| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is trpG [H]
Identifier: 99080982
GI number: 99080982
Start: 1227024
End: 1227605
Strand: Reverse
Name: trpG [H]
Synonym: TM1040_1141
Alternate gene names: 99080982
Gene position: 1227605-1227024 (Counterclockwise)
Preceding gene: 99080984
Following gene: 99080981
Centisome position: 38.35
GC content: 59.62
Gene sequence:
>582_bases ATGTTGCTGCTTATCGACAACTACGACTCCTTCACCTACAACCTCGTGCATTATCTGGGCGAATTGGGCGCCGAGATCGA GGTCTGGCGAAACGATGCGTTGGACGTGCAGCAAGCCATGGCGATGAAGCCTGCGGGCATCCTGTTGAGCCCTGGCCCCT GTGACCCGGATCAGGCCGGGATCTGCCTTGCATTGACAGAGGCCGCCGCCGAAACCCGCACGCCGCTTTTGGGAGTCTGC CTTGGTCATCAGACCATCGGCCAGTCTTTTGGCGGCAAGGTCGTGCGCTGCCATGAGATCGTGCATGGCAAGATGGGCAA AATGCACCACACCGACAAAGGTCTCTTCAAGGGTCTGCCGTCGCCCTTTGATGCCACCCGCTATCACTCACTGGTGGTGG AGCGCGAGAGCCTGCCCGACTGCCTGGAGATCACCGCAGAGCTGGAGGATGGCACCATCATGGGGCTGCAGCACAAGGAG CTGCCCATCCACGGCGTGCAGTTCCACCCGGAATCCATTGCCTCCGAGCATGGGCATGCGCTGCTGCAAAACTTCCTGAA TGAAATGAAAGTGCCGGCATGA
Upstream 100 bases:
>100_bases ATGTGCCCTTGACGCTGCCGCGCATCCCTGAACATGTATGGTCCCACACACTATACTGCGGCGCGCACCCCGCCCGCCAC CCTTAAAAGAGCGTCCCAAG
Downstream 100 bases:
>100_bases GTGATGCGTTGAAACCCCTGATCGGTCTGGCCGCGGATCGCGCCCTGACCCGAACCGAAGCCGAAACCGCCTTTGCCGCG CTGTTCAATGGCGAAGCCAC
Product: anthranilate synthase component II
Products: NA
Alternate protein names: Anthranilate synthase component II; Glutamine amido-transferase [H]
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MLLLIDNYDSFTYNLVHYLGELGAEIEVWRNDALDVQQAMAMKPAGILLSPGPCDPDQAGICLALTEAAAETRTPLLGVC LGHQTIGQSFGGKVVRCHEIVHGKMGKMHHTDKGLFKGLPSPFDATRYHSLVVERESLPDCLEITAELEDGTIMGLQHKE LPIHGVQFHPESIASEHGHALLQNFLNEMKVPA
Sequences:
>Translated_193_residues MLLLIDNYDSFTYNLVHYLGELGAEIEVWRNDALDVQQAMAMKPAGILLSPGPCDPDQAGICLALTEAAAETRTPLLGVC LGHQTIGQSFGGKVVRCHEIVHGKMGKMHHTDKGLFKGLPSPFDATRYHSLVVERESLPDCLEITAELEDGTIMGLQHKE LPIHGVQFHPESIASEHGHALLQNFLNEMKVPA >Mature_193_residues MLLLIDNYDSFTYNLVHYLGELGAEIEVWRNDALDVQQAMAMKPAGILLSPGPCDPDQAGICLALTEAAAETRTPLLGVC LGHQTIGQSFGGKVVRCHEIVHGKMGKMHHTDKGLFKGLPSPFDATRYHSLVVERESLPDCLEITAELEDGTIMGLQHKE LPIHGVQFHPESIASEHGHALLQNFLNEMKVPA
Specific function: Participates in the tryptophan-dependent indole-3-acetic acid production, which is a phytohormone released by A.brasilense [H]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI18105007, Length=184, Percent_Identity=32.6086956521739, Blast_Score=75, Evalue=4e-14, Organism=Escherichia coli, GI1789760, Length=188, Percent_Identity=55.8510638297872, Blast_Score=218, Evalue=2e-58, Organism=Escherichia coli, GI1787517, Length=188, Percent_Identity=37.7659574468085, Blast_Score=126, Evalue=9e-31, Organism=Escherichia coli, GI1786215, Length=155, Percent_Identity=29.0322580645161, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788854, Length=194, Percent_Identity=26.2886597938144, Blast_Score=65, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322638, Length=190, Percent_Identity=45.2631578947368, Blast_Score=178, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6324361, Length=208, Percent_Identity=35.5769230769231, Blast_Score=95, Evalue=9e-21, Organism=Saccharomyces cerevisiae, GI6323873, Length=147, Percent_Identity=30.6122448979592, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 21129; Mature: 21129
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLIDNYDSFTYNLVHYLGELGAEIEVWRNDALDVQQAMAMKPAGILLSPGPCDPDQAG CEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCEEECCCCCCCCCCC ICLALTEAAAETRTPLLGVCLGHQTIGQSFGGKVVRCHEIVHGKMGKMHHTDKGLFKGLP EEEEEEHHHHHHCCCEEEEECCHHHHHHHCCCCEEEHHHHHHCCCCCCCCCCCHHHCCCC SPFDATRYHSLVVERESLPDCLEITAELEDGTIMGLQHKELPIHGVQFHPESIASEHGHA CCCCHHHHHHHEEECCCCCHHHHHHEECCCCEEECCCCCCCCCCCEEECHHHHHHHHHHH LLQNFLNEMKVPA HHHHHHHHHCCCC >Mature Secondary Structure MLLLIDNYDSFTYNLVHYLGELGAEIEVWRNDALDVQQAMAMKPAGILLSPGPCDPDQAG CEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCEEECCCCCCCCCCC ICLALTEAAAETRTPLLGVCLGHQTIGQSFGGKVVRCHEIVHGKMGKMHHTDKGLFKGLP EEEEEEHHHHHHCCCEEEEECCHHHHHHHCCCCEEEHHHHHHCCCCCCCCCCCHHHCCCC SPFDATRYHSLVVERESLPDCLEITAELEDGTIMGLQHKELPIHGVQFHPESIASEHGHA CCCCHHHHHHHEEECCCCCHHHHHHEECCCCEEECCCCCCCCCCCEEECHHHHHHHHHHH LLQNFLNEMKVPA HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1896020 [H]