| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080958
Identifier: 99080958
GI number: 99080958
Start: 1199086
End: 1199322
Strand: Reverse
Name: 99080958
Synonym: TM1040_1117
Alternate gene names: NA
Gene position: 1199322-1199086 (Counterclockwise)
Preceding gene: 99080959
Following gene: 99080957
Centisome position: 37.47
GC content: 63.29
Gene sequence:
>237_bases ATGCCAATGCAGGCCCATGAAATCGAAGCCCTCCTGCGCGAGACCTTCCCGGATGCGCAAATTCAGGTGGGCGGCAGCGA TGGCGTTCACATGTCCGCCATGGTCATCGACGAGAGCTTTCGCGGCAAAAACCGCGTGCAGCAGCAACGCGCCGTCTATG CCGCGCTCAAGGGCAAGATGGATGGCCCCAGCGGTGAGCTGCACGCCCTCGCCCTGACCACCAAAGCGCCGGAGTAG
Upstream 100 bases:
>100_bases CGCGACAAAACAGACCTTACAATCACGGTAGACTTGCTTGCGTCCCCCGCATTGCAGCCCTACATTTTGGCCAAAGAACA CCACAGCAAGGATGCGCCCC
Downstream 100 bases:
>100_bases CATCCGGTATGGAGGCAATCTGGATCATAGGCGGCGCGATTGCGATCATTGTCGCGATCGCCCTCTTCTCGGATTTTCTC CATATTCGCGAGAAGCTCAG
Product: BolA-like protein
Products: NA
Alternate protein names: BolA-Like Protein; Conserved Domain Protein; BolA Protein; Stress-Induced Morphogen; Stress-Induced Morphogen BolA-Like Protein; Morphology/Transcription Regulator BolA Family Protein
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MPMQAHEIEALLRETFPDAQIQVGGSDGVHMSAMVIDESFRGKNRVQQQRAVYAALKGKMDGPSGELHALALTTKAPE
Sequences:
>Translated_78_residues MPMQAHEIEALLRETFPDAQIQVGGSDGVHMSAMVIDESFRGKNRVQQQRAVYAALKGKMDGPSGELHALALTTKAPE >Mature_77_residues PMQAHEIEALLRETFPDAQIQVGGSDGVHMSAMVIDESFRGKNRVQQQRAVYAALKGKMDGPSGELHALALTTKAPE
Specific function: Unknown
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8463; Mature: 8332
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMQAHEIEALLRETFPDAQIQVGGSDGVHMSAMVIDESFRGKNRVQQQRAVYAALKGKM CCCCHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC DGPSGELHALALTTKAPE CCCCCCEEEEEEECCCCC >Mature Secondary Structure PMQAHEIEALLRETFPDAQIQVGGSDGVHMSAMVIDESFRGKNRVQQQRAVYAALKGKM CCCHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC DGPSGELHALALTTKAPE CCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA