Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080498

Identifier: 99080498

GI number: 99080498

Start: 703975

End: 704766

Strand: Direct

Name: 99080498

Synonym: TM1040_0657

Alternate gene names: NA

Gene position: 703975-704766 (Clockwise)

Preceding gene: 99080497

Following gene: 99080500

Centisome position: 21.99

GC content: 62.25

Gene sequence:

>792_bases
ATGACTGAAATGACCCCGCTTGATCTGGCCCATGCGGCAATGGAAGCGGCGCCTGCCGATGATGCTGCGCGGCTGCGGTT
CTTTGAACGCCTTGCGGACAGCGAACTCTTCTTGCTGCTGGACAAAGAGCCGGAAGGCGATCGGATCAGCCCCGAGATCT
TTGAAACAGGCGAGGGGCGTTTTGTTCTGGTGTTTGATCGTGAAGAGCGACTGGCGCAGTTTGCCGAGCGCATCGTGCCT
TATGCAGCGCTCTCCGGGCGGGTGATTGCGTCGATGTTGGCGGGGCAAGGGATCGGTCTTGGCGTCAATCTGGAAGTTGC
GCCGTCATCCATCCTCATCCCGGATGCGGCGATGGGCTGGCTTGCGGAGACGCTCGCGCATGCGCCGGGCGAGGTGGAGG
CTGCGATCTCGGAGGTGCACCCTCCCCGTGGGTTGCCAGAGACCCTTCTGGCGGCGCTCGACACAAAGCTTGCCACAGCG
ACGGGGCTGGCGCGCATGGCCTATCTTGCAGCCGTGAACTATGAGAGCGGCGGCAGCGGCCACCTTCTGGCCTTTATCGG
AGCGGAACCCGGCGCGGAGCCTGCATTGGCGAAGGCCGCAGGAGAGGCACTGACGTTTTCCGGGATCGAAGCCGGGGCTT
TGGACGTGGGCTTTTTTGCGGCAAGCGAAGAGATTTCCGCAAGGCTAGCGCGTGTCGGGCTGCGATTTGATCTTCCTGAG
GTGGAAACCGGGCAGATCTACCAGCCGCAAAGACCCGGCAGTGATCCAGAAAAGCCTCCTCGCCTGAAGTGA

Upstream 100 bases:

>100_bases
CATCCCTCTTGGCGCAATACGGCTTGGTTGAAACGAAATCCCTGGTTCGAAGCGGAGCTTCTTCCGGTTCTGCGCGCAAG
GGTGAAGGAGCAGATGCAAC

Downstream 100 bases:

>100_bases
TCGCTGAACGCGCCCTGGAGGGATGCGGGCCGGCGCGGGGGGATCGCGCCCACTGCCAATGTTCTGCCTGTCCGCAGTCC
CCGAAAACGGAACTGGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTEMTPLDLAHAAMEAAPADDAARLRFFERLADSELFLLLDKEPEGDRISPEIFETGEGRFVLVFDREERLAQFAERIVP
YAALSGRVIASMLAGQGIGLGVNLEVAPSSILIPDAAMGWLAETLAHAPGEVEAAISEVHPPRGLPETLLAALDTKLATA
TGLARMAYLAAVNYESGGSGHLLAFIGAEPGAEPALAKAAGEALTFSGIEAGALDVGFFAASEEISARLARVGLRFDLPE
VETGQIYQPQRPGSDPEKPPRLK

Sequences:

>Translated_263_residues
MTEMTPLDLAHAAMEAAPADDAARLRFFERLADSELFLLLDKEPEGDRISPEIFETGEGRFVLVFDREERLAQFAERIVP
YAALSGRVIASMLAGQGIGLGVNLEVAPSSILIPDAAMGWLAETLAHAPGEVEAAISEVHPPRGLPETLLAALDTKLATA
TGLARMAYLAAVNYESGGSGHLLAFIGAEPGAEPALAKAAGEALTFSGIEAGALDVGFFAASEEISARLARVGLRFDLPE
VETGQIYQPQRPGSDPEKPPRLK
>Mature_262_residues
TEMTPLDLAHAAMEAAPADDAARLRFFERLADSELFLLLDKEPEGDRISPEIFETGEGRFVLVFDREERLAQFAERIVPY
AALSGRVIASMLAGQGIGLGVNLEVAPSSILIPDAAMGWLAETLAHAPGEVEAAISEVHPPRGLPETLLAALDTKLATAT
GLARMAYLAAVNYESGGSGHLLAFIGAEPGAEPALAKAAGEALTFSGIEAGALDVGFFAASEEISARLARVGLRFDLPEV
ETGQIYQPQRPGSDPEKPPRLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27802; Mature: 27671

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEMTPLDLAHAAMEAAPADDAARLRFFERLADSELFLLLDKEPEGDRISPEIFETGEGR
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCCCCC
FVLVFDREERLAQFAERIVPYAALSGRVIASMLAGQGIGLGVNLEVAPSSILIPDAAMGW
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECCCHHHHH
LAETLAHAPGEVEAAISEVHPPRGLPETLLAALDTKLATATGLARMAYLAAVNYESGGSG
HHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
HLLAFIGAEPGAEPALAKAAGEALTFSGIEAGALDVGFFAASEEISARLARVGLRFDLPE
CEEEEECCCCCCCHHHHHHCCCEEEECCCCCCCEEEEHHHCCHHHHHHHHHHCCEECCCC
VETGQIYQPQRPGSDPEKPPRLK
CCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEMTPLDLAHAAMEAAPADDAARLRFFERLADSELFLLLDKEPEGDRISPEIFETGEGR
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCCCCC
FVLVFDREERLAQFAERIVPYAALSGRVIASMLAGQGIGLGVNLEVAPSSILIPDAAMGW
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECCCHHHHH
LAETLAHAPGEVEAAISEVHPPRGLPETLLAALDTKLATATGLARMAYLAAVNYESGGSG
HHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
HLLAFIGAEPGAEPALAKAAGEALTFSGIEAGALDVGFFAASEEISARLARVGLRFDLPE
CEEEEECCCCCCCHHHHHHCCCEEEECCCCCCCEEEEHHHCCHHHHHHHHHHCCEECCCC
VETGQIYQPQRPGSDPEKPPRLK
CCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA