Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081127

Identifier: 99081127

GI number: 99081127

Start: 1383350

End: 1383850

Strand: Reverse

Name: 99081127

Synonym: TM1040_1286

Alternate gene names: NA

Gene position: 1383850-1383350 (Counterclockwise)

Preceding gene: 99081128

Following gene: 99081126

Centisome position: 43.23

GC content: 56.29

Gene sequence:

>501_bases
ATGAAAGCGCGCATTCAAAACGACGTTGCAGTCGATGTGCATCCTGCACCCGAGACAGCATTTCACCCCAGCATTGCTGC
GCAGTTCGAAGCGGTGCCGGACGAAGTAGGGCTAGGCTGGCGGCGCGATGCGCAAGGCACTTGGGTAGCGCCACCTGAGC
CGGGACCATCAAATGAGCCGAACTCTGGGCAAATGCGAACCAGTGTAACCCGCACCGAATACTACGGTCTGTTTACCCCT
GATGAGGAAGCAATGATCCGTATCGCGGCATCTGAACAGGTCACCTCTGACAAGCTTAACGCCGCAGATGCGCCGGAAAA
GGCTCGCTTGATGGGGGTCGCCAAATTGGCAGTCATGTTGCAGCGGATTGATGCGCTCGCACCAACTGACAATGTTGATC
TGGGTAATCCGCAAATTCAGGCGGGACTAGATCTGCTGGTTGCAGCTGGGCTTTTGACGCCAGAACGAAAGGCGGAAATC
TCGAGCGGTGTCGAGGCATAA

Upstream 100 bases:

>100_bases
TCCGGAGGTCGCAACCACGGCGGCATTGGCGGCGGTGGCGGCGGCGCCCGCGGTGATGGCGGCAAAGGCGGACATGGCCT
CGTGATTGTGGAGTGGTAAA

Downstream 100 bases:

>100_bases
ATGGCGCTTGATACGTCATGGTGCATCAAGGGTGGTTCGCGTGGCTATGTAACCACGCGAACCGTAACCTGGCACCTGAT
GTGGAAAACATCACCATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKARIQNDVAVDVHPAPETAFHPSIAAQFEAVPDEVGLGWRRDAQGTWVAPPEPGPSNEPNSGQMRTSVTRTEYYGLFTP
DEEAMIRIAASEQVTSDKLNAADAPEKARLMGVAKLAVMLQRIDALAPTDNVDLGNPQIQAGLDLLVAAGLLTPERKAEI
SSGVEA

Sequences:

>Translated_166_residues
MKARIQNDVAVDVHPAPETAFHPSIAAQFEAVPDEVGLGWRRDAQGTWVAPPEPGPSNEPNSGQMRTSVTRTEYYGLFTP
DEEAMIRIAASEQVTSDKLNAADAPEKARLMGVAKLAVMLQRIDALAPTDNVDLGNPQIQAGLDLLVAAGLLTPERKAEI
SSGVEA
>Mature_166_residues
MKARIQNDVAVDVHPAPETAFHPSIAAQFEAVPDEVGLGWRRDAQGTWVAPPEPGPSNEPNSGQMRTSVTRTEYYGLFTP
DEEAMIRIAASEQVTSDKLNAADAPEKARLMGVAKLAVMLQRIDALAPTDNVDLGNPQIQAGLDLLVAAGLLTPERKAEI
SSGVEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17712; Mature: 17712

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARIQNDVAVDVHPAPETAFHPSIAAQFEAVPDEVGLGWRRDAQGTWVAPPEPGPSNEP
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCCCCCC
NSGQMRTSVTRTEYYGLFTPDEEAMIRIAASEQVTSDKLNAADAPEKARLMGVAKLAVML
CCCCEEEEEEHHHEEEEECCCHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QRIDALAPTDNVDLGNPQIQAGLDLLVAAGLLTPERKAEISSGVEA
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MKARIQNDVAVDVHPAPETAFHPSIAAQFEAVPDEVGLGWRRDAQGTWVAPPEPGPSNEP
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCCCCCC
NSGQMRTSVTRTEYYGLFTPDEEAMIRIAASEQVTSDKLNAADAPEKARLMGVAKLAVML
CCCCEEEEEEHHHEEEEECCCHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QRIDALAPTDNVDLGNPQIQAGLDLLVAAGLLTPERKAEISSGVEA
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA