| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081127
Identifier: 99081127
GI number: 99081127
Start: 1383350
End: 1383850
Strand: Reverse
Name: 99081127
Synonym: TM1040_1286
Alternate gene names: NA
Gene position: 1383850-1383350 (Counterclockwise)
Preceding gene: 99081128
Following gene: 99081126
Centisome position: 43.23
GC content: 56.29
Gene sequence:
>501_bases ATGAAAGCGCGCATTCAAAACGACGTTGCAGTCGATGTGCATCCTGCACCCGAGACAGCATTTCACCCCAGCATTGCTGC GCAGTTCGAAGCGGTGCCGGACGAAGTAGGGCTAGGCTGGCGGCGCGATGCGCAAGGCACTTGGGTAGCGCCACCTGAGC CGGGACCATCAAATGAGCCGAACTCTGGGCAAATGCGAACCAGTGTAACCCGCACCGAATACTACGGTCTGTTTACCCCT GATGAGGAAGCAATGATCCGTATCGCGGCATCTGAACAGGTCACCTCTGACAAGCTTAACGCCGCAGATGCGCCGGAAAA GGCTCGCTTGATGGGGGTCGCCAAATTGGCAGTCATGTTGCAGCGGATTGATGCGCTCGCACCAACTGACAATGTTGATC TGGGTAATCCGCAAATTCAGGCGGGACTAGATCTGCTGGTTGCAGCTGGGCTTTTGACGCCAGAACGAAAGGCGGAAATC TCGAGCGGTGTCGAGGCATAA
Upstream 100 bases:
>100_bases TCCGGAGGTCGCAACCACGGCGGCATTGGCGGCGGTGGCGGCGGCGCCCGCGGTGATGGCGGCAAAGGCGGACATGGCCT CGTGATTGTGGAGTGGTAAA
Downstream 100 bases:
>100_bases ATGGCGCTTGATACGTCATGGTGCATCAAGGGTGGTTCGCGTGGCTATGTAACCACGCGAACCGTAACCTGGCACCTGAT GTGGAAAACATCACCATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MKARIQNDVAVDVHPAPETAFHPSIAAQFEAVPDEVGLGWRRDAQGTWVAPPEPGPSNEPNSGQMRTSVTRTEYYGLFTP DEEAMIRIAASEQVTSDKLNAADAPEKARLMGVAKLAVMLQRIDALAPTDNVDLGNPQIQAGLDLLVAAGLLTPERKAEI SSGVEA
Sequences:
>Translated_166_residues MKARIQNDVAVDVHPAPETAFHPSIAAQFEAVPDEVGLGWRRDAQGTWVAPPEPGPSNEPNSGQMRTSVTRTEYYGLFTP DEEAMIRIAASEQVTSDKLNAADAPEKARLMGVAKLAVMLQRIDALAPTDNVDLGNPQIQAGLDLLVAAGLLTPERKAEI SSGVEA >Mature_166_residues MKARIQNDVAVDVHPAPETAFHPSIAAQFEAVPDEVGLGWRRDAQGTWVAPPEPGPSNEPNSGQMRTSVTRTEYYGLFTP DEEAMIRIAASEQVTSDKLNAADAPEKARLMGVAKLAVMLQRIDALAPTDNVDLGNPQIQAGLDLLVAAGLLTPERKAEI SSGVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17712; Mature: 17712
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARIQNDVAVDVHPAPETAFHPSIAAQFEAVPDEVGLGWRRDAQGTWVAPPEPGPSNEP CCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCCCCCC NSGQMRTSVTRTEYYGLFTPDEEAMIRIAASEQVTSDKLNAADAPEKARLMGVAKLAVML CCCCEEEEEEHHHEEEEECCCHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QRIDALAPTDNVDLGNPQIQAGLDLLVAAGLLTPERKAEISSGVEA HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCC >Mature Secondary Structure MKARIQNDVAVDVHPAPETAFHPSIAAQFEAVPDEVGLGWRRDAQGTWVAPPEPGPSNEP CCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCCCCCC NSGQMRTSVTRTEYYGLFTPDEEAMIRIAASEQVTSDKLNAADAPEKARLMGVAKLAVML CCCCEEEEEEHHHEEEEECCCHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QRIDALAPTDNVDLGNPQIQAGLDLLVAAGLLTPERKAEISSGVEA HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA