| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080498
Identifier: 99080498
GI number: 99080498
Start: 703975
End: 704766
Strand: Direct
Name: 99080498
Synonym: TM1040_0657
Alternate gene names: NA
Gene position: 703975-704766 (Clockwise)
Preceding gene: 99080497
Following gene: 99080500
Centisome position: 21.99
GC content: 62.25
Gene sequence:
>792_bases ATGACTGAAATGACCCCGCTTGATCTGGCCCATGCGGCAATGGAAGCGGCGCCTGCCGATGATGCTGCGCGGCTGCGGTT CTTTGAACGCCTTGCGGACAGCGAACTCTTCTTGCTGCTGGACAAAGAGCCGGAAGGCGATCGGATCAGCCCCGAGATCT TTGAAACAGGCGAGGGGCGTTTTGTTCTGGTGTTTGATCGTGAAGAGCGACTGGCGCAGTTTGCCGAGCGCATCGTGCCT TATGCAGCGCTCTCCGGGCGGGTGATTGCGTCGATGTTGGCGGGGCAAGGGATCGGTCTTGGCGTCAATCTGGAAGTTGC GCCGTCATCCATCCTCATCCCGGATGCGGCGATGGGCTGGCTTGCGGAGACGCTCGCGCATGCGCCGGGCGAGGTGGAGG CTGCGATCTCGGAGGTGCACCCTCCCCGTGGGTTGCCAGAGACCCTTCTGGCGGCGCTCGACACAAAGCTTGCCACAGCG ACGGGGCTGGCGCGCATGGCCTATCTTGCAGCCGTGAACTATGAGAGCGGCGGCAGCGGCCACCTTCTGGCCTTTATCGG AGCGGAACCCGGCGCGGAGCCTGCATTGGCGAAGGCCGCAGGAGAGGCACTGACGTTTTCCGGGATCGAAGCCGGGGCTT TGGACGTGGGCTTTTTTGCGGCAAGCGAAGAGATTTCCGCAAGGCTAGCGCGTGTCGGGCTGCGATTTGATCTTCCTGAG GTGGAAACCGGGCAGATCTACCAGCCGCAAAGACCCGGCAGTGATCCAGAAAAGCCTCCTCGCCTGAAGTGA
Upstream 100 bases:
>100_bases CATCCCTCTTGGCGCAATACGGCTTGGTTGAAACGAAATCCCTGGTTCGAAGCGGAGCTTCTTCCGGTTCTGCGCGCAAG GGTGAAGGAGCAGATGCAAC
Downstream 100 bases:
>100_bases TCGCTGAACGCGCCCTGGAGGGATGCGGGCCGGCGCGGGGGGATCGCGCCCACTGCCAATGTTCTGCCTGTCCGCAGTCC CCGAAAACGGAACTGGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTEMTPLDLAHAAMEAAPADDAARLRFFERLADSELFLLLDKEPEGDRISPEIFETGEGRFVLVFDREERLAQFAERIVP YAALSGRVIASMLAGQGIGLGVNLEVAPSSILIPDAAMGWLAETLAHAPGEVEAAISEVHPPRGLPETLLAALDTKLATA TGLARMAYLAAVNYESGGSGHLLAFIGAEPGAEPALAKAAGEALTFSGIEAGALDVGFFAASEEISARLARVGLRFDLPE VETGQIYQPQRPGSDPEKPPRLK
Sequences:
>Translated_263_residues MTEMTPLDLAHAAMEAAPADDAARLRFFERLADSELFLLLDKEPEGDRISPEIFETGEGRFVLVFDREERLAQFAERIVP YAALSGRVIASMLAGQGIGLGVNLEVAPSSILIPDAAMGWLAETLAHAPGEVEAAISEVHPPRGLPETLLAALDTKLATA TGLARMAYLAAVNYESGGSGHLLAFIGAEPGAEPALAKAAGEALTFSGIEAGALDVGFFAASEEISARLARVGLRFDLPE VETGQIYQPQRPGSDPEKPPRLK >Mature_262_residues TEMTPLDLAHAAMEAAPADDAARLRFFERLADSELFLLLDKEPEGDRISPEIFETGEGRFVLVFDREERLAQFAERIVPY AALSGRVIASMLAGQGIGLGVNLEVAPSSILIPDAAMGWLAETLAHAPGEVEAAISEVHPPRGLPETLLAALDTKLATAT GLARMAYLAAVNYESGGSGHLLAFIGAEPGAEPALAKAAGEALTFSGIEAGALDVGFFAASEEISARLARVGLRFDLPEV ETGQIYQPQRPGSDPEKPPRLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27802; Mature: 27671
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEMTPLDLAHAAMEAAPADDAARLRFFERLADSELFLLLDKEPEGDRISPEIFETGEGR CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCCCCC FVLVFDREERLAQFAERIVPYAALSGRVIASMLAGQGIGLGVNLEVAPSSILIPDAAMGW EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECCCHHHHH LAETLAHAPGEVEAAISEVHPPRGLPETLLAALDTKLATATGLARMAYLAAVNYESGGSG HHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC HLLAFIGAEPGAEPALAKAAGEALTFSGIEAGALDVGFFAASEEISARLARVGLRFDLPE CEEEEECCCCCCCHHHHHHCCCEEEECCCCCCCEEEEHHHCCHHHHHHHHHHCCEECCCC VETGQIYQPQRPGSDPEKPPRLK CCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure TEMTPLDLAHAAMEAAPADDAARLRFFERLADSELFLLLDKEPEGDRISPEIFETGEGR CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCCCCC FVLVFDREERLAQFAERIVPYAALSGRVIASMLAGQGIGLGVNLEVAPSSILIPDAAMGW EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECCCHHHHH LAETLAHAPGEVEAAISEVHPPRGLPETLLAALDTKLATATGLARMAYLAAVNYESGGSG HHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC HLLAFIGAEPGAEPALAKAAGEALTFSGIEAGALDVGFFAASEEISARLARVGLRFDLPE CEEEEECCCCCCCHHHHHHCCCEEEECCCCCCCEEEEHHHCCHHHHHHHHHHCCEECCCC VETGQIYQPQRPGSDPEKPPRLK CCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA