The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081214

Identifier: 99081214

GI number: 99081214

Start: 1466164

End: 1466496

Strand: Direct

Name: 99081214

Synonym: TM1040_1373

Alternate gene names: NA

Gene position: 1466164-1466496 (Clockwise)

Preceding gene: 99081210

Following gene: 99081216

Centisome position: 45.8

GC content: 63.06

Gene sequence:

>333_bases
ATGCAGGATCTTAGAACACGGCTTACCACGCTTCATCGCCCACGTCTGCTGGCGCGGACCGCGCGTATTGGGGCGGATGA
CTATATCCGTCAGCGCGATCTTAAACGCCTGCTGCCGTCGACGCCATCGCAGGGCACCGGCGCAATCCTGATGCAGCTTT
TGGACCTCGAAGCCACGCAGGAGCGCGCGCGCTTAGGGCAGAATCCCGGCTATTCCTTTGCCCGTCATGTCGCAGTCCTC
ACGGCGTTGAGCGCCGAAAGCCGTCTCTATCTGGCGTCGCGCTCGCAGCCCCGACGCGCAACAAAAAACGGCGCCCCGCA
GGACGCCGTTTGA

Upstream 100 bases:

>100_bases
CTATTGGAAATGGACCGTTCGCTCACATGCTGATTTGCGCAACACCCGTTTAGGTTGTTTACTATTGCCCCTGTTGTTCA
CTCAGGCTCGGGGAATTGTC

Downstream 100 bases:

>100_bases
ACTCAATACCACGGATCGCTTACATAAAGGCGTCGGGCATCGAGGCTTTCTTTTCTGCGATGTAAGCCATCAGCGCCTCA
CGGATCGCGGGATCCAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MQDLRTRLTTLHRPRLLARTARIGADDYIRQRDLKRLLPSTPSQGTGAILMQLLDLEATQERARLGQNPGYSFARHVAVL
TALSAESRLYLASRSQPRRATKNGAPQDAV

Sequences:

>Translated_110_residues
MQDLRTRLTTLHRPRLLARTARIGADDYIRQRDLKRLLPSTPSQGTGAILMQLLDLEATQERARLGQNPGYSFARHVAVL
TALSAESRLYLASRSQPRRATKNGAPQDAV
>Mature_110_residues
MQDLRTRLTTLHRPRLLARTARIGADDYIRQRDLKRLLPSTPSQGTGAILMQLLDLEATQERARLGQNPGYSFARHVAVL
TALSAESRLYLASRSQPRRATKNGAPQDAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12278; Mature: 12278

Theoretical pI: Translated: 11.90; Mature: 11.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDLRTRLTTLHRPRLLARTARIGADDYIRQRDLKRLLPSTPSQGTGAILMQLLDLEATQ
CCHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ERARLGQNPGYSFARHVAVLTALSAESRLYLASRSQPRRATKNGAPQDAV
HHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHCCCCCCCCC
>Mature Secondary Structure
MQDLRTRLTTLHRPRLLARTARIGADDYIRQRDLKRLLPSTPSQGTGAILMQLLDLEATQ
CCHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ERARLGQNPGYSFARHVAVLTALSAESRLYLASRSQPRRATKNGAPQDAV
HHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA