Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080300

Identifier: 99080300

GI number: 99080300

Start: 476638

End: 477012

Strand: Direct

Name: 99080300

Synonym: TM1040_0459

Alternate gene names: NA

Gene position: 476638-477012 (Clockwise)

Preceding gene: 99080299

Following gene: 99080301

Centisome position: 14.89

GC content: 62.4

Gene sequence:

>375_bases
ATGACGCAGCCGGCGGGTGACATTCTGGTGCTTGAAGATGACATCACGCTTGGACAGCTCTTGTGCAATATGATCCGGAT
GTATCGGCTTGGGGATCCGTACCTTTCCCTGAGCGAAGTGGATGCCTGCCAGATGCTCCGGGAGCGGGACTTCAAGCTGT
GCTTTCTGGGGCTGCGGCTGCGTTCGGGGGTGTGCAAGCGCGCAGTGGCTGAGGCGGATGCGCGGATGGTTCCAACCCTG
CTGATGGTCGACTCCGAAGGGCTGGAGGAACTCGTGCCGCCGCCACGCCGCGGGTTGGTCCTCCAGATGCCAGCCCGTGA
GGAAGTGATCCGCGCCGCTGCGGTCACGCTTTTGGAGCAAAACGCAGCCGACTGA

Upstream 100 bases:

>100_bases
GCGGATTGTGCTCAATTCCATTGGAGGTGTCATATATGTGTTGTTGTGGGGAGAGCTTGCCAAGCGCGACACCCTTTGGG
TTTGCAAAGGACTGCACGAG

Downstream 100 bases:

>100_bases
GCGCGCGCCGGTATAAATTTTTGAACTTTAAGTGATTTTCACCGGTGCCGGTCCGTGCTAGCGTAATTCTGCGCGGCTGT
CAGAGTTCCTTCCACGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTQPAGDILVLEDDITLGQLLCNMIRMYRLGDPYLSLSEVDACQMLRERDFKLCFLGLRLRSGVCKRAVAEADARMVPTL
LMVDSEGLEELVPPPRRGLVLQMPAREEVIRAAAVTLLEQNAAD

Sequences:

>Translated_124_residues
MTQPAGDILVLEDDITLGQLLCNMIRMYRLGDPYLSLSEVDACQMLRERDFKLCFLGLRLRSGVCKRAVAEADARMVPTL
LMVDSEGLEELVPPPRRGLVLQMPAREEVIRAAAVTLLEQNAAD
>Mature_123_residues
TQPAGDILVLEDDITLGQLLCNMIRMYRLGDPYLSLSEVDACQMLRERDFKLCFLGLRLRSGVCKRAVAEADARMVPTLL
MVDSEGLEELVPPPRRGLVLQMPAREEVIRAAAVTLLEQNAAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13801; Mature: 13670

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPAGDILVLEDDITLGQLLCNMIRMYRLGDPYLSLSEVDACQMLRERDFKLCFLGLRL
CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
RSGVCKRAVAEADARMVPTLLMVDSEGLEELVPPPRRGLVLQMPAREEVIRAAAVTLLEQ
HHHHHHHHHHHHHHHHCCCCEEECCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHH
NAAD
CCCC
>Mature Secondary Structure 
TQPAGDILVLEDDITLGQLLCNMIRMYRLGDPYLSLSEVDACQMLRERDFKLCFLGLRL
CCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
RSGVCKRAVAEADARMVPTLLMVDSEGLEELVPPPRRGLVLQMPAREEVIRAAAVTLLEQ
HHHHHHHHHHHHHHHHCCCCEEECCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHH
NAAD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA