKFSRRRVTVA APHQLIVITVLFGFMLVVIAMAYMRNQLRPIKRLADAAEAFGRGRVIPYHPRGATEVRAAGAAFNDMRARIDRQIEQRTL MLSGVSHDLRTPLTRLKLSLSMLDDEEAEPMLQDVKEMEAMVDAFLDFSRGVTTSAMEETDPCKLVEEAVENWTRQGKTV HLVETVGNRRVPLRAAAVRRALDNLISNAVRYGTRARVSVAVMQKSLRIRVEDDGPGIPEALRGDAMRPFTRLDPARNQD LGTGVGLGLAIVADIARAHGGTLRLGTSEELGGLQADIVIAL >Mature_442_residues MKLSDLKHYVPRLPSGIYGRAALILLMPVVALQLVVAFVFIRRDLEDITQQMAYTVARELNVISDQIATAESPEAALSDL QPMLQRLNFQMRFISAEEPTPQNSIPFEDLSGRFVRDSMVGYLPQFQSIRFTRSHASYIMIDTKFGLAEVKFSRRRVTVA APHQLIVITVLFGFMLVVIAMAYMRNQLRPIKRLADAAEAFGRGRVIPYHPRGATEVRAAGAAFNDMRARIDRQIEQRTL MLSGVSHDLRTPLTRLKLSLSMLDDEEAEPMLQDVKEMEAMVDAFLDFSRGVTTSAMEETDPCKLVEEAVENWTRQGKTV HLVETVGNRRVPLRAAAVRRALDNLISNAVRYGTRARVSVAVMQKSLRIRVEDDGPGIPEALRGDAMRPFTRLDPARNQD LGTGVGLGLAIVADIARAHGGTLRLGTSEELGGLQADIVIAL
Specific function: Member of the two-component regulatory system envZ/ompR involved in the regulation of osmoregulation (genes ompF and ompC). EnvZ functions as a membrane-associated protein kinase that phosphorylates ompR in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789808, Length=275, Percent_Identity=36.3636363636364, Blast_Score=154, Evalue=9e-39, Organism=Escherichia coli, GI1787894, Length=285, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI1790346, Length=269, Percent_Identity=33.457249070632, Blast_Score=123, Evalue=3e-29, Organism=Escherichia coli, GI1790551, Length=286, Percent_Identity=27.6223776223776, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87082128, Length=285, Percent_Identity=27.719298245614, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1790861, Length=311, Percent_Identity=27.6527331189711, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786783, Length=226, Percent_Identity=30.9734513274336, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1786600, Length=224, Percent_Identity=30.8035714285714, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1789403, Length=352, Percent_Identity=25.8522727272727, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788393, Length=281, Percent_Identity=24.1992882562278, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788279, Length=283, Percent_Identity=24.7349823321555, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1786912, Length=224, Percent_Identity=29.0178571428571, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1788549, Length=237, Percent_Identity=25.3164556962025, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49151; Mature: 49151
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSDLKHYVPRLPSGIYGRAALILLMPVVALQLVVAFVFIRRDLEDITQQMAYTVAREL CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVISDQIATAESPEAALSDLQPMLQRLNFQMRFISAEEPTPQNSIPFEDLSGRFVRDSMV HHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCCHHHHHHH GYLPQFQSIRFTRSHASYIMIDTKFGLAEVKFSRRRVTVAAPHQLIVITVLFGFMLVVIA HHCCCHHHEEEEECCCCEEEEECCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHH MAYMRNQLRPIKRLADAAEAFGRGRVIPYHPRGATEVRAAGAAFNDMRARIDRQIEQRTL HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MLSGVSHDLRTPLTRLKLSLSMLDDEEAEPMLQDVKEMEAMVDAFLDFSRGVTTSAMEET HHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC DPCKLVEEAVENWTRQGKTVHLVETVGNRRVPLRAAAVRRALDNLISNAVRYGTRARVSV CHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH AVMQKSLRIRVEDDGPGIPEALRGDAMRPFTRLDPARNQDLGTGVGLGLAIVADIARAHG HHHHHHHEEEECCCCCCCCHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC GTLRLGTSEELGGLQADIVIAL CEEEECCCHHHCCCEEEEEEEC >Mature Secondary Structure MKLSDLKHYVPRLPSGIYGRAALILLMPVVALQLVVAFVFIRRDLEDITQQMAYTVAREL CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVISDQIATAESPEAALSDLQPMLQRLNFQMRFISAEEPTPQNSIPFEDLSGRFVRDSMV HHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCCHHHHHHH GYLPQFQSIRFTRSHASYIMIDTKFGLAEVKFSRRRVTVAAPHQLIVITVLFGFMLVVIA HHCCCHHHEEEEECCCCEEEEECCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHH MAYMRNQLRPIKRLADAAEAFGRGRVIPYHPRGATEVRAAGAAFNDMRARIDRQIEQRTL HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MLSGVSHDLRTPLTRLKLSLSMLDDEEAEPMLQDVKEMEAMVDAFLDFSRGVTTSAMEET HHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC DPCKLVEEAVENWTRQGKTVHLVETVGNRRVPLRAAAVRRALDNLISNAVRYGTRARVSV CHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH AVMQKSLRIRVEDDGPGIPEALRGDAMRPFTRLDPARNQDLGTGVGLGLAIVADIARAHG HHHHHHHEEEECCCCCCCCHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC GTLRLGTSEELGGLQADIVIAL CEEEECCCHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6292200; 2997120; 9278503; 8132603; 2277041; 2824492; 1323560; 9817206; 10426948 [H]