| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is pqqL [C]
Identifier: 94986323
GI number: 94986323
Start: 2344401
End: 2345627
Strand: Reverse
Name: pqqL [C]
Synonym: Dgeo_2224
Alternate gene names: 94986323
Gene position: 2345627-2344401 (Counterclockwise)
Preceding gene: 94986324
Following gene: 94986322
Centisome position: 95.07
GC content: 69.36
Gene sequence:
>1227_bases ATGACCGTCCGCTGCACCCTCCCGAATGGCCTGACTCTCCTCCTTGAACCCGATGCAGAGGCACAGACTGTGGCTGCCGG CTATTTTGTGGCGACCGGGTCACGCGACGAGCGCCCGGAGGAGCTGGGGGCCTCACACTTCCTCGAACACCTGATGTTCA AGGGGTCGGAGCGGCTGGACGCCGCCACCCTGAATGCGCGCCTCGACGAGCTGGGCGGAAACGCGAACGCCTTTACCAGC GAGGAGGCCACGGTCTACCACGCCGCAACCCTGCCCGAGCAGGCGCCCGAGCTGCTGGAGACGTTGACTGAACTGCTGCG GCCCGCCCTGCGGCCGGCAGACATCGAACCCGAGCGTGGTGTGATTCTCGAAGAGATCGCGATGTACGCCGAGCAGCCCG CCGTGCGGGTGGTGGATGAGCTGCGCGCTACCTACTGGGGCGAGCATCCCCTGGGGCACGCGGTGCTGGGCACGCCGCAG ACCGTGGGATCCCTCTCCCGCGAGGCGCTGGCGCGCAACCATCGCGAGCGCTACGGCGCAGACCGGGTGACCCTTGCGGT GGTTGGGGCCTTTGATGCGGACCAGGTGCTGACCTGGGCCCAGGAGGAGCTGAAGAGCTGGCCCGCCGGAACCCCGCAGG CCGCCAGCATCTCCCCCCGCCCCCCCGCCCCTGGCACTGTCCGCACCCTGCACGACGACCGCCTGATGCGGGTGCAGGTC GCGCTGGCGCTGCCCGGCCTCCCCACCACCCATCCACTGCGCGAGGCCGCTGTGGTGCTGGCCGAACTGCTTGGCGGTGA GAACGGCCTGCTGTACTGGGCGCTGCTCGACACCGGCTTGGCTGACAGCGCTGATCTGGCGCACCTGGACTATCGCGACG CGGGCACCTTCGAGGGTGGCTTTTCCTGTGATCCCGAGCGCGCACAGACGGTGTTGGATACCTACCGCGCCGTGCTGCAA AGGGCGCCCGACACCCTGACCGAGGCCGCCGTTCGCCGCGCTGCGCGCAAGCTGGCGGTGAGCAGCCTGTTGCGTGCGGA GACGCCACAGGGCCGTTTGTTTGCGCTGGGGATGGAGTACGTGGCCCTGGGGCAGGCACTCTCCACCGCTGAGCTCGCAG AACGCTTTGCTCGGGTGACGCCGGGGGACGTGCGAGCCGTGCTGGAGCTTTGCCCACTGACCACGCCGACGGTGGTGGCG CTGGGGCCGATCAAGGCCATGCGCTGA
Upstream 100 bases:
>100_bases TTGCGGCCCTCACCCTGGAGCGGGTGAACGCTTTCCTGGCTGAGTATGACCCTGTCGCACAGGCGACCATCGTGACGCTT GGCCCGGCGGAGGTACAGGC
Downstream 100 bases:
>100_bases TCCAATCCTGGGCTTGCCCCGATATGTGCCGGCCTTTGGGCCAGATCGACTCCGCCAACGTGCTGTGGGAAAAATGACTT GAGAGAATGATGGGAGATGC
Product: peptidase M16-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MTVRCTLPNGLTLLLEPDAEAQTVAAGYFVATGSRDERPEELGASHFLEHLMFKGSERLDAATLNARLDELGGNANAFTS EEATVYHAATLPEQAPELLETLTELLRPALRPADIEPERGVILEEIAMYAEQPAVRVVDELRATYWGEHPLGHAVLGTPQ TVGSLSREALARNHRERYGADRVTLAVVGAFDADQVLTWAQEELKSWPAGTPQAASISPRPPAPGTVRTLHDDRLMRVQV ALALPGLPTTHPLREAAVVLAELLGGENGLLYWALLDTGLADSADLAHLDYRDAGTFEGGFSCDPERAQTVLDTYRAVLQ RAPDTLTEAAVRRAARKLAVSSLLRAETPQGRLFALGMEYVALGQALSTAELAERFARVTPGDVRAVLELCPLTTPTVVA LGPIKAMR
Sequences:
>Translated_408_residues MTVRCTLPNGLTLLLEPDAEAQTVAAGYFVATGSRDERPEELGASHFLEHLMFKGSERLDAATLNARLDELGGNANAFTS EEATVYHAATLPEQAPELLETLTELLRPALRPADIEPERGVILEEIAMYAEQPAVRVVDELRATYWGEHPLGHAVLGTPQ TVGSLSREALARNHRERYGADRVTLAVVGAFDADQVLTWAQEELKSWPAGTPQAASISPRPPAPGTVRTLHDDRLMRVQV ALALPGLPTTHPLREAAVVLAELLGGENGLLYWALLDTGLADSADLAHLDYRDAGTFEGGFSCDPERAQTVLDTYRAVLQ RAPDTLTEAAVRRAARKLAVSSLLRAETPQGRLFALGMEYVALGQALSTAELAERFARVTPGDVRAVLELCPLTTPTVVA LGPIKAMR >Mature_407_residues TVRCTLPNGLTLLLEPDAEAQTVAAGYFVATGSRDERPEELGASHFLEHLMFKGSERLDAATLNARLDELGGNANAFTSE EATVYHAATLPEQAPELLETLTELLRPALRPADIEPERGVILEEIAMYAEQPAVRVVDELRATYWGEHPLGHAVLGTPQT VGSLSREALARNHRERYGADRVTLAVVGAFDADQVLTWAQEELKSWPAGTPQAASISPRPPAPGTVRTLHDDRLMRVQVA LALPGLPTTHPLREAAVVLAELLGGENGLLYWALLDTGLADSADLAHLDYRDAGTFEGGFSCDPERAQTVLDTYRAVLQR APDTLTEAAVRRAARKLAVSSLLRAETPQGRLFALGMEYVALGQALSTAELAERFARVTPGDVRAVLELCPLTTPTVVAL GPIKAMR
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI94538354, Length=419, Percent_Identity=26.9689737470167, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI46593007, Length=422, Percent_Identity=28.1990521327014, Blast_Score=120, Evalue=3e-27, Organism=Escherichia coli, GI1787770, Length=243, Percent_Identity=25.1028806584362, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71999683, Length=400, Percent_Identity=27.75, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17553678, Length=412, Percent_Identity=22.8155339805825, Blast_Score=86, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6323192, Length=402, Percent_Identity=28.8557213930348, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6321813, Length=416, Percent_Identity=23.0769230769231, Blast_Score=88, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6319426, Length=403, Percent_Identity=23.5732009925558, Blast_Score=74, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6323421, Length=209, Percent_Identity=26.7942583732057, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI21357875, Length=413, Percent_Identity=29.2978208232446, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI24646943, Length=413, Percent_Identity=29.2978208232446, Blast_Score=149, Evalue=5e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 44011; Mature: 43880
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRCTLPNGLTLLLEPDAEAQTVAAGYFVATGSRDERPEELGASHFLEHLMFKGSERLD CEEEEECCCCCEEEECCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHH AATLNARLDELGGNANAFTSEEATVYHAATLPEQAPELLETLTELLRPALRPADIEPERG HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC VILEEIAMYAEQPAVRVVDELRATYWGEHPLGHAVLGTPQTVGSLSREALARNHRERYGA HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCC DRVTLAVVGAFDADQVLTWAQEELKSWPAGTPQAASISPRPPAPGTVRTLHDDRLMRVQV CEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEE ALALPGLPTTHPLREAAVVLAELLGGENGLLYWALLDTGLADSADLAHLDYRDAGTFEGG EEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC FSCDPERAQTVLDTYRAVLQRAPDTLTEAAVRRAARKLAVSSLLRAETPQGRLFALGMEY CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHH VALGQALSTAELAERFARVTPGDVRAVLELCPLTTPTVVALGPIKAMR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCHHHCC >Mature Secondary Structure TVRCTLPNGLTLLLEPDAEAQTVAAGYFVATGSRDERPEELGASHFLEHLMFKGSERLD EEEEECCCCCEEEECCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHH AATLNARLDELGGNANAFTSEEATVYHAATLPEQAPELLETLTELLRPALRPADIEPERG HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC VILEEIAMYAEQPAVRVVDELRATYWGEHPLGHAVLGTPQTVGSLSREALARNHRERYGA HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCC DRVTLAVVGAFDADQVLTWAQEELKSWPAGTPQAASISPRPPAPGTVRTLHDDRLMRVQV CEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEE ALALPGLPTTHPLREAAVVLAELLGGENGLLYWALLDTGLADSADLAHLDYRDAGTFEGG EEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC FSCDPERAQTVLDTYRAVLQRAPDTLTEAAVRRAARKLAVSSLLRAETPQGRLFALGMEY CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHH VALGQALSTAELAERFARVTPGDVRAVLELCPLTTPTVVALGPIKAMR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]