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The map label for this gene is 99080497

Identifier: 99080497

GI number: 99080497

Start: 703380

End: 703982

Strand: Direct

Name: 99080497

Synonym: TM1040_0656

Alternate gene names: NA

Gene position: 703380-703982 (Clockwise)

Preceding gene: 99080492

Following gene: 99080498

Centisome position: 21.97

GC content: 62.35

Gene sequence:

>603_bases
ATGCAGAGCAATACGGATGAGCTCAAGAAAGAGATCTCCGCCTGCCGGTTGTGCGCGGCCCGGTTTGCCTCGACGCGGAC
CGCGCATGAGCCGCGCCCGGTGGTGTGGTTTGAGCCAAGCGCCCGGATATTGATCGCAGGGCAGGCGCCGGGGATGCGGG
TTCACCAAAGTGGACGCCCGTTCACGGATTCCTCGGGCGACCGGCTGCGAGAGTGGCTTGGCCTGAGCGAGGATTGCTTT
TACGACACCAGCCGCGTGGCCATTGTGCCCATGGCCTTTTGTTTTCCCGGCTATGACGCCAAAACAGCCGATCTGCCGCC
GCCCAGGATCTGTGGCGAGACTTGGCATGATCGGGTGATGTCGGCGCTGGGGAAGCTGCGGCTGCGGATCCTCGTTGGCG
GGCATGCGCACCGCTATCATCTCGGAACCCGCCTTGGGGTCACCGAACTTGTGAAGGGCTGGCGCAGCTTGCCGGAGGGG
GTCTTTGCCTTGCCTCATCCCTCTTGGCGCAATACGGCTTGGTTGAAACGAAATCCCTGGTTCGAAGCGGAGCTTCTTCC
GGTTCTGCGCGCAAGGGTGAAGGAGCAGATGCAACATGACTGA

Upstream 100 bases:

>100_bases
TTTGAGCGATGCAGGGATGCTGGCTGGAAACTGTTGTGGCAAATCGACAGTTTATGCGCGCAGGCAACGGCGCACGAGAG
CCTGCCAACAGGGGAGAGCG

Downstream 100 bases:

>100_bases
AATGACCCCGCTTGATCTGGCCCATGCGGCAATGGAAGCGGCGCCTGCCGATGATGCTGCGCGGCTGCGGTTCTTTGAAC
GCCTTGCGGACAGCGAACTC

Product: uracil-DNA glycosylase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MQSNTDELKKEISACRLCAARFASTRTAHEPRPVVWFEPSARILIAGQAPGMRVHQSGRPFTDSSGDRLREWLGLSEDCF
YDTSRVAIVPMAFCFPGYDAKTADLPPPRICGETWHDRVMSALGKLRLRILVGGHAHRYHLGTRLGVTELVKGWRSLPEG
VFALPHPSWRNTAWLKRNPWFEAELLPVLRARVKEQMQHD

Sequences:

>Translated_200_residues
MQSNTDELKKEISACRLCAARFASTRTAHEPRPVVWFEPSARILIAGQAPGMRVHQSGRPFTDSSGDRLREWLGLSEDCF
YDTSRVAIVPMAFCFPGYDAKTADLPPPRICGETWHDRVMSALGKLRLRILVGGHAHRYHLGTRLGVTELVKGWRSLPEG
VFALPHPSWRNTAWLKRNPWFEAELLPVLRARVKEQMQHD
>Mature_200_residues
MQSNTDELKKEISACRLCAARFASTRTAHEPRPVVWFEPSARILIAGQAPGMRVHQSGRPFTDSSGDRLREWLGLSEDCF
YDTSRVAIVPMAFCFPGYDAKTADLPPPRICGETWHDRVMSALGKLRLRILVGGHAHRYHLGTRLGVTELVKGWRSLPEG
VFALPHPSWRNTAWLKRNPWFEAELLPVLRARVKEQMQHD

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 22725; Mature: 22725

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSNTDELKKEISACRLCAARFASTRTAHEPRPVVWFEPSARILIAGQAPGMRVHQSGRP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCEEECCCCC
FTDSSGDRLREWLGLSEDCFYDTSRVAIVPMAFCFPGYDAKTADLPPPRICGETWHDRVM
CCCCCHHHHHHHHCCCCHHHCCCCCCEEEHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHH
SALGKLRLRILVGGHAHRYHLGTRLGVTELVKGWRSLPEGVFALPHPSWRNTAWLKRNPW
HHHHHHEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCC
FEAELLPVLRARVKEQMQHD
CHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQSNTDELKKEISACRLCAARFASTRTAHEPRPVVWFEPSARILIAGQAPGMRVHQSGRP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCEEECCCCC
FTDSSGDRLREWLGLSEDCFYDTSRVAIVPMAFCFPGYDAKTADLPPPRICGETWHDRVM
CCCCCHHHHHHHHCCCCHHHCCCCCCEEEHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHH
SALGKLRLRILVGGHAHRYHLGTRLGVTELVKGWRSLPEGVFALPHPSWRNTAWLKRNPW
HHHHHHEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCC
FEAELLPVLRARVKEQMQHD
CHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]