| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is trpE [H]
Identifier: 99080984
GI number: 99080984
Start: 1229411
End: 1230922
Strand: Reverse
Name: trpE [H]
Synonym: TM1040_1143
Alternate gene names: 99080984
Gene position: 1230922-1229411 (Counterclockwise)
Preceding gene: 99080985
Following gene: 99080982
Centisome position: 38.46
GC content: 62.96
Gene sequence:
>1512_bases ATGGCCCTGATCCCCGATTTCGACAGTTTCGCCAAAGCCTATGAGGCGGGCGAAAACCAGGTGGTCTACACACGGCTTGC CGCCGATCTGGATACGCCCGTCTCCTTGATGCTGAAGCTCACCGGCGCGCAGAAGGATGCCTTCATGCTGGAATCGGTGA CCGGCGGCGAGGTCCGCGGGCGCTATTCCATCATCGGCATGAAGCCTGACCTGATCTGGCGTGCGCGGGGCGAACAGGCC GAAATCAACCGCGCCGCGCGGTTCGATCCCGAGGGCTTTGCCCCGCTCGACGGCAACCCACTTGATACACTGCGCGCGCT ACTGGCCGAGAGCCGCATCGACCTGCCGGATGATCTGCCACAGGCGGCGGCGGGGCTGTTTGGCTATCTGGGCTATGACA TGATCCGCCATGTGGAGCATCTGCCGGATGTGAACCCCGACCCGCTTGGCCTGCCGGACGCGGTGATGATCCGCCCCTCC GTGGTGGCCGTGCTGGACGGTGTCAAAGGCGAGGTCACAGTGGTCTCTCCCGCCTGGGTCAGCGAAGGCCAGTCGGCGCG CGCGGCCTATGCTCAGGCTGCCGAACGCGTGATGGATGCGGTGCGTGATCTTGAACGTGCCATGCCCGCCGAGACCCGCG ATCTGGGCGAGGCGCGCGAGGTCGCGCCCCCGGTCTCCAACTTCACCAAGGACGGCTACATGGCCGCCGTGGAGAAGGCC AAGGACTACATCCGTGCCGGCGACATCTTTCAGGTAGTGCCCGCACAGCGCTGGACGCAGGAGTTCCCGCAGCCGCCCTT CGCGCTCTATCGTTCGCTGCGACGCACCAACCCCTCGCCGTTCATGTTCTACTTCAACTTCGGCGGTTTTCAGGTGATCG GCGCCAGCCCCGAGATCCTCGTTCGGGTCTTTGGCAACGAGGTCACCATTCGCCCCATTGCTGGCACCCGTCCGCGCGGC GCAACCCCCGAAGAAGACAAAGCGCTGGAACAGGATCTGCTTGCCGACAAGAAAGAGTTGGCCGAGCACCTGATGCTCTT GGATCTGGGCCGTAACGACGTGGGCCGCGTTGCCAAGATCGGCACCGTGAAACCCACCGAGGAATTCATCATCGAGCGCT ACAGCCACGTGATGCATATCGTTTCGAATGTTGTTGGCGAACTCCACGAGGACAAAGACGCGCTCGATGCATTTTTTGCA GGCATGCCTGCGGGTACGGTTTCCGGAGCGCCCAAGGTGCGTGCGATGGAGATCATCGACGAGCTCGAACCCGAAAAGCG CGGCATCTATGGCGGTGGCGTCGGCTATTTCAGCGCTGGCGGCGACATGGACATGTGTATCGCGCTGCGCACAGCCATCG TGAAGGATCAGAACCTCTATATTCAGGCCGGGGGCGGCGTCGTCTATGACAGCGACCCGGAGGCCGAATATATGGAGACC GTGCATAAATCGAACGCGATCCGCCGTGCGGCTGCAGATGCGGCGCGCTTTACCGGCAACGGCAACCGCTGA
Upstream 100 bases:
>100_bases TGCAATCGGTTCAGACCCGCGCCCGTCCGCAGGTCAACCAACAGGCCGTGAATGCTGTTCACGCCAACTTCCAGTAACTC AGTACGAGGCGCATGCGCTT
Downstream 100 bases:
>100_bases GCTAAATGCCCAGCAGGGAAAAGAAAAACGCGCTCCCGAGATCCTCGTGGAGCGCGTTTTTTTTGACATTCGGCTGTCGC ATTGGCCGACGGTATTAGTT
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MALIPDFDSFAKAYEAGENQVVYTRLAADLDTPVSLMLKLTGAQKDAFMLESVTGGEVRGRYSIIGMKPDLIWRARGEQA EINRAARFDPEGFAPLDGNPLDTLRALLAESRIDLPDDLPQAAAGLFGYLGYDMIRHVEHLPDVNPDPLGLPDAVMIRPS VVAVLDGVKGEVTVVSPAWVSEGQSARAAYAQAAERVMDAVRDLERAMPAETRDLGEAREVAPPVSNFTKDGYMAAVEKA KDYIRAGDIFQVVPAQRWTQEFPQPPFALYRSLRRTNPSPFMFYFNFGGFQVIGASPEILVRVFGNEVTIRPIAGTRPRG ATPEEDKALEQDLLADKKELAEHLMLLDLGRNDVGRVAKIGTVKPTEEFIIERYSHVMHIVSNVVGELHEDKDALDAFFA GMPAGTVSGAPKVRAMEIIDELEPEKRGIYGGGVGYFSAGGDMDMCIALRTAIVKDQNLYIQAGGGVVYDSDPEAEYMET VHKSNAIRRAAADAARFTGNGNR
Sequences:
>Translated_503_residues MALIPDFDSFAKAYEAGENQVVYTRLAADLDTPVSLMLKLTGAQKDAFMLESVTGGEVRGRYSIIGMKPDLIWRARGEQA EINRAARFDPEGFAPLDGNPLDTLRALLAESRIDLPDDLPQAAAGLFGYLGYDMIRHVEHLPDVNPDPLGLPDAVMIRPS VVAVLDGVKGEVTVVSPAWVSEGQSARAAYAQAAERVMDAVRDLERAMPAETRDLGEAREVAPPVSNFTKDGYMAAVEKA KDYIRAGDIFQVVPAQRWTQEFPQPPFALYRSLRRTNPSPFMFYFNFGGFQVIGASPEILVRVFGNEVTIRPIAGTRPRG ATPEEDKALEQDLLADKKELAEHLMLLDLGRNDVGRVAKIGTVKPTEEFIIERYSHVMHIVSNVVGELHEDKDALDAFFA GMPAGTVSGAPKVRAMEIIDELEPEKRGIYGGGVGYFSAGGDMDMCIALRTAIVKDQNLYIQAGGGVVYDSDPEAEYMET VHKSNAIRRAAADAARFTGNGNR >Mature_502_residues ALIPDFDSFAKAYEAGENQVVYTRLAADLDTPVSLMLKLTGAQKDAFMLESVTGGEVRGRYSIIGMKPDLIWRARGEQAE INRAARFDPEGFAPLDGNPLDTLRALLAESRIDLPDDLPQAAAGLFGYLGYDMIRHVEHLPDVNPDPLGLPDAVMIRPSV VAVLDGVKGEVTVVSPAWVSEGQSARAAYAQAAERVMDAVRDLERAMPAETRDLGEAREVAPPVSNFTKDGYMAAVEKAK DYIRAGDIFQVVPAQRWTQEFPQPPFALYRSLRRTNPSPFMFYFNFGGFQVIGASPEILVRVFGNEVTIRPIAGTRPRGA TPEEDKALEQDLLADKKELAEHLMLLDLGRNDVGRVAKIGTVKPTEEFIIERYSHVMHIVSNVVGELHEDKDALDAFFAG MPAGTVSGAPKVRAMEIIDELEPEKRGIYGGGVGYFSAGGDMDMCIALRTAIVKDQNLYIQAGGGVVYDSDPEAEYMETV HKSNAIRRAAADAARFTGNGNR
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=386, Percent_Identity=37.8238341968912, Blast_Score=247, Evalue=1e-66, Organism=Escherichia coli, GI1788114, Length=445, Percent_Identity=32.3595505617978, Blast_Score=225, Evalue=4e-60, Organism=Escherichia coli, GI87082077, Length=263, Percent_Identity=26.9961977186312, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1786809, Length=213, Percent_Identity=28.6384976525822, Blast_Score=83, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6320935, Length=497, Percent_Identity=38.430583501006, Blast_Score=294, Evalue=3e-80, Organism=Saccharomyces cerevisiae, GI6324361, Length=422, Percent_Identity=25.1184834123223, Blast_Score=99, Evalue=2e-21,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 54951; Mature: 54820
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIPDFDSFAKAYEAGENQVVYTRLAADLDTPVSLMLKLTGAQKDAFMLESVTGGEVRG CCCCCCHHHHHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHCCCCCCHHHEECCCCCCCCC RYSIIGMKPDLIWRARGEQAEINRAARFDPEGFAPLDGNPLDTLRALLAESRIDLPDDLP EEEEEECCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHH QAAAGLFGYLGYDMIRHVEHLPDVNPDPLGLPDAVMIRPSVVAVLDGVKGEVTVVSPAWV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHCCCCCCEEEECCHHH SEGQSARAAYAQAAERVMDAVRDLERAMPAETRDLGEAREVAPPVSNFTKDGYMAAVEKA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHH KDYIRAGDIFQVVPAQRWTQEFPQPPFALYRSLRRTNPSPFMFYFNFGGFQVIGASPEIL HHHHHCCCEEEECCCHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEECCCHHEE VRVFGNEVTIRPIAGTRPRGATPEEDKALEQDLLADKKELAEHLMLLDLGRNDVGRVAKI EEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCC GTVKPTEEFIIERYSHVMHIVSNVVGELHEDKDALDAFFAGMPAGTVSGAPKVRAMEIID CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH ELEPEKRGIYGGGVGYFSAGGDMDMCIALRTAIVKDQNLYIQAGGGVVYDSDPEAEYMET HCCHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCHHHHHH VHKSNAIRRAAADAARFTGNGNR HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ALIPDFDSFAKAYEAGENQVVYTRLAADLDTPVSLMLKLTGAQKDAFMLESVTGGEVRG CCCCCHHHHHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHCCCCCCHHHEECCCCCCCCC RYSIIGMKPDLIWRARGEQAEINRAARFDPEGFAPLDGNPLDTLRALLAESRIDLPDDLP EEEEEECCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHH QAAAGLFGYLGYDMIRHVEHLPDVNPDPLGLPDAVMIRPSVVAVLDGVKGEVTVVSPAWV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHCCCCCCEEEECCHHH SEGQSARAAYAQAAERVMDAVRDLERAMPAETRDLGEAREVAPPVSNFTKDGYMAAVEKA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHH KDYIRAGDIFQVVPAQRWTQEFPQPPFALYRSLRRTNPSPFMFYFNFGGFQVIGASPEIL HHHHHCCCEEEECCCHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEECCCHHEE VRVFGNEVTIRPIAGTRPRGATPEEDKALEQDLLADKKELAEHLMLLDLGRNDVGRVAKI EEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCC GTVKPTEEFIIERYSHVMHIVSNVVGELHEDKDALDAFFAGMPAGTVSGAPKVRAMEIID CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH ELEPEKRGIYGGGVGYFSAGGDMDMCIALRTAIVKDQNLYIQAGGGVVYDSDPEAEYMET HCCHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCHHHHHH VHKSNAIRRAAADAARFTGNGNR HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA