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The map label for this gene is virG [H]

Identifier: 99079952

GI number: 99079952

Start: 116589

End: 117308

Strand: Reverse

Name: virG [H]

Synonym: TM1040_0111

Alternate gene names: 99079952

Gene position: 117308-116589 (Counterclockwise)

Preceding gene: 99079953

Following gene: 99079951

Centisome position: 3.66

GC content: 61.53

Gene sequence:

>720_bases
ATGCCTGATGCCAATGCCTCTCCGCTTGTCACCATTCTCGATGACGAGCCCGAAATCCGCCAGCTGCTGACCGAGACGCT
GGAGGATGCCGGGTATCGCACCCAGAGCTTTTCACGCGCCCGCGATTTCGAGGCCGCGCTCAAGCGGGTGACTCCCGATG
TCTGCCTTGTGGACCTGTCGCTGCCAGATACCGATGGTTTGGCGCTGGTACACCGGCTGGCACTTGAGCAGGGCGCAAGC
GTGATCATCATCTCGGGGCGTGCACAGGTCCAGGATCGAGTCACGGGGCTGGAACTGGGGGCGGACGACTACATCACCAA
ACCCTTTGACCCGGCAGAAGTGGTCGCGCGCATCCGCGTGCGCCTGCGTGACACCTCGCGCGGTGGGCAACCCGACACGG
GGGATCGGGCAGAGTTTTCCGGCTGGACCGCACATTTTGACCGCTACGCACTTGAGGATGAGAATGGCGAGGAGACCGCG
TTTTCGCATGCCGAAGGCGAAGTCCTGCGCCTCTTTCTGGAAAGCCCCAAGCGGCTGATCTCCCGCGCGCAGATGATGGA
ACGGCTCGGCGGCGGAGCCGGTGACAGCTTTGATCGTGCGATGGATGTACGTATTTCACGCCTGCGCACCAAGCTGCGCG
AAGATCCTAAAAACCCGCGCCTGATCAAGACGATCTACGGCGCTGGATATATCTTTCTAGGGGATGTGAGCTGGCGTTGA

Upstream 100 bases:

>100_bases
ACCGATCCGCTCTATCGCGCGGCCCTCACTCTGGCGCCACTCTTGCCAAAACCCTTTGAAAGCGCGCATCTGATGGCGCT
CCTGCAACAAAAGGCCGACC

Downstream 100 bases:

>100_bases
ACTCTGCTGCACGAGACCAAACCCTCGGCGGACAACAGGCGCGTTTTGGGCTCTTGCAGCGGTGATTCGGCTGGCGTAGA
AAAACCGGATGGCGACCTGT

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MPDANASPLVTILDDEPEIRQLLTETLEDAGYRTQSFSRARDFEAALKRVTPDVCLVDLSLPDTDGLALVHRLALEQGAS
VIIISGRAQVQDRVTGLELGADDYITKPFDPAEVVARIRVRLRDTSRGGQPDTGDRAEFSGWTAHFDRYALEDENGEETA
FSHAEGEVLRLFLESPKRLISRAQMMERLGGGAGDSFDRAMDVRISRLRTKLREDPKNPRLIKTIYGAGYIFLGDVSWR

Sequences:

>Translated_239_residues
MPDANASPLVTILDDEPEIRQLLTETLEDAGYRTQSFSRARDFEAALKRVTPDVCLVDLSLPDTDGLALVHRLALEQGAS
VIIISGRAQVQDRVTGLELGADDYITKPFDPAEVVARIRVRLRDTSRGGQPDTGDRAEFSGWTAHFDRYALEDENGEETA
FSHAEGEVLRLFLESPKRLISRAQMMERLGGGAGDSFDRAMDVRISRLRTKLREDPKNPRLIKTIYGAGYIFLGDVSWR
>Mature_238_residues
PDANASPLVTILDDEPEIRQLLTETLEDAGYRTQSFSRARDFEAALKRVTPDVCLVDLSLPDTDGLALVHRLALEQGASV
IIISGRAQVQDRVTGLELGADDYITKPFDPAEVVARIRVRLRDTSRGGQPDTGDRAEFSGWTAHFDRYALEDENGEETAF
SHAEGEVLRLFLESPKRLISRAQMMERLGGGAGDSFDRAMDVRISRLRTKLREDPKNPRLIKTIYGAGYIFLGDVSWR

Specific function: VirG is required for the positive regulation of at least two vir loci encoded by the Ti plasmid of A.tumefaciens [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=232, Percent_Identity=33.1896551724138, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=31.1965811965812, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787229, Length=232, Percent_Identity=33.1896551724138, Blast_Score=122, Evalue=1e-29,
Organism=Escherichia coli, GI1790860, Length=232, Percent_Identity=33.1896551724138, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1788394, Length=246, Percent_Identity=29.6747967479675, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=32.6086956521739, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1786911, Length=227, Percent_Identity=31.7180616740088, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1787375, Length=225, Percent_Identity=29.3333333333333, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=31.5789473684211, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=28.3783783783784, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=31.0344827586207, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=26.9565217391304, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=29.2035398230088, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790552, Length=233, Percent_Identity=25.7510729613734, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790299, Length=124, Percent_Identity=33.0645161290323, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=33.0188679245283, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26649; Mature: 26518

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDANASPLVTILDDEPEIRQLLTETLEDAGYRTQSFSRARDFEAALKRVTPDVCLVDLS
CCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
LPDTDGLALVHRLALEQGASVIIISGRAQVQDRVTGLELGADDYITKPFDPAEVVARIRV
CCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHH
RLRDTSRGGQPDTGDRAEFSGWTAHFDRYALEDENGEETAFSHAEGEVLRLFLESPKRLI
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHH
SRAQMMERLGGGAGDSFDRAMDVRISRLRTKLREDPKNPRLIKTIYGAGYIFLGDVSWR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCEEEEECCCCC
>Mature Secondary Structure 
PDANASPLVTILDDEPEIRQLLTETLEDAGYRTQSFSRARDFEAALKRVTPDVCLVDLS
CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
LPDTDGLALVHRLALEQGASVIIISGRAQVQDRVTGLELGADDYITKPFDPAEVVARIRV
CCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHH
RLRDTSRGGQPDTGDRAEFSGWTAHFDRYALEDENGEETAFSHAEGEVLRLFLESPKRLI
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHH
SRAQMMERLGGGAGDSFDRAMDVRISRLRTKLREDPKNPRLIKTIYGAGYIFLGDVSWR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3448462; 2194232; 7601840; 11743193; 11743194 [H]