| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080636
Identifier: 99080636
GI number: 99080636
Start: 844851
End: 845414
Strand: Direct
Name: 99080636
Synonym: TM1040_0795
Alternate gene names: NA
Gene position: 844851-845414 (Clockwise)
Preceding gene: 99080635
Following gene: 99080637
Centisome position: 26.39
GC content: 62.41
Gene sequence:
>564_bases TTGGAGGTTAGGTACGAGGGACGATACCCGACCGGAGCCAACGGCGAGTATCTCCCCAGCTACGAGGTCGCAGTTGGGTG CCACATCCACGGGACCACGGCTCAGCGCGAGGCCGCGATTGAAGATCTGAAGAAGTTTCAGACGCCCGCGCCTATTCCGC AGATTGAGCGCTGGCTGGCCGAGCTTTCGGTTCTCACAGCGGGGCGCGGCACTGACGGTATCGCGGCAGAACTTCAGCTC ACCGCATACTCCTCACGCTTGGCGCAATACCCCGCTGATGTGGTCCGTCACGCGCTTTTGCGGCATTCGTGGAAGTGGTT CCCGTCGTGGGCCGAATTGGAGCGACTGTGTGAGGCTAAGGCCAGTCCTCGCCGCCACATGATCGCCGCCCTGTCTCAAC CCGCGCCAGACCCGGAACCGAAGCGCCGTCCGCCAACAAACGAGGAACGCGCCCGCATTCAGGCCATGGTTGACGAGATG TTCCCGCGCCAGTCGAGGAAAGATCGCGAGGCTGCTGTAGATATCGCCCTGCGAGGCGATTGCATGATGGGTGACCCGTC ATGA
Upstream 100 bases:
>100_bases GCCCCAAAATTCATCCGAAATCGCCGGATGGCTGGCCAAGCATACACCGGCGGACATGGACAAGGCGGCGGTATCGCGGG CGCAGTCGCACGGCGTCAAT
Downstream 100 bases:
>100_bases GCGCCCCGGAGACATGGCCCGAGATCCTTCGCCGCCACGAGCTGGAGAAGATGCGCGCGATCCACGCTCATATCGACAGC AGCCTTCCCAAGGCGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MEVRYEGRYPTGANGEYLPSYEVAVGCHIHGTTAQREAAIEDLKKFQTPAPIPQIERWLAELSVLTAGRGTDGIAAELQL TAYSSRLAQYPADVVRHALLRHSWKWFPSWAELERLCEAKASPRRHMIAALSQPAPDPEPKRRPPTNEERARIQAMVDEM FPRQSRKDREAAVDIALRGDCMMGDPS
Sequences:
>Translated_187_residues MEVRYEGRYPTGANGEYLPSYEVAVGCHIHGTTAQREAAIEDLKKFQTPAPIPQIERWLAELSVLTAGRGTDGIAAELQL TAYSSRLAQYPADVVRHALLRHSWKWFPSWAELERLCEAKASPRRHMIAALSQPAPDPEPKRRPPTNEERARIQAMVDEM FPRQSRKDREAAVDIALRGDCMMGDPS >Mature_187_residues MEVRYEGRYPTGANGEYLPSYEVAVGCHIHGTTAQREAAIEDLKKFQTPAPIPQIERWLAELSVLTAGRGTDGIAAELQL TAYSSRLAQYPADVVRHALLRHSWKWFPSWAELERLCEAKASPRRHMIAALSQPAPDPEPKRRPPTNEERARIQAMVDEM FPRQSRKDREAAVDIALRGDCMMGDPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21050; Mature: 21050
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVRYEGRYPTGANGEYLPSYEVAVGCHIHGTTAQREAAIEDLKKFQTPAPIPQIERWLA CCCEECCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH ELSVLTAGRGTDGIAAELQLTAYSSRLAQYPADVVRHALLRHSWKWFPSWAELERLCEAK HHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHC ASPRRHMIAALSQPAPDPEPKRRPPTNEERARIQAMVDEMFPRQSRKDREAAVDIALRGD CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEECC CMMGDPS EECCCCC >Mature Secondary Structure MEVRYEGRYPTGANGEYLPSYEVAVGCHIHGTTAQREAAIEDLKKFQTPAPIPQIERWLA CCCEECCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH ELSVLTAGRGTDGIAAELQLTAYSSRLAQYPADVVRHALLRHSWKWFPSWAELERLCEAK HHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHC ASPRRHMIAALSQPAPDPEPKRRPPTNEERARIQAMVDEMFPRQSRKDREAAVDIALRGD CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEECC CMMGDPS EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA