| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is zraS [H]
Identifier: 99079953
GI number: 99079953
Start: 117301
End: 119205
Strand: Reverse
Name: zraS [H]
Synonym: TM1040_0112
Alternate gene names: 99079953
Gene position: 119205-117301 (Counterclockwise)
Preceding gene: 99079957
Following gene: 99079952
Centisome position: 3.72
GC content: 62.62
Gene sequence:
>1905_bases ATGAAACAGAACACGGCACAACGCATGGCGATGATCGACGCAGGCCTGAACCTCATTGCGCAGGCCATGTCGATCTACGA CCGCAACCTGCGCCTTGCGGCCTGCAACCATCGCTTTCAGGAAATGTTTTCACTGCCGCCCGAATTGGTGCAAGAGGGCG CGACGTTCGAAGACACCATCCGCTTTATCGCGGTACAGGGCGACTATGGCCCCATTGATGACATCGATTCGTTTGTGCAG CTGCGGGTGGAACAGGCCCGCGCCTTTGTGCCCCATTACGTCGAGCGCCAGCGTGCCAATGGCCATGTGATTTCGATCGA GGGCGCGCCTCTTCCGGAGGGGGGCTGGGTCACGGTCTACACCGACATCACCCGCACCAAGCGGGTTGAAGAATTGCTCC GCGCCCGCTCCGAGGAGCTCTCGGATCAGGTGATGAGCTACACAGAAGAGCTCTCGGCCACCAACCGAAAGCTTGCAGCC ACGATCACCACACTTGAAGAGACCCAGCGCCAGCTGACGCAGACCGAGGCCCGCACCCGGCTCACGACCGAAATGATGCC CGCCCATATCGCGCATGTGGATGCGGACGGGCATTATACCTTTACCAACGGACGTTTGAGCAAAGTGTTTCCCGGCCGCC CCTCCGACATTCTCGGCCAGCATATTGCCGAGGCGCTCGGGTCCGCCGCCTATGCCCGCATCGCACCGCACCTCTCGGCG GCCTACCAGGGTGAAAGCCCGGTGTTTGAGTTCACCGAGGATCAGGACAGCCGCCGCCTGCGCGTGGCGTTTACGCCCGA CAACGAAGGCGGGGTGTTCATCCTGTCGATGGATGTGACCGAGGAAACCCAGACCCGCGTGGCCCTGCAACAGGCCCGCA AGCGCGAGATCGCCGCGCAGATGACCAGCGGGCTTGCGCATGATTTCTCCAACCTTCTGACCATCATCCTCGGAATGCAG ACACGCCTTGATCGGATGACCCTGCCCGAAGGCGCGGGCGAGCTCGTGGAGGCCACCCTGTCAGCCGCGCGGCGCGGCGG GCGGCTCTTGGATCGGATGGCTGAAATGACCAGTCACCGTGGCCTGCGCCCGCAAGCCACCGACCTGCACGCGCTCTTGG ACGAGATGAAGATCCTCGCCACGCCGTCACTACCACAGGGCATCGGTCTCAGCGTGCTGGACAACACAAGCGAGGGGCCG GTCCTTTTGGATCCGGGGCGGCTGCAGGACGCGCTTTTGAACCTGATTTTGAATGCGCGCGACGCCTGCGGCACCAGCGG CCAGATCACGGTTGCCGCGCATCTGGTCGGGCAGACCTGGATCGAATTCTCCGTAAGCGACACAGGCCCCGGCTTTTCAG TGCAAGCGCTTGAGAATGCGCTCAACCCGTTTTTCACCACCAAGGGGCAAGAGGGCTCGGGGCTGGGGTTGTCGATGGTC TATGACATGGTGAAATCCGCCGGGGGGGACATCCGCATCAGCAACACCGTCTCCGGCGCGATGGTGACGCTGCGCCTGCC CTACCGCCCAGCGCCGATGGCGGCCGGCGGCATTGCCCTTCTGGTCGAAGACAGCGACACGCTTCGGGCGACCTATCGTC AGGTGCTGATGGATCTTGGATACTCCGTCATCGAGGCCACCAGCGTTGATGAGGCCGTTGCGCTTTTGGCGGATGTCGAA GGGATTGCACTGATCCTGTCGGACATCAAACTGGAAGGCGATGCCACCGGCGTCGATCTCTGCACCCGGCTGGGGCCGGA TGCGCCACCCGTGGTACTGATGACCTCGTTGCCGCATACCGATCCGCTCTATCGCGCGGCCCTCACTCTGGCGCCACTCT TGCCAAAACCCTTTGAAAGCGCGCATCTGATGGCGCTCCTGCAACAAAAGGCCGACCATGCCTGA
Upstream 100 bases:
>100_bases TGATCGATCTGCAATTCCTGTCGGACCACCCTCAGGGGCGCAATCACAAGCCACTTTGCCAATGCGCCACAAGCTGTTAG CCAAGAGGCGGGGAGCACGT
Downstream 100 bases:
>100_bases TGCCAATGCCTCTCCGCTTGTCACCATTCTCGATGACGAGCCCGAAATCCGCCAGCTGCTGACCGAGACGCTGGAGGATG CCGGGTATCGCACCCAGAGC
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MKQNTAQRMAMIDAGLNLIAQAMSIYDRNLRLAACNHRFQEMFSLPPELVQEGATFEDTIRFIAVQGDYGPIDDIDSFVQ LRVEQARAFVPHYVERQRANGHVISIEGAPLPEGGWVTVYTDITRTKRVEELLRARSEELSDQVMSYTEELSATNRKLAA TITTLEETQRQLTQTEARTRLTTEMMPAHIAHVDADGHYTFTNGRLSKVFPGRPSDILGQHIAEALGSAAYARIAPHLSA AYQGESPVFEFTEDQDSRRLRVAFTPDNEGGVFILSMDVTEETQTRVALQQARKREIAAQMTSGLAHDFSNLLTIILGMQ TRLDRMTLPEGAGELVEATLSAARRGGRLLDRMAEMTSHRGLRPQATDLHALLDEMKILATPSLPQGIGLSVLDNTSEGP VLLDPGRLQDALLNLILNARDACGTSGQITVAAHLVGQTWIEFSVSDTGPGFSVQALENALNPFFTTKGQEGSGLGLSMV YDMVKSAGGDIRISNTVSGAMVTLRLPYRPAPMAAGGIALLVEDSDTLRATYRQVLMDLGYSVIEATSVDEAVALLADVE GIALILSDIKLEGDATGVDLCTRLGPDAPPVVLMTSLPHTDPLYRAALTLAPLLPKPFESAHLMALLQQKADHA
Sequences:
>Translated_634_residues MKQNTAQRMAMIDAGLNLIAQAMSIYDRNLRLAACNHRFQEMFSLPPELVQEGATFEDTIRFIAVQGDYGPIDDIDSFVQ LRVEQARAFVPHYVERQRANGHVISIEGAPLPEGGWVTVYTDITRTKRVEELLRARSEELSDQVMSYTEELSATNRKLAA TITTLEETQRQLTQTEARTRLTTEMMPAHIAHVDADGHYTFTNGRLSKVFPGRPSDILGQHIAEALGSAAYARIAPHLSA AYQGESPVFEFTEDQDSRRLRVAFTPDNEGGVFILSMDVTEETQTRVALQQARKREIAAQMTSGLAHDFSNLLTIILGMQ TRLDRMTLPEGAGELVEATLSAARRGGRLLDRMAEMTSHRGLRPQATDLHALLDEMKILATPSLPQGIGLSVLDNTSEGP VLLDPGRLQDALLNLILNARDACGTSGQITVAAHLVGQTWIEFSVSDTGPGFSVQALENALNPFFTTKGQEGSGLGLSMV YDMVKSAGGDIRISNTVSGAMVTLRLPYRPAPMAAGGIALLVEDSDTLRATYRQVLMDLGYSVIEATSVDEAVALLADVE GIALILSDIKLEGDATGVDLCTRLGPDAPPVVLMTSLPHTDPLYRAALTLAPLLPKPFESAHLMALLQQKADHA >Mature_634_residues MKQNTAQRMAMIDAGLNLIAQAMSIYDRNLRLAACNHRFQEMFSLPPELVQEGATFEDTIRFIAVQGDYGPIDDIDSFVQ LRVEQARAFVPHYVERQRANGHVISIEGAPLPEGGWVTVYTDITRTKRVEELLRARSEELSDQVMSYTEELSATNRKLAA TITTLEETQRQLTQTEARTRLTTEMMPAHIAHVDADGHYTFTNGRLSKVFPGRPSDILGQHIAEALGSAAYARIAPHLSA AYQGESPVFEFTEDQDSRRLRVAFTPDNEGGVFILSMDVTEETQTRVALQQARKREIAAQMTSGLAHDFSNLLTIILGMQ TRLDRMTLPEGAGELVEATLSAARRGGRLLDRMAEMTSHRGLRPQATDLHALLDEMKILATPSLPQGIGLSVLDNTSEGP VLLDPGRLQDALLNLILNARDACGTSGQITVAAHLVGQTWIEFSVSDTGPGFSVQALENALNPFFTTKGQEGSGLGLSMV YDMVKSAGGDIRISNTVSGAMVTLRLPYRPAPMAAGGIALLVEDSDTLRATYRQVLMDLGYSVIEATSVDEAVALLADVE GIALILSDIKLEGDATGVDLCTRLGPDAPPVVLMTSLPHTDPLYRAALTLAPLLPKPFESAHLMALLQQKADHA
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=220, Percent_Identity=32.7272727272727, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1788549, Length=243, Percent_Identity=27.9835390946502, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI48994928, Length=532, Percent_Identity=25.187969924812, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI87081816, Length=236, Percent_Identity=26.6949152542373, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 68953; Mature: 68953
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNTAQRMAMIDAGLNLIAQAMSIYDRNLRLAACNHRFQEMFSLPPELVQEGATFEDTI CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCHHHHHCCCCHHHEE RFIAVQGDYGPIDDIDSFVQLRVEQARAFVPHYVERQRANGHVISIEGAPLPEGGWVTVY EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEE TDITRTKRVEELLRARSEELSDQVMSYTEELSATNRKLAATITTLEETQRQLTQTEARTR ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LTTEMMPAHIAHVDADGHYTFTNGRLSKVFPGRPSDILGQHIAEALGSAAYARIAPHLSA HHHHHCCHHHEEEECCCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AYQGESPVFEFTEDQDSRRLRVAFTPDNEGGVFILSMDVTEETQTRVALQQARKREIAAQ HCCCCCCCEECCCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH MTSGLAHDFSNLLTIILGMQTRLDRMTLPEGAGELVEATLSAARRGGRLLDRMAEMTSHR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCC GLRPQATDLHALLDEMKILATPSLPQGIGLSVLDNTSEGPVLLDPGRLQDALLNLILNAR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEECCHHHHHHHHHHHHHCH DACGTSGQITVAAHLVGQTWIEFSVSDTGPGFSVQALENALNPFFTTKGQEGSGLGLSMV HCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEHHHHHHHCCCCEECCCCCCCCCHHHHH YDMVKSAGGDIRISNTVSGAMVTLRLPYRPAPMAAGGIALLVEDSDTLRATYRQVLMDLG HHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCC YSVIEATSVDEAVALLADVEGIALILSDIKLEGDATGVDLCTRLGPDAPPVVLMTSLPHT HHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCEEEEECCCCC DPLYRAALTLAPLLPKPFESAHLMALLQQKADHA CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKQNTAQRMAMIDAGLNLIAQAMSIYDRNLRLAACNHRFQEMFSLPPELVQEGATFEDTI CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCHHHHHCCCCHHHEE RFIAVQGDYGPIDDIDSFVQLRVEQARAFVPHYVERQRANGHVISIEGAPLPEGGWVTVY EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEE TDITRTKRVEELLRARSEELSDQVMSYTEELSATNRKLAATITTLEETQRQLTQTEARTR ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LTTEMMPAHIAHVDADGHYTFTNGRLSKVFPGRPSDILGQHIAEALGSAAYARIAPHLSA HHHHHCCHHHEEEECCCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AYQGESPVFEFTEDQDSRRLRVAFTPDNEGGVFILSMDVTEETQTRVALQQARKREIAAQ HCCCCCCCEECCCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH MTSGLAHDFSNLLTIILGMQTRLDRMTLPEGAGELVEATLSAARRGGRLLDRMAEMTSHR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCC GLRPQATDLHALLDEMKILATPSLPQGIGLSVLDNTSEGPVLLDPGRLQDALLNLILNAR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEECCHHHHHHHHHHHHHCH DACGTSGQITVAAHLVGQTWIEFSVSDTGPGFSVQALENALNPFFTTKGQEGSGLGLSMV HCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEHHHHHHHCCCCEECCCCCCCCCHHHHH YDMVKSAGGDIRISNTVSGAMVTLRLPYRPAPMAAGGIALLVEDSDTLRATYRQVLMDLG HHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCC YSVIEATSVDEAVALLADVEGIALILSDIKLEGDATGVDLCTRLGPDAPPVVLMTSLPHT HHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCEEEEECCCCC DPLYRAALTLAPLLPKPFESAHLMALLQQKADHA CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11243806 [H]