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The map label for this gene is ssb [H]

Identifier: 99080637

GI number: 99080637

Start: 845629

End: 846108

Strand: Direct

Name: ssb [H]

Synonym: TM1040_0796

Alternate gene names: 99080637

Gene position: 845629-846108 (Clockwise)

Preceding gene: 99080636

Following gene: 99080638

Centisome position: 26.42

GC content: 59.58

Gene sequence:

>480_bases
ATGATGGCTGGATCGCTGAACAAAGTTATGCTGATCGGTAACCTTGGCCGCGATCCGGAAGTTCGGACCTTCCAGAACGG
AGGCAAGGTCTGCAACCTCCGCATCGCGACCTCTGAGACCTGGAAAGACCGCAACACGGGCGAGCGCCGCGAAAAGACCG
AATGGCACTCCGTTGCGATCTTTAATGAAGGTCTGGTGCGCGTGGCCGAGCAATACCTGCGCAAAGGGTCGAAGGTCTAT
GTCGAAGGCCAGCTGCAGACCCGCAAGTGGCAGGACCAGAGCGGTCAGGACCGCTATTCAACCGAGATCGTGCTGCATGG
CTTTGGCTCCACGCTGACCATGCTGGACGGTCGCAATGGCGATGGTCAGTCCCGCGATGACGGTGGATATGGCGGCGGTC
AGGACAGCTGCGGCGGCAACCGGGGCGGTGGATACGGCTCTGGCAGTCAAAGCATCGATGACGATGAGATTCCGTTCTGA

Upstream 100 bases:

>100_bases
GCCAGGCAGCACTTGGCTCGTACATCTATTCCCGTGGCCTTCGCTGGAACCGCGCTTCTCTGGAGGCGGCATATCCCGAA
CTAACACCCAAGGAGGCCGA

Downstream 100 bases:

>100_bases
TGGCTATGAGAGGACGCCCGCTGAAAAACCGCATGCCCCCAGAGTTCTGGGAGCGCGTCGAGGTCGCCCTCGTTGTTGGT
CAGGTCACGTTCACTGAGTG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MMAGSLNKVMLIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNTGERREKTEWHSVAIFNEGLVRVAEQYLRKGSKVY
VEGQLQTRKWQDQSGQDRYSTEIVLHGFGSTLTMLDGRNGDGQSRDDGGYGGGQDSCGGNRGGGYGSGSQSIDDDEIPF

Sequences:

>Translated_159_residues
MMAGSLNKVMLIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNTGERREKTEWHSVAIFNEGLVRVAEQYLRKGSKVY
VEGQLQTRKWQDQSGQDRYSTEIVLHGFGSTLTMLDGRNGDGQSRDDGGYGGGQDSCGGNRGGGYGSGSQSIDDDEIPF
>Mature_159_residues
MMAGSLNKVMLIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNTGERREKTEWHSVAIFNEGLVRVAEQYLRKGSKVY
VEGQLQTRKWQDQSGQDRYSTEIVLHGFGSTLTMLDGRNGDGQSRDDGGYGGGQDSCGGNRGGGYGSGSQSIDDDEIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=109, Percent_Identity=33.9449541284404, Blast_Score=76, Evalue=1e-14,
Organism=Escherichia coli, GI1790494, Length=122, Percent_Identity=59.8360655737705, Blast_Score=154, Evalue=2e-39,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17457; Mature: 17457

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAGSLNKVMLIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNTGERREKTEWHSVAI
CCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCHHCCCCEEEEE
FNEGLVRVAEQYLRKGSKVYVEGQLQTRKWQDQSGQDRYSTEIVLHGFGSTLTMLDGRNG
EHHHHHHHHHHHHHCCCEEEEECCEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCC
DGQSRDDGGYGGGQDSCGGNRGGGYGSGSQSIDDDEIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMAGSLNKVMLIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNTGERREKTEWHSVAI
CCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCHHCCCCEEEEE
FNEGLVRVAEQYLRKGSKVYVEGQLQTRKWQDQSGQDRYSTEIVLHGFGSTLTMLDGRNG
EHHHHHHHHHHHHHCCCEEEEECCEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCC
DGQSRDDGGYGGGQDSCGGNRGGGYGSGSQSIDDDEIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA