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The map label for this gene is ydhD [C]

Identifier: 99080957

GI number: 99080957

Start: 1198356

End: 1198718

Strand: Reverse

Name: ydhD [C]

Synonym: TM1040_1116

Alternate gene names: 99080957

Gene position: 1198718-1198356 (Counterclockwise)

Preceding gene: 99080958

Following gene: 99080954

Centisome position: 37.45

GC content: 56.75

Gene sequence:

>363_bases
ATGACCGACGCAAAGACCCGCATCGATGAAACCGTCAAAGCCAACGATGTTGTGCTTTACATGAAAGGCACCAAGGACAT
GCCGCAGTGCGGGTTCTCCTCGCGCGTGGCCGGTGTGCTGAACTACATCGGTGTCGACTACACCGACGTGAACGTGCTTG
CGGATGAGGACATCCGCCAGGGCATCAAGGATTATTCCGACTGGCCGACCATCCCGCAGCTCTACATCAAGGGCGAATTC
GTGGGCGGTTGCGACATCATCACCGAGATGACGCTTTCGGGCGAACTCGACGGAATGTTTGAACAAAACGGCATCAGCTT
CGACAAGGATGCCGCCGACAAGATCCGCGAAGCCAACGCCTGA

Upstream 100 bases:

>100_bases
ACCGCAATGATACCGAGCGCCGCAGCCTCGTTGCTCGGACCCAAAACCACAGTTTTCAGCGGCTCTATGAACCAGGGGCC
AGACCGAAAGGACCAATACC

Downstream 100 bases:

>100_bases
TCCGTTCGCGAGGCGCAAAACAAAAGCCCGCAGACCTCTGGGTCTCGCGGGCTTTTTTGTGGCGCGGCCTTTATATCCGG
GCGCCTGCGACATCAGCATT

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTDAKTRIDETVKANDVVLYMKGTKDMPQCGFSSRVAGVLNYIGVDYTDVNVLADEDIRQGIKDYSDWPTIPQLYIKGEF
VGGCDIITEMTLSGELDGMFEQNGISFDKDAADKIREANA

Sequences:

>Translated_120_residues
MTDAKTRIDETVKANDVVLYMKGTKDMPQCGFSSRVAGVLNYIGVDYTDVNVLADEDIRQGIKDYSDWPTIPQLYIKGEF
VGGCDIITEMTLSGELDGMFEQNGISFDKDAADKIREANA
>Mature_119_residues
TDAKTRIDETVKANDVVLYMKGTKDMPQCGFSSRVAGVLNYIGVDYTDVNVLADEDIRQGIKDYSDWPTIPQLYIKGEFV
GGCDIITEMTLSGELDGMFEQNGISFDKDAADKIREANA

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=101, Percent_Identity=52.4752475247525, Blast_Score=114, Evalue=1e-26,
Organism=Homo sapiens, GI95113651, Length=90, Percent_Identity=48.8888888888889, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1787943, Length=113, Percent_Identity=36.283185840708, Blast_Score=101, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17556042, Length=104, Percent_Identity=50.9615384615385, Blast_Score=122, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI71988153, Length=86, Percent_Identity=44.1860465116279, Blast_Score=96, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71988159, Length=84, Percent_Identity=40.4761904761905, Blast_Score=89, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6325198, Length=104, Percent_Identity=48.0769230769231, Blast_Score=115, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6321022, Length=100, Percent_Identity=44, Blast_Score=96, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6320303, Length=99, Percent_Identity=45.4545454545455, Blast_Score=95, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24642023, Length=101, Percent_Identity=49.5049504950495, Blast_Score=115, Evalue=6e-27,
Organism=Drosophila melanogaster, GI19921242, Length=95, Percent_Identity=41.0526315789474, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 13269; Mature: 13138

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAKTRIDETVKANDVVLYMKGTKDMPQCGFSSRVAGVLNYIGVDYTDVNVLADEDIRQ
CCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECHHHHH
GIKDYSDWPTIPQLYIKGEFVGGCDIITEMTLSGELDGMFEQNGISFDKDAADKIREANA
HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
TDAKTRIDETVKANDVVLYMKGTKDMPQCGFSSRVAGVLNYIGVDYTDVNVLADEDIRQ
CCCHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECHHHHH
GIKDYSDWPTIPQLYIKGEFVGGCDIITEMTLSGELDGMFEQNGISFDKDAADKIREANA
HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]