| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yqeB [C]
Identifier: 99080338
GI number: 99080338
Start: 520423
End: 521358
Strand: Reverse
Name: yqeB [C]
Synonym: TM1040_0497
Alternate gene names: 99080338
Gene position: 521358-520423 (Counterclockwise)
Preceding gene: 99080339
Following gene: 99080337
Centisome position: 16.29
GC content: 63.35
Gene sequence:
>936_bases ATGGGGTTTGACGTCGAAGCGCTGAAGGCGGCCTTAGAGGCCCATGGTCGGGTGATCCGCGTGGTGGTGGCCGAGGTCAA AGGCTCTGCGCCGCGTGAAGTCGGTGCAGCCATGCTGGTTTGGGACGGCGGGCAATCTGGCACCATTGGCGGTGGGACGC TGGAATTTGAAGCCGCAGACGCCGCAAGACGTCAGGATGCGCCATACCGGCTTTCGACGCATGCATTGGGCCCAGATCTG GGGCAATGCTGCGGGGGCGCTGTCACCCTGTTGAGCGAAGTCTACACCGAAGTGAACATCGCGCAGCTCACAGGCCAAGT GATCTCACGGGCGGTGGCTCCCGGACCGGAGCCTTTGGCGGTAAGCCGGATTCTGAACCATGCCCGCGCGCAAGGGCTTG CGCCAGCGCCACAATTGATTGCTGGCTGGATGATCGAACCGGTCGCCTGCGCGACGCGACCCTTGTGGATCTGGGGCGCC GGCCATGTGGGGCGTGCGCTTGTTGAGGTGCTGGCACCTCTGCCGGATTACGCGATCACCTGGGTCGATGTGATGCGGTC AAAGTACCCGCAGGAGATCCCCGCATCCGTCACGGCCCTACCCGCGCAGGAGCCGGGCCGTCTGGTGCCACATGCGCCCA CGGAAGCCTATCATCTGATCCTGACCTATTCCCATCAGCTGGATCTGGCGCTATGCCACCGGCTGTTGGAGCATGGGTTT GATTTTGCAGGTCTGATCGGATCCAAGACCAAATGGGCCCGGTTTCGCGCGCGCCTTGCAGCGCTGGGCCATCGCCCGGA GCAGATCGCGCGCCTTACCTGCCCGATCGGCATGCCCGAACTGGGCAAACATCCACATGCCATCGCCATCGGCGTGGCGG CAGAACTCATGGCGCTCTCGCAGCGTTTGGACTTGAAAAAGGAGCATAGCGCGTGA
Upstream 100 bases:
>100_bases GCGCTCTCGGATGCGGTGTCTCGTTTCGGCGAAGGGCATCCACATTTGAACGCGCCTGCGACGGCGGAAGAGATCTGGCG GGCAACAGAGACACTACGCC
Downstream 100 bases:
>100_bases GCACGCCTCCCCTTCTGACCCTTGACGGCCTCACCAAGGCCTATCCCGGCGTCGTCGCCAATGACCAGGTCTCCTTCACC ATCGGCACAGGCGAGGTGCA
Product: molybdenum cofactor sulfurylase
Products: NA
Alternate protein names: Molybdenum Cofactor Sulfurylase; Xanthine And Co Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Protein; Xanthine Dehydrogenase Accessory Protein; Xanthine Dehydrogenase Accessory Factor; Adenosine Deaminase; Xanthine Dehydrogenase Cofactor Insertion; XdhC Protein; Xanthine Dehydrogenase Xdh C Protein; Xanthine Dehydrogenase; Xanthine And CO Dehydrogenases Maturation Factor; XANTHINE DEHYDROGENASE Accessory Component; Xanthine Dehydrogenase XdhC; Xanthine Dehydrogenase Chaperone; Xanthine Dehydrogenase Accessory Protein Xdhc; Dehydrogenase; Chaperone XdhC; Xanthine Dehydrogenase Accessory Factor X; Xanthine Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein; Xanthine Dehydrogenase Protein C Subunit
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MGFDVEALKAALEAHGRVIRVVVAEVKGSAPREVGAAMLVWDGGQSGTIGGGTLEFEAADAARRQDAPYRLSTHALGPDL GQCCGGAVTLLSEVYTEVNIAQLTGQVISRAVAPGPEPLAVSRILNHARAQGLAPAPQLIAGWMIEPVACATRPLWIWGA GHVGRALVEVLAPLPDYAITWVDVMRSKYPQEIPASVTALPAQEPGRLVPHAPTEAYHLILTYSHQLDLALCHRLLEHGF DFAGLIGSKTKWARFRARLAALGHRPEQIARLTCPIGMPELGKHPHAIAIGVAAELMALSQRLDLKKEHSA
Sequences:
>Translated_311_residues MGFDVEALKAALEAHGRVIRVVVAEVKGSAPREVGAAMLVWDGGQSGTIGGGTLEFEAADAARRQDAPYRLSTHALGPDL GQCCGGAVTLLSEVYTEVNIAQLTGQVISRAVAPGPEPLAVSRILNHARAQGLAPAPQLIAGWMIEPVACATRPLWIWGA GHVGRALVEVLAPLPDYAITWVDVMRSKYPQEIPASVTALPAQEPGRLVPHAPTEAYHLILTYSHQLDLALCHRLLEHGF DFAGLIGSKTKWARFRARLAALGHRPEQIARLTCPIGMPELGKHPHAIAIGVAAELMALSQRLDLKKEHSA >Mature_310_residues GFDVEALKAALEAHGRVIRVVVAEVKGSAPREVGAAMLVWDGGQSGTIGGGTLEFEAADAARRQDAPYRLSTHALGPDLG QCCGGAVTLLSEVYTEVNIAQLTGQVISRAVAPGPEPLAVSRILNHARAQGLAPAPQLIAGWMIEPVACATRPLWIWGAG HVGRALVEVLAPLPDYAITWVDVMRSKYPQEIPASVTALPAQEPGRLVPHAPTEAYHLILTYSHQLDLALCHRLLEHGFD FAGLIGSKTKWARFRARLAALGHRPEQIARLTCPIGMPELGKHPHAIAIGVAAELMALSQRLDLKKEHSA
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789240, Length=291, Percent_Identity=26.1168384879725, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33182; Mature: 33051
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFDVEALKAALEAHGRVIRVVVAEVKGSAPREVGAAMLVWDGGQSGTIGGGTLEFEAAD CCCCHHHHHHHHHHCCCEEEEEEEHHCCCCCHHHCCEEEEEECCCCCCCCCCEEEEECHH AARRQDAPYRLSTHALGPDLGQCCGGAVTLLSEVYTEVNIAQLTGQVISRAVAPGPEPLA HHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VSRILNHARAQGLAPAPQLIAGWMIEPVACATRPLWIWGAGHVGRALVEVLAPLPDYAIT HHHHHHHHHHCCCCCCHHHHHHHHHCHHHHCCCCEEEEECCHHHHHHHHHHHCCCCHHHH WVDVMRSKYPQEIPASVTALPAQEPGRLVPHAPTEAYHLILTYSHQLDLALCHRLLEHGF HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCC DFAGLIGSKTKWARFRARLAALGHRPEQIARLTCPIGMPELGKHPHAIAIGVAAELMALS CEEHHCCCCHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCCCEEHHHHHHHHHHHH QRLDLKKEHSA HHHCCHHHCCC >Mature Secondary Structure GFDVEALKAALEAHGRVIRVVVAEVKGSAPREVGAAMLVWDGGQSGTIGGGTLEFEAAD CCCHHHHHHHHHHCCCEEEEEEEHHCCCCCHHHCCEEEEEECCCCCCCCCCEEEEECHH AARRQDAPYRLSTHALGPDLGQCCGGAVTLLSEVYTEVNIAQLTGQVISRAVAPGPEPLA HHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VSRILNHARAQGLAPAPQLIAGWMIEPVACATRPLWIWGAGHVGRALVEVLAPLPDYAIT HHHHHHHHHHCCCCCCHHHHHHHHHCHHHHCCCCEEEEECCHHHHHHHHHHHCCCCHHHH WVDVMRSKYPQEIPASVTALPAQEPGRLVPHAPTEAYHLILTYSHQLDLALCHRLLEHGF HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCC DFAGLIGSKTKWARFRARLAALGHRPEQIARLTCPIGMPELGKHPHAIAIGVAAELMALS CEEHHCCCCHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCCCEEHHHHHHHHHHHH QRLDLKKEHSA HHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA