Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

Click here to switch to the map view.

The map label for this gene is 94986322

Identifier: 94986322

GI number: 94986322

Start: 2343146

End: 2344177

Strand: Reverse

Name: 94986322

Synonym: Dgeo_2223

Alternate gene names: NA

Gene position: 2344177-2343146 (Counterclockwise)

Preceding gene: 94986323

Following gene: 94986321

Centisome position: 95.01

GC content: 64.05

Gene sequence:

>1032_bases
ATGAAACCACACCGTACGCTGTCTTTCGCTCTCCTCTCGGGTGCCCTGCTGCTGACGGCCTGTGGCACGGGCAGCACACC
ACCGGACACCATGGCACCCAAGATCACCCTCAGCGCCTCGCCCAAGGCACTCACCAAGCCTGGGAGCGTGAAGCTGACGG
CGGACGCCAGCGACAATGTGGGCGTCAGCAAGGTCGAGTTCTACCGGGGTGACAGCAAGATCGGTGAGGCGACGGCGGCG
CCCTACGAACTCAGCGTGAACGTCACGGCGGCAGACAACGGCACCGTCACCTACCGCGCTCTCGCGAGCGACGCCGCCGG
AAACACGGCGGAGGCGACGGTCAACGTGGACGTGAGTGTGGACGTCACCAAACCCACCGTCAGTGTGAGTGCTCAGCCGT
CCTCCCTCACCCTCCCGGGCACAGTCACCTTGACGGCGACGGCGAGCGATGACCGGGGCGTCACCAAGGTCGAGTTCTAC
GACAACGGCCAGCTGGTGGCGACCGACACCGGTGCTCCCTACACCGCCAGCCAGACCTACGGCTTCGCGGACAATGGCAA
CCACATCATCTCGGTGAAGGCTTACGACGAGCAGGGCAACGTGGGCGAGTCGGCCACGACACTGAACGTCGCGATCAGCG
ATGCGAACGAACCCAACGACAACCCGACGGACGCCACCCCTCTGACCATCGGCACCGCGCTGAACGGCACCATTGCCGGA
CAAGGCCGCGACTTCGACTACTTCAAGTTTGATGCGGCGCAGGGCGACATGCTCAAACTGACCGTCAAGAGCGTCAGCGT
GGATCCCGCCAGCACGCTCGACCCCTACGTCATGATCCTGATGCCCGACGGCAAGACCGTGCTGGAGAAGGACGACGATA
GCGGTGCGGGCCTGGAGTCGGAGATTCGCTTCAACGCACCGGTGGCAGGCACCTACACGGTGGTCGTGACCAGCTTTGAC
ATCTACGACGATGAGCAGCTGACCGACGACCGGGCGACCAACACCTACCAGATTCTGCTGACGCGCCGCTAA

Upstream 100 bases:

>100_bases
TGGCCCCTTAAACAGGGTCAAATCACCTCTTGCTCTTGCGACATGCCGTTCGTGTTGGCCGTCGTCGTTGACGCGCTCAT
CCGGTCTCTAAGGAGTCCAC

Downstream 100 bases:

>100_bases
CTACGAAGGAGTGAGTCCGTGAACAAGACTGCCAAGACGCTTGCCCTACTCAGCCTGTCCCTGGTTTTGGGTGCCTGCGG
TCAGAGCGGCGCACCCACTG

Product: peptidase-like protein

Products: NA

Alternate protein names: Chitinase; Peptidase S8 And; Serine Protease; Fibronectin Type III Domain Protein; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Glycoside Hydrolase Family Protein; Chitodextrinase; Peptidase-Like Protein; Beta-Glycosidase-Like Protein; YD Repeat-Containing Protein; Alkaline Serine Protease; Glycosyl Hydrolase Family Chitinase; Chitinase-Like Protein; Endochitinase; Aminopeptidase; Thermostable Serine Protease; Subtilase-Type Serine Protease; Esterase Phb Depolymerase Family

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKPHRTLSFALLSGALLLTACGTGSTPPDTMAPKITLSASPKALTKPGSVKLTADASDNVGVSKVEFYRGDSKIGEATAA
PYELSVNVTAADNGTVTYRALASDAAGNTAEATVNVDVSVDVTKPTVSVSAQPSSLTLPGTVTLTATASDDRGVTKVEFY
DNGQLVATDTGAPYTASQTYGFADNGNHIISVKAYDEQGNVGESATTLNVAISDANEPNDNPTDATPLTIGTALNGTIAG
QGRDFDYFKFDAAQGDMLKLTVKSVSVDPASTLDPYVMILMPDGKTVLEKDDDSGAGLESEIRFNAPVAGTYTVVVTSFD
IYDDEQLTDDRATNTYQILLTRR

Sequences:

>Translated_343_residues
MKPHRTLSFALLSGALLLTACGTGSTPPDTMAPKITLSASPKALTKPGSVKLTADASDNVGVSKVEFYRGDSKIGEATAA
PYELSVNVTAADNGTVTYRALASDAAGNTAEATVNVDVSVDVTKPTVSVSAQPSSLTLPGTVTLTATASDDRGVTKVEFY
DNGQLVATDTGAPYTASQTYGFADNGNHIISVKAYDEQGNVGESATTLNVAISDANEPNDNPTDATPLTIGTALNGTIAG
QGRDFDYFKFDAAQGDMLKLTVKSVSVDPASTLDPYVMILMPDGKTVLEKDDDSGAGLESEIRFNAPVAGTYTVVVTSFD
IYDDEQLTDDRATNTYQILLTRR
>Mature_343_residues
MKPHRTLSFALLSGALLLTACGTGSTPPDTMAPKITLSASPKALTKPGSVKLTADASDNVGVSKVEFYRGDSKIGEATAA
PYELSVNVTAADNGTVTYRALASDAAGNTAEATVNVDVSVDVTKPTVSVSAQPSSLTLPGTVTLTATASDDRGVTKVEFY
DNGQLVATDTGAPYTASQTYGFADNGNHIISVKAYDEQGNVGESATTLNVAISDANEPNDNPTDATPLTIGTALNGTIAG
QGRDFDYFKFDAAQGDMLKLTVKSVSVDPASTLDPYVMILMPDGKTVLEKDDDSGAGLESEIRFNAPVAGTYTVVVTSFD
IYDDEQLTDDRATNTYQILLTRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35793; Mature: 35793

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPHRTLSFALLSGALLLTACGTGSTPPDTMAPKITLSASPKALTKPGSVKLTADASDNV
CCCCCEEEEHHHCCEEEEEECCCCCCCCCCCCCEEEEECCCHHHCCCCCEEEEECCCCCC
GVSKVEFYRGDSKIGEATAAPYELSVNVTAADNGTVTYRALASDAAGNTAEATVNVDVSV
CCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEEE
DVTKPTVSVSAQPSSLTLPGTVTLTATASDDRGVTKVEFYDNGQLVATDTGAPYTASQTY
EECCCEEEEECCCCEEECCCEEEEEEECCCCCCCEEEEEEECCEEEEECCCCCEECCCEE
GFADNGNHIISVKAYDEQGNVGESATTLNVAISDANEPNDNPTDATPLTIGTALNGTIAG
CCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEC
QGRDFDYFKFDAAQGDMLKLTVKSVSVDPASTLDPYVMILMPDGKTVLEKDDDSGAGLES
CCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCC
EIRFNAPVAGTYTVVVTSFDIYDDEQLTDDRATNTYQILLTRR
EEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKPHRTLSFALLSGALLLTACGTGSTPPDTMAPKITLSASPKALTKPGSVKLTADASDNV
CCCCCEEEEHHHCCEEEEEECCCCCCCCCCCCCEEEEECCCHHHCCCCCEEEEECCCCCC
GVSKVEFYRGDSKIGEATAAPYELSVNVTAADNGTVTYRALASDAAGNTAEATVNVDVSV
CCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEEE
DVTKPTVSVSAQPSSLTLPGTVTLTATASDDRGVTKVEFYDNGQLVATDTGAPYTASQTY
EECCCEEEEECCCCEEECCCEEEEEEECCCCCCCEEEEEEECCEEEEECCCCCEECCCEE
GFADNGNHIISVKAYDEQGNVGESATTLNVAISDANEPNDNPTDATPLTIGTALNGTIAG
CCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEC
QGRDFDYFKFDAAQGDMLKLTVKSVSVDPASTLDPYVMILMPDGKTVLEKDDDSGAGLES
CCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCC
EIRFNAPVAGTYTVVVTSFDIYDDEQLTDDRATNTYQILLTRR
EEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA