Click here to switch to the map view.

The map label for this gene is yiaN [C]

Identifier: 99080199

GI number: 99080199

Start: 363664

End: 364962

Strand: Direct

Name: yiaN [C]

Synonym: TM1040_0358

Alternate gene names: 99080199

Gene position: 363664-364962 (Clockwise)

Preceding gene: 99080198

Following gene: 99080200

Centisome position: 11.36

GC content: 59.35

Gene sequence:

>1299_bases
ATGAGCGAGATCTACACCACAGTCATTTTCCTCTTTGTGCTGTTTGCGCTTCTGGGCGGGTCGGTCTGGATCGGTCTCGC
GCTGATGGGCGTGGCCTGGGTCGGGATGGAGCTTTTCACCACCCGTCCGGCAGGGGATGCGATGATCACAACCATCTGGA
GCGGCGCGTCGAGCTGGACGCTTACGGCCCTGCCGCTCTTTATCTGGATGGGCGAAATCCTGTATCGGACCCGATTATCG
GAGGACATGTTCCGGGGACTTGCACCATGGATGCGGTTCCTGCCGGGGGGGCTTTTGCACACCAATATTGCCGGTTGCAC
AATCTTTGCTGCGGTCTCGGGGTCATCTGCGGCGACGCTCAACATGGTTGGCAAGATGTCGATCCCGGAACTGCGCGCGC
GCGGCTATCCCGAGTATATGATCATTGGCACACTTGCGGGCGCGGCAACTCTCGGCCTGATGATCCCGCCGTCGCTGACT
CTGATCGTCTATGGCGTGACCATAAATGAGAGCATCACCAAGCTGTTCATGGCGGGGGTATTTCCGGGTCTCGTGCTTGC
CGGGCTCTTTATGCTCTATATCGTGGGCTGGCACTTCTTTGGCCCGGGCGAACGCCCAAAGCCGGAACCCCGTCTGACAT
TCGGTGAGCGGATTGCCGAAAGCCGGTTCCTGCTTCCGCTCTTCGGGCTCGTCTTTGTGGTGATTGGCTCCATGTATATG
GGTTTTGCCACCGCAACCGAGGCGGCGGCCGTGGGGGTTCTGGGTGCTCTTGGGCTGTCCTTGATGCAAGGGAGTCTCAG
CTGGGGAACCTTTGTCGAGAGCCTGATGGGCGCGACGCGTACCTCGGCGATGATCGCCTTTATCCTGATGGGGGCTGCAT
TCCTGTCGCTGTCGATGGGCTTTACGGGTCTGCCGCGGGCGCTGGCAGGCATGATCGAGAGCTACAACCTGTCGCCCATT
GCGCTCATTGCGGTGCTGACGGTGTTCTACCTGATCCTCGGCATGTTCATGGATGGGCTGTCCTCGGTGGTTCTGACCAT
GGCCATTGTGGAGCCGATGATCCGGCAGGCCGGGATTGATGTGATCTGGTTTGGTATCTTCCTCGTGGTGGTCATCGAGA
CCGCACAAGTAACGCCACCGATCGGCTTCAATCTCTTTGTGCTGCAGGGCATGACCCGGCACGAGATCTCCTACATCGCC
AAAACCGCTGTGCCGATGGTCGCGCTGATGCTGTTGATGGTGGTGATCCTGGTGGTCTGGCCGGAGCTCGCAACCTGGTT
GCCAAACAACATCCGTTGA

Upstream 100 bases:

>100_bases
CGATGTCGATCGGCACCGTTCTGTTGGCGATCGCGCTTTGGGATTACCTATCTCGGATGCTGGTCACAGGCGCGCCACAG
ATCAAAGGGGAGGCTCTGGA

Downstream 100 bases:

>100_bases
TCCGTAAAAACGCCAAAGGCCCTTCTGCGTGAAGGGCCTTTGTGCGCAGCGCTGTGCTGTCTTGCGGGCGCTGATCTTTC
AAAATTTAGCGAAATCTTTG

Product: TRAP dicarboxylate transporter- DctM subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MSEIYTTVIFLFVLFALLGGSVWIGLALMGVAWVGMELFTTRPAGDAMITTIWSGASSWTLTALPLFIWMGEILYRTRLS
EDMFRGLAPWMRFLPGGLLHTNIAGCTIFAAVSGSSAATLNMVGKMSIPELRARGYPEYMIIGTLAGAATLGLMIPPSLT
LIVYGVTINESITKLFMAGVFPGLVLAGLFMLYIVGWHFFGPGERPKPEPRLTFGERIAESRFLLPLFGLVFVVIGSMYM
GFATATEAAAVGVLGALGLSLMQGSLSWGTFVESLMGATRTSAMIAFILMGAAFLSLSMGFTGLPRALAGMIESYNLSPI
ALIAVLTVFYLILGMFMDGLSSVVLTMAIVEPMIRQAGIDVIWFGIFLVVVIETAQVTPPIGFNLFVLQGMTRHEISYIA
KTAVPMVALMLLMVVILVVWPELATWLPNNIR

Sequences:

>Translated_432_residues
MSEIYTTVIFLFVLFALLGGSVWIGLALMGVAWVGMELFTTRPAGDAMITTIWSGASSWTLTALPLFIWMGEILYRTRLS
EDMFRGLAPWMRFLPGGLLHTNIAGCTIFAAVSGSSAATLNMVGKMSIPELRARGYPEYMIIGTLAGAATLGLMIPPSLT
LIVYGVTINESITKLFMAGVFPGLVLAGLFMLYIVGWHFFGPGERPKPEPRLTFGERIAESRFLLPLFGLVFVVIGSMYM
GFATATEAAAVGVLGALGLSLMQGSLSWGTFVESLMGATRTSAMIAFILMGAAFLSLSMGFTGLPRALAGMIESYNLSPI
ALIAVLTVFYLILGMFMDGLSSVVLTMAIVEPMIRQAGIDVIWFGIFLVVVIETAQVTPPIGFNLFVLQGMTRHEISYIA
KTAVPMVALMLLMVVILVVWPELATWLPNNIR
>Mature_431_residues
SEIYTTVIFLFVLFALLGGSVWIGLALMGVAWVGMELFTTRPAGDAMITTIWSGASSWTLTALPLFIWMGEILYRTRLSE
DMFRGLAPWMRFLPGGLLHTNIAGCTIFAAVSGSSAATLNMVGKMSIPELRARGYPEYMIIGTLAGAATLGLMIPPSLTL
IVYGVTINESITKLFMAGVFPGLVLAGLFMLYIVGWHFFGPGERPKPEPRLTFGERIAESRFLLPLFGLVFVVIGSMYMG
FATATEAAAVGVLGALGLSLMQGSLSWGTFVESLMGATRTSAMIAFILMGAAFLSLSMGFTGLPRALAGMIESYNLSPIA
LIAVLTVFYLILGMFMDGLSSVVLTMAIVEPMIRQAGIDVIWFGIFLVVVIETAQVTPPIGFNLFVLQGMTRHEISYIAK
TAVPMVALMLLMVVILVVWPELATWLPNNIR

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=379, Percent_Identity=29.023746701847, Blast_Score=124, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 46667; Mature: 46536

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIYTTVIFLFVLFALLGGSVWIGLALMGVAWVGMELFTTRPAGDAMITTIWSGASSWT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCH
LTALPLFIWMGEILYRTRLSEDMFRGLAPWMRFLPGGLLHTNIAGCTIFAAVSGSSAATL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHEEEEECCCCCCHH
NMVGKMSIPELRARGYPEYMIIGTLAGAATLGLMIPPSLTLIVYGVTINESITKLFMAGV
HHHCCCCCCHHHHCCCCCEEEEEEHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHH
FPGLVLAGLFMLYIVGWHFFGPGERPKPEPRLTFGERIAESRFLLPLFGLVFVVIGSMYM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH
GFATATEAAAVGVLGALGLSLMQGSLSWGTFVESLMGATRTSAMIAFILMGAAFLSLSMG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
FTGLPRALAGMIESYNLSPIALIAVLTVFYLILGMFMDGLSSVVLTMAIVEPMIRQAGID
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VIWFGIFLVVVIETAQVTPPIGFNLFVLQGMTRHEISYIAKTAVPMVALMLLMVVILVVW
HHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PELATWLPNNIR
HHHHHCCCCCCC
>Mature Secondary Structure 
SEIYTTVIFLFVLFALLGGSVWIGLALMGVAWVGMELFTTRPAGDAMITTIWSGASSWT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCH
LTALPLFIWMGEILYRTRLSEDMFRGLAPWMRFLPGGLLHTNIAGCTIFAAVSGSSAATL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHEEEEECCCCCCHH
NMVGKMSIPELRARGYPEYMIIGTLAGAATLGLMIPPSLTLIVYGVTINESITKLFMAGV
HHHCCCCCCHHHHCCCCCEEEEEEHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHH
FPGLVLAGLFMLYIVGWHFFGPGERPKPEPRLTFGERIAESRFLLPLFGLVFVVIGSMYM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH
GFATATEAAAVGVLGALGLSLMQGSLSWGTFVESLMGATRTSAMIAFILMGAAFLSLSMG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
FTGLPRALAGMIESYNLSPIALIAVLTVFYLILGMFMDGLSSVVLTMAIVEPMIRQAGID
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VIWFGIFLVVVIETAQVTPPIGFNLFVLQGMTRHEISYIAKTAVPMVALMLLMVVILVVW
HHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PELATWLPNNIR
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]