| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yufO [H]
Identifier: 99080337
GI number: 99080337
Start: 518906
End: 520426
Strand: Reverse
Name: yufO [H]
Synonym: TM1040_0496
Alternate gene names: 99080337
Gene position: 520426-518906 (Counterclockwise)
Preceding gene: 99080338
Following gene: 99080336
Centisome position: 16.26
GC content: 61.93
Gene sequence:
>1521_bases GTGAGCACGCCTCCCCTTCTGACCCTTGACGGCCTCACCAAGGCCTATCCCGGCGTCGTCGCCAATGACCAGGTCTCCTT CACCATCGGCACAGGCGAGGTGCATGCGCTTCTGGGTGAAAACGGTGCCGGAAAATCGACACTCGTGAAGATGATCTATG GCCTCGTGAAACCGGATTCCGGTCGCATGACCCTGCGCGGAGCGGCCTATGAGCCCTCCGAGCCGCGTCAAGCGCGCGCA GACGGCATTGCCATGGTATTTCAGCATTTTTCGCTATTTGATGCGCTGAATGTGGCAGAAAACATTGCCCTTGGCATGGA GAGCCCACCGGCGCTGCGTGATCTGGCGGCCCGGATCCGTGAGGTGTCCGAAGCCTATGGGCTGCCGCTCGATCCTTACC GCACGGTCGGAGACCTTTCGGCGGGCGAGCGTCAGCGGGTGGAGATCATTCGCTGCCTGCTGCAGGACCCAAAGCTTCTG ATCATGGACGAGCCGACATCAGTTCTGACACCGCAAGAGGTGGAGATCCTCTTTGAGACCCTGCGCAAGCTGAAGTCCGA AGGGACCTCGATCCTTTATATCTCGCACAAGCTCGAAGAAATCCGCGCGCTCTGCGACCACGCGACGATCCTGCGGCTCG GCAAGAATGTGGGCGAATGCGTGCCGCGCGAGACCTCTGCCCGCGAGATGGCAGAACTGATGGTGGGTAGCGCGCTCAAG ACGCCGGAACGCGGCGCGCGCAGATTTGGTGATGTGGCACTGGATATTTCTGGCCTTTCGGTGCCCGCGCCTTCGGCATT TGGCACCGCGTTGAAGAATGTGCACCTGACCGTGCGTCGGGGCGAGATCCTTGGCATTGGTGGTGTTGCAGGCAACGGGC AGGACGAGCTGCTATCAGTGATGTCGGGTGAGGTGACCACAGCCCGCGACGCGGTGAAATTCGACGGCCAGCCCATCGGG CGAATGGGCCCAACCGCGCGCCGCGCTCTTGGTGTCCTCAGTGCTCCAGAAGAGCGCCTGGGCCATGCCGCCGCGCCGGA TATGAGCCTGACCGAAAATGCGCTTTTGACCGGGTCGGTGCGCGAGGGGCTGGAGCAGAACGGTTTTTTGAAATGGGGGG CGACCAAGTCCTTTGCAGAGAAGATCATCAAGGCGTTTGATGTGCGCACACCGGGACCGGAGAACGCGGCGCGCTCGCTC TCTGGTGGGAATTTGCAGAAGTTCGTCATTGGCCGTGAGGTGCTGCAGCGCCCCGAGGTCCTGATCGTGAACCAGCCCAC ATGGGGCGTGGATGCGGCGGCGGCGGCGGCAATACGGCAGTCGCTACTTGATCTTGCCGCGCAGGGGACTGCGGTGATCT GCATCAGTCAGGATCTCGATGAGCTGATGGAAATCTCCGACAATTTCGCCGCCCTCAATGAGGGTCGTCTGTCCGCCCCG CGCCCCACGGGGGAGCTGACGGTGGATGAGATCGGCCTGATGATGGGCGGTGCACATGGCATGGAAGTGGCGCATGTGTA G
Upstream 100 bases:
>100_bases TGCCCGAACTGGGCAAACATCCACATGCCATCGCCATCGGCGTGGCGGCAGAACTCATGGCGCTCTCGCAGCGTTTGGAC TTGAAAAAGGAGCATAGCGC
Downstream 100 bases:
>100_bases CGCACTTGTCGCGGACTTTGGGGAAGTGACGCTCGGGGCGGAAGCCTCCGGCGGGGATATTTGGAAGAAGATGAAAAGAA CCGGAACACAAAGATCCGGC
Product: ABC transporter related
Products: ADP; phosphate; ribose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MSTPPLLTLDGLTKAYPGVVANDQVSFTIGTGEVHALLGENGAGKSTLVKMIYGLVKPDSGRMTLRGAAYEPSEPRQARA DGIAMVFQHFSLFDALNVAENIALGMESPPALRDLAARIREVSEAYGLPLDPYRTVGDLSAGERQRVEIIRCLLQDPKLL IMDEPTSVLTPQEVEILFETLRKLKSEGTSILYISHKLEEIRALCDHATILRLGKNVGECVPRETSAREMAELMVGSALK TPERGARRFGDVALDISGLSVPAPSAFGTALKNVHLTVRRGEILGIGGVAGNGQDELLSVMSGEVTTARDAVKFDGQPIG RMGPTARRALGVLSAPEERLGHAAAPDMSLTENALLTGSVREGLEQNGFLKWGATKSFAEKIIKAFDVRTPGPENAARSL SGGNLQKFVIGREVLQRPEVLIVNQPTWGVDAAAAAAIRQSLLDLAAQGTAVICISQDLDELMEISDNFAALNEGRLSAP RPTGELTVDEIGLMMGGAHGMEVAHV
Sequences:
>Translated_506_residues MSTPPLLTLDGLTKAYPGVVANDQVSFTIGTGEVHALLGENGAGKSTLVKMIYGLVKPDSGRMTLRGAAYEPSEPRQARA DGIAMVFQHFSLFDALNVAENIALGMESPPALRDLAARIREVSEAYGLPLDPYRTVGDLSAGERQRVEIIRCLLQDPKLL IMDEPTSVLTPQEVEILFETLRKLKSEGTSILYISHKLEEIRALCDHATILRLGKNVGECVPRETSAREMAELMVGSALK TPERGARRFGDVALDISGLSVPAPSAFGTALKNVHLTVRRGEILGIGGVAGNGQDELLSVMSGEVTTARDAVKFDGQPIG RMGPTARRALGVLSAPEERLGHAAAPDMSLTENALLTGSVREGLEQNGFLKWGATKSFAEKIIKAFDVRTPGPENAARSL SGGNLQKFVIGREVLQRPEVLIVNQPTWGVDAAAAAAIRQSLLDLAAQGTAVICISQDLDELMEISDNFAALNEGRLSAP RPTGELTVDEIGLMMGGAHGMEVAHV >Mature_505_residues STPPLLTLDGLTKAYPGVVANDQVSFTIGTGEVHALLGENGAGKSTLVKMIYGLVKPDSGRMTLRGAAYEPSEPRQARAD GIAMVFQHFSLFDALNVAENIALGMESPPALRDLAARIREVSEAYGLPLDPYRTVGDLSAGERQRVEIIRCLLQDPKLLI MDEPTSVLTPQEVEILFETLRKLKSEGTSILYISHKLEEIRALCDHATILRLGKNVGECVPRETSAREMAELMVGSALKT PERGARRFGDVALDISGLSVPAPSAFGTALKNVHLTVRRGEILGIGGVAGNGQDELLSVMSGEVTTARDAVKFDGQPIGR MGPTARRALGVLSAPEERLGHAAAPDMSLTENALLTGSVREGLEQNGFLKWGATKSFAEKIIKAFDVRTPGPENAARSLS GGNLQKFVIGREVLQRPEVLIVNQPTWGVDAAAAAAIRQSLLDLAAQGTAVICISQDLDELMEISDNFAALNEGRLSAPR PTGELTVDEIGLMMGGAHGMEVAHV
Specific function: Part Of The Binding-Protein-Dependent Transport System For Ribose. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG3845
COG function: function code R; ABC-type uncharacterized transport systems, ATPase components
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI171184400, Length=216, Percent_Identity=33.7962962962963, Blast_Score=96, Evalue=9e-20, Organism=Homo sapiens, GI31657092, Length=217, Percent_Identity=29.0322580645161, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI150417984, Length=226, Percent_Identity=30.0884955752212, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI153792144, Length=197, Percent_Identity=28.9340101522843, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI27262624, Length=208, Percent_Identity=26.4423076923077, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI27262626, Length=208, Percent_Identity=26.4423076923077, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI27881501, Length=211, Percent_Identity=28.9099526066351, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI30795238, Length=211, Percent_Identity=28.9099526066351, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI9961252, Length=188, Percent_Identity=33.5106382978723, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI4505771, Length=188, Percent_Identity=33.5106382978723, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI9665248, Length=224, Percent_Identity=31.25, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI42741659, Length=186, Percent_Identity=31.7204301075269, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI27436953, Length=199, Percent_Identity=27.6381909547739, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI255708477, Length=210, Percent_Identity=34.2857142857143, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI156105685, Length=252, Percent_Identity=27.7777777777778, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI148612844, Length=211, Percent_Identity=33.6492890995261, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI105990541, Length=223, Percent_Identity=28.6995515695067, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI9961250, Length=195, Percent_Identity=32.8205128205128, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI47078218, Length=215, Percent_Identity=27.906976744186, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI116734710, Length=193, Percent_Identity=30.5699481865285, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI45446740, Length=215, Percent_Identity=27.906976744186, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI21536378, Length=186, Percent_Identity=31.1827956989247, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI21536376, Length=219, Percent_Identity=27.8538812785388, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI27477115, Length=206, Percent_Identity=28.1553398058252, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI9955968, Length=216, Percent_Identity=29.1666666666667, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI73747915, Length=185, Percent_Identity=31.8918918918919, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI9955966, Length=216, Percent_Identity=29.1666666666667, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI45243524, Length=216, Percent_Identity=29.1666666666667, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI6005701, Length=204, Percent_Identity=27.9411764705882, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI73747917, Length=154, Percent_Identity=33.7662337662338, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1790190, Length=491, Percent_Identity=34.826883910387, Blast_Score=271, Evalue=9e-74, Organism=Escherichia coli, GI1788897, Length=482, Percent_Identity=34.8547717842324, Blast_Score=267, Evalue=1e-72, Organism=Escherichia coli, GI1788472, Length=502, Percent_Identity=33.2669322709163, Blast_Score=265, Evalue=7e-72, Organism=Escherichia coli, GI1790525, Length=491, Percent_Identity=31.7718940936864, Blast_Score=256, Evalue=2e-69, Organism=Escherichia coli, GI1787792, Length=485, Percent_Identity=35.0515463917526, Blast_Score=255, Evalue=5e-69, Organism=Escherichia coli, GI48995001, Length=496, Percent_Identity=34.0725806451613, Blast_Score=251, Evalue=9e-68, Organism=Escherichia coli, GI1788210, Length=484, Percent_Identity=32.8512396694215, Blast_Score=249, Evalue=2e-67, Organism=Escherichia coli, GI1789991, Length=500, Percent_Identity=32.8, Blast_Score=236, Evalue=2e-63, Organism=Escherichia coli, GI87081709, Length=275, Percent_Identity=30.5454545454545, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI87081791, Length=300, Percent_Identity=32, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI87081782, Length=556, Percent_Identity=23.7410071942446, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI48994943, Length=507, Percent_Identity=25.8382642998028, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI1787370, Length=228, Percent_Identity=32.4561403508772, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1786398, Length=310, Percent_Identity=29.6774193548387, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1789864, Length=237, Percent_Identity=28.6919831223629, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI1788506, Length=503, Percent_Identity=27.037773359841, Blast_Score=108, Evalue=8e-25, Organism=Escherichia coli, GI1789672, Length=240, Percent_Identity=30.4166666666667, Blast_Score=106, Evalue=4e-24, Organism=Escherichia coli, GI1790467, Length=211, Percent_Identity=32.7014218009479, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1786253, Length=198, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI87081834, Length=205, Percent_Identity=33.1707317073171, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1789593, Length=221, Percent_Identity=32.579185520362, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788225, Length=224, Percent_Identity=30.8035714285714, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1786319, Length=216, Percent_Identity=34.2592592592593, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1788761, Length=225, Percent_Identity=31.1111111111111, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI1789032, Length=213, Percent_Identity=34.2723004694836, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87082268, Length=214, Percent_Identity=29.9065420560748, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1787712, Length=230, Percent_Identity=28.2608695652174, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1786872, Length=216, Percent_Identity=31.4814814814815, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87082267, Length=240, Percent_Identity=28.3333333333333, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790544, Length=229, Percent_Identity=29.2576419213974, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1786345, Length=236, Percent_Identity=32.2033898305085, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1787759, Length=272, Percent_Identity=30.1470588235294, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1787029, Length=196, Percent_Identity=29.0816326530612, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1787089, Length=210, Percent_Identity=31.4285714285714, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788644, Length=243, Percent_Identity=31.2757201646091, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1786563, Length=230, Percent_Identity=30.8695652173913, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1787500, Length=207, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1789962, Length=233, Percent_Identity=29.6137339055794, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1786703, Length=191, Percent_Identity=35.0785340314136, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1789891, Length=236, Percent_Identity=32.2033898305085, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI145693107, Length=528, Percent_Identity=24.4318181818182, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1787105, Length=206, Percent_Identity=28.6407766990291, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1788450, Length=224, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1789873, Length=201, Percent_Identity=30.3482587064677, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790739, Length=223, Percent_Identity=26.0089686098655, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1787164, Length=249, Percent_Identity=27.710843373494, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1786803, Length=231, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI48994997, Length=225, Percent_Identity=31.5555555555556, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1789586, Length=195, Percent_Identity=29.7435897435897, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786698, Length=226, Percent_Identity=28.3185840707965, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1788053, Length=190, Percent_Identity=30, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1788165, Length=209, Percent_Identity=29.1866028708134, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1787547, Length=218, Percent_Identity=28.8990825688073, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1788540, Length=175, Percent_Identity=32, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1787143, Length=207, Percent_Identity=31.8840579710145, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI48994883, Length=218, Percent_Identity=27.9816513761468, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786981, Length=198, Percent_Identity=32.3232323232323, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787758, Length=218, Percent_Identity=27.5229357798165, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790534, Length=185, Percent_Identity=26.4864864864865, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115533592, Length=194, Percent_Identity=33.5051546391753, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17541710, Length=205, Percent_Identity=31.219512195122, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI115533608, Length=218, Percent_Identity=27.5229357798165, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI212646699, Length=194, Percent_Identity=30.9278350515464, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17543740, Length=197, Percent_Identity=34.010152284264, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17569143, Length=239, Percent_Identity=30.9623430962343, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI25146777, Length=221, Percent_Identity=29.8642533936652, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17565586, Length=211, Percent_Identity=26.5402843601896, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17565938, Length=205, Percent_Identity=32.6829268292683, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17569145, Length=206, Percent_Identity=33.0097087378641, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17510237, Length=215, Percent_Identity=25.5813953488372, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71983523, Length=205, Percent_Identity=29.7560975609756, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71983516, Length=205, Percent_Identity=29.7560975609756, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71983510, Length=205, Percent_Identity=29.7560975609756, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71992290, Length=185, Percent_Identity=31.3513513513514, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193208177, Length=189, Percent_Identity=30.1587301587302, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193209708, Length=210, Percent_Identity=32.3809523809524, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI193211017, Length=186, Percent_Identity=30.6451612903226, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI193211015, Length=186, Percent_Identity=30.6451612903226, Blast_Score=75, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17558664, Length=198, Percent_Identity=28.7878787878788, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71996809, Length=186, Percent_Identity=30.6451612903226, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115535101, Length=186, Percent_Identity=30.6451612903226, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115534520, Length=208, Percent_Identity=30.2884615384615, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17567265, Length=187, Percent_Identity=31.0160427807487, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17567269, Length=175, Percent_Identity=31.4285714285714, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193202349, Length=182, Percent_Identity=31.8681318681319, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71984940, Length=191, Percent_Identity=29.3193717277487, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17533971, Length=241, Percent_Identity=26.1410788381743, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322640, Length=224, Percent_Identity=28.125, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324985, Length=196, Percent_Identity=28.0612244897959, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323217, Length=204, Percent_Identity=28.921568627451, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI116007184, Length=221, Percent_Identity=29.8642533936652, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI221500365, Length=221, Percent_Identity=29.8642533936652, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI24643674, Length=214, Percent_Identity=28.9719626168224, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24666092, Length=211, Percent_Identity=27.4881516587678, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24641565, Length=230, Percent_Identity=30, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI17136662, Length=210, Percent_Identity=30.4761904761905, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI281363262, Length=200, Percent_Identity=31, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24653245, Length=200, Percent_Identity=31, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI19920532, Length=250, Percent_Identity=26.4, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI24580930, Length=250, Percent_Identity=26.4, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI116007328, Length=245, Percent_Identity=24.0816326530612, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574150, Length=245, Percent_Identity=24.0816326530612, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24659289, Length=208, Percent_Identity=28.8461538461538, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI85725262, Length=263, Percent_Identity=28.1368821292776, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI23397593, Length=203, Percent_Identity=31.0344827586207, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI221512771, Length=212, Percent_Identity=28.7735849056604, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI28571209, Length=218, Percent_Identity=25.2293577981651, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI24582014, Length=197, Percent_Identity=28.9340101522843, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI24582012, Length=197, Percent_Identity=28.9340101522843, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI85726357, Length=229, Percent_Identity=28.3842794759825, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI28574744, Length=196, Percent_Identity=28.0612244897959, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI21357907, Length=212, Percent_Identity=30.6603773584906, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 53953; Mature: 53821
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPPLLTLDGLTKAYPGVVANDQVSFTIGTGEVHALLGENGAGKSTLVKMIYGLVKPDS CCCCCEEEECCCHHHCCCCEECCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCC GRMTLRGAAYEPSEPRQARADGIAMVFQHFSLFDALNVAENIALGMESPPALRDLAARIR CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EVSEAYGLPLDPYRTVGDLSAGERQRVEIIRCLLQDPKLLIMDEPTSVLTPQEVEILFET HHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH LRKLKSEGTSILYISHKLEEIRALCDHATILRLGKNVGECVPRETSAREMAELMVGSALK HHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCC TPERGARRFGDVALDISGLSVPAPSAFGTALKNVHLTVRRGEILGIGGVAGNGQDELLSV CCHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCEEEEEECCCEEEECCCCCCCHHHHHHH MSGEVTTARDAVKFDGQPIGRMGPTARRALGVLSAPEERLGHAAAPDMSLTENALLTGSV HCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEECHH REGLEQNGFLKWGATKSFAEKIIKAFDVRTPGPENAARSLSGGNLQKFVIGREVLQRPEV HHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCE LIVNQPTWGVDAAAAAAIRQSLLDLAAQGTAVICISQDLDELMEISDNFAALNEGRLSAP EEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCHHHCCCCCCCCC RPTGELTVDEIGLMMGGAHGMEVAHV CCCCCEEHHHHHHHHCCCCCCEECCC >Mature Secondary Structure STPPLLTLDGLTKAYPGVVANDQVSFTIGTGEVHALLGENGAGKSTLVKMIYGLVKPDS CCCCEEEECCCHHHCCCCEECCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCC GRMTLRGAAYEPSEPRQARADGIAMVFQHFSLFDALNVAENIALGMESPPALRDLAARIR CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EVSEAYGLPLDPYRTVGDLSAGERQRVEIIRCLLQDPKLLIMDEPTSVLTPQEVEILFET HHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH LRKLKSEGTSILYISHKLEEIRALCDHATILRLGKNVGECVPRETSAREMAELMVGSALK HHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCC TPERGARRFGDVALDISGLSVPAPSAFGTALKNVHLTVRRGEILGIGGVAGNGQDELLSV CCHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCEEEEEECCCEEEECCCCCCCHHHHHHH MSGEVTTARDAVKFDGQPIGRMGPTARRALGVLSAPEERLGHAAAPDMSLTENALLTGSV HCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEECHH REGLEQNGFLKWGATKSFAEKIIKAFDVRTPGPENAARSLSGGNLQKFVIGREVLQRPEV HHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCE LIVNQPTWGVDAAAAAAIRQSLLDLAAQGTAVICISQDLDELMEISDNFAALNEGRLSAP EEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCHHHCCCCCCCCC RPTGELTVDEIGLMMGGAHGMEVAHV CCCCCEEHHHHHHHHCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ribose [Periplasm]; H2O [C]
Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]