| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081214
Identifier: 99081214
GI number: 99081214
Start: 1466164
End: 1466496
Strand: Direct
Name: 99081214
Synonym: TM1040_1373
Alternate gene names: NA
Gene position: 1466164-1466496 (Clockwise)
Preceding gene: 99081210
Following gene: 99081216
Centisome position: 45.8
GC content: 63.06
Gene sequence:
>333_bases ATGCAGGATCTTAGAACACGGCTTACCACGCTTCATCGCCCACGTCTGCTGGCGCGGACCGCGCGTATTGGGGCGGATGA CTATATCCGTCAGCGCGATCTTAAACGCCTGCTGCCGTCGACGCCATCGCAGGGCACCGGCGCAATCCTGATGCAGCTTT TGGACCTCGAAGCCACGCAGGAGCGCGCGCGCTTAGGGCAGAATCCCGGCTATTCCTTTGCCCGTCATGTCGCAGTCCTC ACGGCGTTGAGCGCCGAAAGCCGTCTCTATCTGGCGTCGCGCTCGCAGCCCCGACGCGCAACAAAAAACGGCGCCCCGCA GGACGCCGTTTGA
Upstream 100 bases:
>100_bases CTATTGGAAATGGACCGTTCGCTCACATGCTGATTTGCGCAACACCCGTTTAGGTTGTTTACTATTGCCCCTGTTGTTCA CTCAGGCTCGGGGAATTGTC
Downstream 100 bases:
>100_bases ACTCAATACCACGGATCGCTTACATAAAGGCGTCGGGCATCGAGGCTTTCTTTTCTGCGATGTAAGCCATCAGCGCCTCA CGGATCGCGGGATCCAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MQDLRTRLTTLHRPRLLARTARIGADDYIRQRDLKRLLPSTPSQGTGAILMQLLDLEATQERARLGQNPGYSFARHVAVL TALSAESRLYLASRSQPRRATKNGAPQDAV
Sequences:
>Translated_110_residues MQDLRTRLTTLHRPRLLARTARIGADDYIRQRDLKRLLPSTPSQGTGAILMQLLDLEATQERARLGQNPGYSFARHVAVL TALSAESRLYLASRSQPRRATKNGAPQDAV >Mature_110_residues MQDLRTRLTTLHRPRLLARTARIGADDYIRQRDLKRLLPSTPSQGTGAILMQLLDLEATQERARLGQNPGYSFARHVAVL TALSAESRLYLASRSQPRRATKNGAPQDAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12278; Mature: 12278
Theoretical pI: Translated: 11.90; Mature: 11.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDLRTRLTTLHRPRLLARTARIGADDYIRQRDLKRLLPSTPSQGTGAILMQLLDLEATQ CCHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH ERARLGQNPGYSFARHVAVLTALSAESRLYLASRSQPRRATKNGAPQDAV HHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHCCCCCCCCC >Mature Secondary Structure MQDLRTRLTTLHRPRLLARTARIGADDYIRQRDLKRLLPSTPSQGTGAILMQLLDLEATQ CCHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH ERARLGQNPGYSFARHVAVLTALSAESRLYLASRSQPRRATKNGAPQDAV HHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA