| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081126
Identifier: 99081126
GI number: 99081126
Start: 1382990
End: 1383349
Strand: Reverse
Name: 99081126
Synonym: TM1040_1285
Alternate gene names: NA
Gene position: 1383349-1382990 (Counterclockwise)
Preceding gene: 99081127
Following gene: 99081125
Centisome position: 43.22
GC content: 54.17
Gene sequence:
>360_bases ATGGCGCTTGATACGTCATGGTGCATCAAGGGTGGTTCGCGTGGCTATGTAACCACGCGAACCGTAACCTGGCACCTGAT GTGGAAAACATCACCATTTGTTCTGACAATTCCGCCGGGCCGTGAATTTGAAAGCTCTGTACCTCGCGTTTTGCAATGGA TCTGGTCGCCAGATGATCCCTATTACCTTAAAGCGGCATTGATACATGACACGCTTCTCGAGAACGGATCTCGCGCTTTC GAGGCCGACGCACAATGGCGAGCAGCTGCTTTGAGCGATCATGCGCCCCCACTTCGCACGACCATCGCTTTTGTCGCGAT GTGGGCCCGCCGCTTAGGTCAATCTGCATTGGGACTGTGA
Upstream 100 bases:
>100_bases GGGTAATCCGCAAATTCAGGCGGGACTAGATCTGCTGGTTGCAGCTGGGCTTTTGACGCCAGAACGAAAGGCGGAAATCT CGAGCGGTGTCGAGGCATAA
Downstream 100 bases:
>100_bases ATCTCGGCATTGGGAATCTGACCCTCTGGCTATACCGAAGGAAAACCGCCAGAGGCGCTTATCGCTCGCGCTCGCGATGA TTGCAGCAACATGCAATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MALDTSWCIKGGSRGYVTTRTVTWHLMWKTSPFVLTIPPGREFESSVPRVLQWIWSPDDPYYLKAALIHDTLLENGSRAF EADAQWRAAALSDHAPPLRTTIAFVAMWARRLGQSALGL
Sequences:
>Translated_119_residues MALDTSWCIKGGSRGYVTTRTVTWHLMWKTSPFVLTIPPGREFESSVPRVLQWIWSPDDPYYLKAALIHDTLLENGSRAF EADAQWRAAALSDHAPPLRTTIAFVAMWARRLGQSALGL >Mature_118_residues ALDTSWCIKGGSRGYVTTRTVTWHLMWKTSPFVLTIPPGREFESSVPRVLQWIWSPDDPYYLKAALIHDTLLENGSRAFE ADAQWRAAALSDHAPPLRTTIAFVAMWARRLGQSALGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13401; Mature: 13270
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDTSWCIKGGSRGYVTTRTVTWHLMWKTSPFVLTIPPGREFESSVPRVLQWIWSPDDP CCCCCCCEECCCCCCEEEEEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC YYLKAALIHDTLLENGSRAFEADAQWRAAALSDHAPPLRTTIAFVAMWARRLGQSALGL HHHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure ALDTSWCIKGGSRGYVTTRTVTWHLMWKTSPFVLTIPPGREFESSVPRVLQWIWSPDDP CCCCCCEECCCCCCEEEEEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC YYLKAALIHDTLLENGSRAFEADAQWRAAALSDHAPPLRTTIAFVAMWARRLGQSALGL HHHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA