Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is ywbO [H]

Identifier: 99080051

GI number: 99080051

Start: 226926

End: 227567

Strand: Direct

Name: ywbO [H]

Synonym: TM1040_0210

Alternate gene names: 99080051

Gene position: 226926-227567 (Clockwise)

Preceding gene: 99080050

Following gene: 99080052

Centisome position: 7.09

GC content: 60.9

Gene sequence:

>642_bases
ATGACCCTTCGTGTGGATATTGTGTCGGACGTGGTCTGTCCCTGGTGTGTGATCGGGTATCTCCAGCTGGCCAAGGCTGC
GGCAGAAACCGGCACAGACCTTGAGGTGCATTGGCATCCGTTCGAGCTGAACCCGCAGATGGCCCCGGAAGGCGAAAACT
TGCGGGAGCATCTGGCTGCCAAATATGGTACCACGCCGGAAGACTCGCGCGCGGCGCGGCTGAGGCTCACGGAGCTTGGC
GCGGCGCTGGGGTTTGCGTTCGACTATGCGGACGACATGCGGATGGTGAACACCTTCCGGGCCCACCAGCTGATTGACTG
GGCTGAGGATCAGGGCAAGGCGCATGAGATGAAGCGCGCGCTGTTTGCCGCGTTCTTCACCCGGCGCGAAGACCTCAATG
ATGTATCGGTGCTTGCAGATGTCGCAGAGAGCCTTGGCCTTGATCGTGTGGCTGCAGTTGCCATGCTCGAGGGCGGCGAG
AGGGCAGACGCCGTGCGCGAGAAACAGCAGTTCTGGACCTCCAAAGGCATAACGGGTGTTCCGGCAATGATCTTTGAACG
TCAGTATCTGGTGACCGGCGCGCAAGGCGAGGAGACCTACGCTCGTATCCTGACGGAACTGTCAGAGACGACCCCAGCGT
GA

Upstream 100 bases:

>100_bases
GAGGCCCTGCAACTGCCCGAGCCGCGTCCTTCGGCGTTTGGCAAGGGCGACATCGCGGCGGCGGCCTCCGCCAATGCTGC
CCGTTTCAAGGAGTAAAGCG

Downstream 100 bases:

>100_bases
GCGCGCGGGTCTGACAGTAAATATGCAGGGGTGGTTCTCGTGTTCCGGGGGCTGCCCCTTTAGGCGAAATAGATCGGGAC
AGACATGGGGTTTGCCAAGT

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTLRVDIVSDVVCPWCVIGYLQLAKAAAETGTDLEVHWHPFELNPQMAPEGENLREHLAAKYGTTPEDSRAARLRLTELG
AALGFAFDYADDMRMVNTFRAHQLIDWAEDQGKAHEMKRALFAAFFTRREDLNDVSVLADVAESLGLDRVAAVAMLEGGE
RADAVREKQQFWTSKGITGVPAMIFERQYLVTGAQGEETYARILTELSETTPA

Sequences:

>Translated_213_residues
MTLRVDIVSDVVCPWCVIGYLQLAKAAAETGTDLEVHWHPFELNPQMAPEGENLREHLAAKYGTTPEDSRAARLRLTELG
AALGFAFDYADDMRMVNTFRAHQLIDWAEDQGKAHEMKRALFAAFFTRREDLNDVSVLADVAESLGLDRVAAVAMLEGGE
RADAVREKQQFWTSKGITGVPAMIFERQYLVTGAQGEETYARILTELSETTPA
>Mature_212_residues
TLRVDIVSDVVCPWCVIGYLQLAKAAAETGTDLEVHWHPFELNPQMAPEGENLREHLAAKYGTTPEDSRAARLRLTELGA
ALGFAFDYADDMRMVNTFRAHQLIDWAEDQGKAHEMKRALFAAFFTRREDLNDVSVLADVAESLGLDRVAAVAMLEGGER
ADAVREKQQFWTSKGITGVPAMIFERQYLVTGAQGEETYARILTELSETTPA

Specific function: Unknown

COG id: COG2761

COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 23693; Mature: 23562

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRVDIVSDVVCPWCVIGYLQLAKAAAETGTDLEVHWHPFELNPQMAPEGENLREHLAA
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEECCCCCCCCCHHHHHHHHH
KYGTTPEDSRAARLRLTELGAALGFAFDYADDMRMVNTFRAHQLIDWAEDQGKAHEMKRA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LFAAFFTRREDLNDVSVLADVAESLGLDRVAAVAMLEGGERADAVREKQQFWTSKGITGV
HHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
PAMIFERQYLVTGAQGEETYARILTELSETTPA
HHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLRVDIVSDVVCPWCVIGYLQLAKAAAETGTDLEVHWHPFELNPQMAPEGENLREHLAA
EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEECCCCCCCCCHHHHHHHHH
KYGTTPEDSRAARLRLTELGAALGFAFDYADDMRMVNTFRAHQLIDWAEDQGKAHEMKRA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LFAAFFTRREDLNDVSVLADVAESLGLDRVAAVAMLEGGERADAVREKQQFWTSKGITGV
HHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
PAMIFERQYLVTGAQGEETYARILTELSETTPA
HHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]