| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080501
Identifier: 99080501
GI number: 99080501
Start: 706831
End: 707241
Strand: Direct
Name: 99080501
Synonym: TM1040_0660
Alternate gene names: NA
Gene position: 706831-707241 (Clockwise)
Preceding gene: 99080500
Following gene: 99080502
Centisome position: 22.08
GC content: 61.07
Gene sequence:
>411_bases ATGTCTGTACCGCAGGCAGCGGACGCGCCTGCGCGCATCTGGCAACGAATCGAGGGTGGCCTGATCTGTGCTGCGGGGCT TTGGCTTTATGCGGGGGCGGAGGCGGTGCTGCCGATCTGGGGCGCGATGCTTCTGTTCTTTGCCCCTGACCTCAGCTGCG TGGGTTATCTGTTTGGCCGACGCGCCGGGGCGTTTTGTTACAATCTGGTCCATCTCTACGCTGCTGGGGTCGTAACATTG GCCTTGGCGCATCTGTGGCAGTCCCCTCTGTTGTGGGAGATCGCCGCGCTTTGGCTGGCGCATTGCGGATTTGATCGGCT GCTCGGCTATGGGTTGAAATCCACGCAAGGGTTTGAATTCACTCACCTTGGGCGCATCGGTCGGGCGCGTGAACCACGCT CTGATGCCTAA
Upstream 100 bases:
>100_bases GTTATGGCAAGCGCAAACTGTCAGATCTGATCGCAACCATGAAAATATTGGAAACGCGCCGTGGAGAAGGCAATCAGATC CTCGTACGGAGGCTCGACTG
Downstream 100 bases:
>100_bases GGCGCCGGGGCGAGCTCTCCTCACAGGGTCTCTTCTTGCAACACAGCCGCGTGAGAGTGGCTTCGCGCGCGTCAGAACTT GCGTATCGTTGTGGCACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSVPQAADAPARIWQRIEGGLICAAGLWLYAGAEAVLPIWGAMLLFFAPDLSCVGYLFGRRAGAFCYNLVHLYAAGVVTL ALAHLWQSPLLWEIAALWLAHCGFDRLLGYGLKSTQGFEFTHLGRIGRAREPRSDA
Sequences:
>Translated_136_residues MSVPQAADAPARIWQRIEGGLICAAGLWLYAGAEAVLPIWGAMLLFFAPDLSCVGYLFGRRAGAFCYNLVHLYAAGVVTL ALAHLWQSPLLWEIAALWLAHCGFDRLLGYGLKSTQGFEFTHLGRIGRAREPRSDA >Mature_135_residues SVPQAADAPARIWQRIEGGLICAAGLWLYAGAEAVLPIWGAMLLFFAPDLSCVGYLFGRRAGAFCYNLVHLYAAGVVTLA LAHLWQSPLLWEIAALWLAHCGFDRLLGYGLKSTQGFEFTHLGRIGRAREPRSDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14862; Mature: 14731
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPQAADAPARIWQRIEGGLICAAGLWLYAGAEAVLPIWGAMLLFFAPDLSCVGYLFGR CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHH RAGAFCYNLVHLYAAGVVTLALAHLWQSPLLWEIAALWLAHCGFDRLLGYGLKSTQGFEF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCH THLGRIGRAREPRSDA HHHHHHCCCCCCCCCC >Mature Secondary Structure SVPQAADAPARIWQRIEGGLICAAGLWLYAGAEAVLPIWGAMLLFFAPDLSCVGYLFGR CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHH RAGAFCYNLVHLYAAGVVTLALAHLWQSPLLWEIAALWLAHCGFDRLLGYGLKSTQGFEF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCH THLGRIGRAREPRSDA HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA