Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080500

Identifier: 99080500

GI number: 99080500

Start: 706043

End: 706831

Strand: Direct

Name: 99080500

Synonym: TM1040_0659

Alternate gene names: NA

Gene position: 706043-706831 (Clockwise)

Preceding gene: 99080498

Following gene: 99080501

Centisome position: 22.06

GC content: 57.41

Gene sequence:

>789_bases
ATGGCCAACACCGAAAAACCCCCGCTTCTGGCGGTCCTGATTGACGCGGACAACATATCGGCGAAATTCGCCGGGGCCAT
GTTTGAGGAGATTGCTTCACTCGGAGAGGCGAGCATCCGCCGCATCTATGGTGATTTCTCGGGCGGCGGACCGCAGGGCT
GGAGCAAAGACAAGCTGGCGGCGTTTGCAATCGTGCCGCACCAGCAGTTTGCCAATACTACCGGGAAGAACGCCAGCGAC
ATCGCTCTGGTCATCGACGCGATGGACATTCTGCACTCAGGCCGCTTTGATGGCTTTGTGCTGATCTCCTCGGATAGCGA
TTTCACCCGACTGGCGAGCCGCATTCGCGAACAAGGGTTGGACGTCTACGGTATGGGTATGCGCAAGACACCTGCAGCCT
TCGTACGCGCCTGCAAGCGCTTCATCTATGTCGAGAACCTTTTGACCGAGGTCCCGAAAGACGTGCCCAAGCCGCAGAAA
TCAAAGCCAAAACCCTCGACGCAATCCTCGGGCGCCACTCTCGAACAGACTGCCGCGCCGCAAGACGACGAAGCCCCGGC
GGAACTTGAAGATCCGCAAAAGCTGGTCCTGCGTGCGATGGATGCGATCAGCCAAGAGGACGAGTGGTTCTCTCTTGGGC
AGATCGGTCAGTACATTACGGCGGCAAGTCCCGATTTTGACACCCGCAGTTATGGCAAGCGCAAACTGTCAGATCTGATC
GCAACCATGAAAATATTGGAAACGCGCCGTGGAGAAGGCAATCAGATCCTCGTACGGAGGCTCGACTGA

Upstream 100 bases:

>100_bases
ACCCATCGCCACTGTGCCAGCCATGCGCGCTCAGCGCTTTTCATTTGTGCACATCCGCGTATGAAGGAGAGAGACTTCCT
CACATGATACAGGACATCCA

Downstream 100 bases:

>100_bases
TGTCTGTACCGCAGGCAGCGGACGCGCCTGCGCGCATCTGGCAACGAATCGAGGGTGGCCTGATCTGTGCTGCGGGGCTT
TGGCTTTATGCGGGGGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MANTEKPPLLAVLIDADNISAKFAGAMFEEIASLGEASIRRIYGDFSGGGPQGWSKDKLAAFAIVPHQQFANTTGKNASD
IALVIDAMDILHSGRFDGFVLISSDSDFTRLASRIREQGLDVYGMGMRKTPAAFVRACKRFIYVENLLTEVPKDVPKPQK
SKPKPSTQSSGATLEQTAAPQDDEAPAELEDPQKLVLRAMDAISQEDEWFSLGQIGQYITAASPDFDTRSYGKRKLSDLI
ATMKILETRRGEGNQILVRRLD

Sequences:

>Translated_262_residues
MANTEKPPLLAVLIDADNISAKFAGAMFEEIASLGEASIRRIYGDFSGGGPQGWSKDKLAAFAIVPHQQFANTTGKNASD
IALVIDAMDILHSGRFDGFVLISSDSDFTRLASRIREQGLDVYGMGMRKTPAAFVRACKRFIYVENLLTEVPKDVPKPQK
SKPKPSTQSSGATLEQTAAPQDDEAPAELEDPQKLVLRAMDAISQEDEWFSLGQIGQYITAASPDFDTRSYGKRKLSDLI
ATMKILETRRGEGNQILVRRLD
>Mature_261_residues
ANTEKPPLLAVLIDADNISAKFAGAMFEEIASLGEASIRRIYGDFSGGGPQGWSKDKLAAFAIVPHQQFANTTGKNASDI
ALVIDAMDILHSGRFDGFVLISSDSDFTRLASRIREQGLDVYGMGMRKTPAAFVRACKRFIYVENLLTEVPKDVPKPQKS
KPKPSTQSSGATLEQTAAPQDDEAPAELEDPQKLVLRAMDAISQEDEWFSLGQIGQYITAASPDFDTRSYGKRKLSDLIA
TMKILETRRGEGNQILVRRLD

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28700; Mature: 28569

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTEKPPLLAVLIDADNISAKFAGAMFEEIASLGEASIRRIYGDFSGGGPQGWSKDKLA
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
AFAIVPHQQFANTTGKNASDIALVIDAMDILHSGRFDGFVLISSDSDFTRLASRIREQGL
EEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
DVYGMGMRKTPAAFVRACKRFIYVENLLTEVPKDVPKPQKSKPKPSTQSSGATLEQTAAP
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCC
QDDEAPAELEDPQKLVLRAMDAISQEDEWFSLGQIGQYITAASPDFDTRSYGKRKLSDLI
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ATMKILETRRGEGNQILVRRLD
HHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure 
ANTEKPPLLAVLIDADNISAKFAGAMFEEIASLGEASIRRIYGDFSGGGPQGWSKDKLA
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
AFAIVPHQQFANTTGKNASDIALVIDAMDILHSGRFDGFVLISSDSDFTRLASRIREQGL
EEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC
DVYGMGMRKTPAAFVRACKRFIYVENLLTEVPKDVPKPQKSKPKPSTQSSGATLEQTAAP
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCC
QDDEAPAELEDPQKLVLRAMDAISQEDEWFSLGQIGQYITAASPDFDTRSYGKRKLSDLI
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ATMKILETRRGEGNQILVRRLD
HHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA