Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081210

Identifier: 99081210

GI number: 99081210

Start: 1462243

End: 1462569

Strand: Direct

Name: 99081210

Synonym: TM1040_1369

Alternate gene names: NA

Gene position: 1462243-1462569 (Clockwise)

Preceding gene: 99081209

Following gene: 99081214

Centisome position: 45.68

GC content: 60.86

Gene sequence:

>327_bases
ATGTCATATTCAAAGCTCATCCCCAGCCTTGCGATTGCAGGGCTGACCCTCGCACCGCTCGCCGCGCTGGCCGGTCCACC
CAAATGGGCACCAGGTCATAAAAACAGCGCCGCGCATTACGCGCCGGGACAAGTCAAGAAGCTTCACGCGCACGACCAGT
ATCTGAGCGGGGCTTGGGACTATGTCACTGACTATCAGCGCTGGGGACTGCAGCCCCCTGCTCCCGGCCATCACTATGTG
CGCAAGGATGGGGAAATCCTTGAGGTGGTCAAAGACACGCTCGCCATCGTGGGCGCGGTCGCCGTTGTCGATGCCCTGAT
CGACTGA

Upstream 100 bases:

>100_bases
TTTGCCTTGATGCAACCGGCGGCATCTGGCGCATGAGATTTGGCTCCGAACGGCCTGTGCGACATATACTGACGCAACCT
ACCGTTCAAAGGAGCGTCGC

Downstream 100 bases:

>100_bases
TCACACGACCGCATTCTGGCAGAGCGCTGAGCCTACCCCAACAGCTGACGGATCGCGCGAATAAAAATTCCGGACCCGAT
TGGGATGAGAGCATCCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSYSKLIPSLAIAGLTLAPLAALAGPPKWAPGHKNSAAHYAPGQVKKLHAHDQYLSGAWDYVTDYQRWGLQPPAPGHHYV
RKDGEILEVVKDTLAIVGAVAVVDALID

Sequences:

>Translated_108_residues
MSYSKLIPSLAIAGLTLAPLAALAGPPKWAPGHKNSAAHYAPGQVKKLHAHDQYLSGAWDYVTDYQRWGLQPPAPGHHYV
RKDGEILEVVKDTLAIVGAVAVVDALID
>Mature_107_residues
SYSKLIPSLAIAGLTLAPLAALAGPPKWAPGHKNSAAHYAPGQVKKLHAHDQYLSGAWDYVTDYQRWGLQPPAPGHHYVR
KDGEILEVVKDTLAIVGAVAVVDALID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11560; Mature: 11429

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSKLIPSLAIAGLTLAPLAALAGPPKWAPGHKNSAAHYAPGQVKKLHAHDQYLSGAWD
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH
YVTDYQRWGLQPPAPGHHYVRKDGEILEVVKDTLAIVGAVAVVDALID
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYSKLIPSLAIAGLTLAPLAALAGPPKWAPGHKNSAAHYAPGQVKKLHAHDQYLSGAWD
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH
YVTDYQRWGLQPPAPGHHYVRKDGEILEVVKDTLAIVGAVAVVDALID
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA