| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yfcG [H]
Identifier: 99080050
GI number: 99080050
Start: 226220
End: 226921
Strand: Direct
Name: yfcG [H]
Synonym: TM1040_0209
Alternate gene names: 99080050
Gene position: 226220-226921 (Clockwise)
Preceding gene: 99080049
Following gene: 99080051
Centisome position: 7.07
GC content: 57.41
Gene sequence:
>702_bases ATGTCGCAACCTGATATAATCCTCTACACCGCCAACACGATGAACGGGTGGAAGCCGCTAATCTTCTTGCACGAAGCGGA GATCGATTACGAATTGGTCAATGTCGACTTTTCCAAAAAAGAGCAGCATGCCCCCGATTATGTGAAGATGAATCCAAACG GAAAGATCCCGACGATCTGGGACCGCTCCGAAGGGCGCGCGATCTTTGAAAGCGGTGCAATCCTCTGGCATCTGGCCGAG AAATACGGGCGCTTTCTGTCTTCTGACCCGGTGGAGCGGTCTGAAACCTTGCAGTGGCTTTTCTTTCAGGTCGGCCATAT CGGTCCGATCATGGGGCAGGCGATGTTCTTTCAGCGCATCGCCAAACCCAATGGCGACGAGGTGCCCTATGCCATCAAAC GCTACGTGGATGAGAGCCGACGCCTGCTGGAGGTGCTCGACACAAGGCTTGCGGGGCGCGACTGGCTGGTTGGCACAGAG ATGTCGATCGCGGACATCGCAACCTACCCTTGGGCGCGCAGTCATTTTTGGGCCACGGTAGAGGTCGAAGGACTACCGCA CTTGCAGGCATGGTTCGACCGGCTTGATGCGATGCCAAAGGTACAAGAGGCCCTGCAACTGCCCGAGCCGCGTCCTTCGG CGTTTGGCAAGGGCGACATCGCGGCGGCGGCCTCCGCCAATGCTGCCCGTTTCAAGGAGTAA
Upstream 100 bases:
>100_bases CCAAGCTTTGCTGCCTTTGACGTCATGAAAAATCCCGAGATTGACGCCGACCTGATCCGGTTCGACGCACATCTCGACAG CCTATTTGCGGAGGCCGAAG
Downstream 100 bases:
>100_bases AGCGATGACCCTTCGTGTGGATATTGTGTCGGACGTGGTCTGTCCCTGGTGTGTGATCGGGTATCTCCAGCTGGCCAAGG CTGCGGCAGAAACCGGCACA
Product: glutathione S-transferase-like
Products: NA
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSQPDIILYTANTMNGWKPLIFLHEAEIDYELVNVDFSKKEQHAPDYVKMNPNGKIPTIWDRSEGRAIFESGAILWHLAE KYGRFLSSDPVERSETLQWLFFQVGHIGPIMGQAMFFQRIAKPNGDEVPYAIKRYVDESRRLLEVLDTRLAGRDWLVGTE MSIADIATYPWARSHFWATVEVEGLPHLQAWFDRLDAMPKVQEALQLPEPRPSAFGKGDIAAAASANAARFKE
Sequences:
>Translated_233_residues MSQPDIILYTANTMNGWKPLIFLHEAEIDYELVNVDFSKKEQHAPDYVKMNPNGKIPTIWDRSEGRAIFESGAILWHLAE KYGRFLSSDPVERSETLQWLFFQVGHIGPIMGQAMFFQRIAKPNGDEVPYAIKRYVDESRRLLEVLDTRLAGRDWLVGTE MSIADIATYPWARSHFWATVEVEGLPHLQAWFDRLDAMPKVQEALQLPEPRPSAFGKGDIAAAASANAARFKE >Mature_232_residues SQPDIILYTANTMNGWKPLIFLHEAEIDYELVNVDFSKKEQHAPDYVKMNPNGKIPTIWDRSEGRAIFESGAILWHLAEK YGRFLSSDPVERSETLQWLFFQVGHIGPIMGQAMFFQRIAKPNGDEVPYAIKRYVDESRRLLEVLDTRLAGRDWLVGTEM SIADIATYPWARSHFWATVEVEGLPHLQAWFDRLDAMPKVQEALQLPEPRPSAFGKGDIAAAASANAARFKE
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=205, Percent_Identity=44.8780487804878, Blast_Score=168, Evalue=3e-43, Organism=Escherichia coli, GI87082195, Length=214, Percent_Identity=34.5794392523364, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI87081789, Length=174, Percent_Identity=29.3103448275862, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI1787923, Length=189, Percent_Identity=28.042328042328, Blast_Score=61, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6324100, Length=233, Percent_Identity=30.0429184549356, Blast_Score=103, Evalue=2e-23, Organism=Drosophila melanogaster, GI20130115, Length=208, Percent_Identity=30.2884615384615, Blast_Score=80, Evalue=8e-16, Organism=Drosophila melanogaster, GI24654983, Length=187, Percent_Identity=31.5508021390374, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI19922532, Length=185, Percent_Identity=28.1081081081081, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI17933730, Length=179, Percent_Identity=27.9329608938547, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI17864592, Length=186, Percent_Identity=29.5698924731183, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI19922526, Length=225, Percent_Identity=28.4444444444444, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI28571670, Length=160, Percent_Identity=28.125, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI85725204, Length=171, Percent_Identity=29.2397660818713, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI17737923, Length=171, Percent_Identity=29.2397660818713, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI17864598, Length=157, Percent_Identity=31.2101910828025, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24654965, Length=192, Percent_Identity=27.0833333333333, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 26564; Mature: 26433
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPDIILYTANTMNGWKPLIFLHEAEIDYELVNVDFSKKEQHAPDYVKMNPNGKIPTIW CCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCCHHCCCCCEEEECCCCCCCEEE DRSEGRAIFESGAILWHLAEKYGRFLSSDPVERSETLQWLFFQVGHIGPIMGQAMFFQRI ECCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH AKPNGDEVPYAIKRYVDESRRLLEVLDTRLAGRDWLVGTEMSIADIATYPWARSHFWATV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCEEEEE EVEGLPHLQAWFDRLDAMPKVQEALQLPEPRPSAFGKGDIAAAASANAARFKE EECCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHCCC >Mature Secondary Structure SQPDIILYTANTMNGWKPLIFLHEAEIDYELVNVDFSKKEQHAPDYVKMNPNGKIPTIW CCCCEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCCHHCCCCCEEEECCCCCCCEEE DRSEGRAIFESGAILWHLAEKYGRFLSSDPVERSETLQWLFFQVGHIGPIMGQAMFFQRI ECCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH AKPNGDEVPYAIKRYVDESRRLLEVLDTRLAGRDWLVGTEMSIADIATYPWARSHFWATV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCEEEEE EVEGLPHLQAWFDRLDAMPKVQEALQLPEPRPSAFGKGDIAAAASANAARFKE EECCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]