| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94986322
Identifier: 94986322
GI number: 94986322
Start: 2343146
End: 2344177
Strand: Reverse
Name: 94986322
Synonym: Dgeo_2223
Alternate gene names: NA
Gene position: 2344177-2343146 (Counterclockwise)
Preceding gene: 94986323
Following gene: 94986321
Centisome position: 95.01
GC content: 64.05
Gene sequence:
>1032_bases ATGAAACCACACCGTACGCTGTCTTTCGCTCTCCTCTCGGGTGCCCTGCTGCTGACGGCCTGTGGCACGGGCAGCACACC ACCGGACACCATGGCACCCAAGATCACCCTCAGCGCCTCGCCCAAGGCACTCACCAAGCCTGGGAGCGTGAAGCTGACGG CGGACGCCAGCGACAATGTGGGCGTCAGCAAGGTCGAGTTCTACCGGGGTGACAGCAAGATCGGTGAGGCGACGGCGGCG CCCTACGAACTCAGCGTGAACGTCACGGCGGCAGACAACGGCACCGTCACCTACCGCGCTCTCGCGAGCGACGCCGCCGG AAACACGGCGGAGGCGACGGTCAACGTGGACGTGAGTGTGGACGTCACCAAACCCACCGTCAGTGTGAGTGCTCAGCCGT CCTCCCTCACCCTCCCGGGCACAGTCACCTTGACGGCGACGGCGAGCGATGACCGGGGCGTCACCAAGGTCGAGTTCTAC GACAACGGCCAGCTGGTGGCGACCGACACCGGTGCTCCCTACACCGCCAGCCAGACCTACGGCTTCGCGGACAATGGCAA CCACATCATCTCGGTGAAGGCTTACGACGAGCAGGGCAACGTGGGCGAGTCGGCCACGACACTGAACGTCGCGATCAGCG ATGCGAACGAACCCAACGACAACCCGACGGACGCCACCCCTCTGACCATCGGCACCGCGCTGAACGGCACCATTGCCGGA CAAGGCCGCGACTTCGACTACTTCAAGTTTGATGCGGCGCAGGGCGACATGCTCAAACTGACCGTCAAGAGCGTCAGCGT GGATCCCGCCAGCACGCTCGACCCCTACGTCATGATCCTGATGCCCGACGGCAAGACCGTGCTGGAGAAGGACGACGATA GCGGTGCGGGCCTGGAGTCGGAGATTCGCTTCAACGCACCGGTGGCAGGCACCTACACGGTGGTCGTGACCAGCTTTGAC ATCTACGACGATGAGCAGCTGACCGACGACCGGGCGACCAACACCTACCAGATTCTGCTGACGCGCCGCTAA
Upstream 100 bases:
>100_bases TGGCCCCTTAAACAGGGTCAAATCACCTCTTGCTCTTGCGACATGCCGTTCGTGTTGGCCGTCGTCGTTGACGCGCTCAT CCGGTCTCTAAGGAGTCCAC
Downstream 100 bases:
>100_bases CTACGAAGGAGTGAGTCCGTGAACAAGACTGCCAAGACGCTTGCCCTACTCAGCCTGTCCCTGGTTTTGGGTGCCTGCGG TCAGAGCGGCGCACCCACTG
Product: peptidase-like protein
Products: NA
Alternate protein names: Chitinase; Peptidase S8 And; Serine Protease; Fibronectin Type III Domain Protein; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Glycoside Hydrolase Family Protein; Chitodextrinase; Peptidase-Like Protein; Beta-Glycosidase-Like Protein; YD Repeat-Containing Protein; Alkaline Serine Protease; Glycosyl Hydrolase Family Chitinase; Chitinase-Like Protein; Endochitinase; Aminopeptidase; Thermostable Serine Protease; Subtilase-Type Serine Protease; Esterase Phb Depolymerase Family
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKPHRTLSFALLSGALLLTACGTGSTPPDTMAPKITLSASPKALTKPGSVKLTADASDNVGVSKVEFYRGDSKIGEATAA PYELSVNVTAADNGTVTYRALASDAAGNTAEATVNVDVSVDVTKPTVSVSAQPSSLTLPGTVTLTATASDDRGVTKVEFY DNGQLVATDTGAPYTASQTYGFADNGNHIISVKAYDEQGNVGESATTLNVAISDANEPNDNPTDATPLTIGTALNGTIAG QGRDFDYFKFDAAQGDMLKLTVKSVSVDPASTLDPYVMILMPDGKTVLEKDDDSGAGLESEIRFNAPVAGTYTVVVTSFD IYDDEQLTDDRATNTYQILLTRR
Sequences:
>Translated_343_residues MKPHRTLSFALLSGALLLTACGTGSTPPDTMAPKITLSASPKALTKPGSVKLTADASDNVGVSKVEFYRGDSKIGEATAA PYELSVNVTAADNGTVTYRALASDAAGNTAEATVNVDVSVDVTKPTVSVSAQPSSLTLPGTVTLTATASDDRGVTKVEFY DNGQLVATDTGAPYTASQTYGFADNGNHIISVKAYDEQGNVGESATTLNVAISDANEPNDNPTDATPLTIGTALNGTIAG QGRDFDYFKFDAAQGDMLKLTVKSVSVDPASTLDPYVMILMPDGKTVLEKDDDSGAGLESEIRFNAPVAGTYTVVVTSFD IYDDEQLTDDRATNTYQILLTRR >Mature_343_residues MKPHRTLSFALLSGALLLTACGTGSTPPDTMAPKITLSASPKALTKPGSVKLTADASDNVGVSKVEFYRGDSKIGEATAA PYELSVNVTAADNGTVTYRALASDAAGNTAEATVNVDVSVDVTKPTVSVSAQPSSLTLPGTVTLTATASDDRGVTKVEFY DNGQLVATDTGAPYTASQTYGFADNGNHIISVKAYDEQGNVGESATTLNVAISDANEPNDNPTDATPLTIGTALNGTIAG QGRDFDYFKFDAAQGDMLKLTVKSVSVDPASTLDPYVMILMPDGKTVLEKDDDSGAGLESEIRFNAPVAGTYTVVVTSFD IYDDEQLTDDRATNTYQILLTRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35793; Mature: 35793
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPHRTLSFALLSGALLLTACGTGSTPPDTMAPKITLSASPKALTKPGSVKLTADASDNV CCCCCEEEEHHHCCEEEEEECCCCCCCCCCCCCEEEEECCCHHHCCCCCEEEEECCCCCC GVSKVEFYRGDSKIGEATAAPYELSVNVTAADNGTVTYRALASDAAGNTAEATVNVDVSV CCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEEE DVTKPTVSVSAQPSSLTLPGTVTLTATASDDRGVTKVEFYDNGQLVATDTGAPYTASQTY EECCCEEEEECCCCEEECCCEEEEEEECCCCCCCEEEEEEECCEEEEECCCCCEECCCEE GFADNGNHIISVKAYDEQGNVGESATTLNVAISDANEPNDNPTDATPLTIGTALNGTIAG CCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEC QGRDFDYFKFDAAQGDMLKLTVKSVSVDPASTLDPYVMILMPDGKTVLEKDDDSGAGLES CCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCC EIRFNAPVAGTYTVVVTSFDIYDDEQLTDDRATNTYQILLTRR EEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEC >Mature Secondary Structure MKPHRTLSFALLSGALLLTACGTGSTPPDTMAPKITLSASPKALTKPGSVKLTADASDNV CCCCCEEEEHHHCCEEEEEECCCCCCCCCCCCCEEEEECCCHHHCCCCCEEEEECCCCCC GVSKVEFYRGDSKIGEATAAPYELSVNVTAADNGTVTYRALASDAAGNTAEATVNVDVSV CCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEEE DVTKPTVSVSAQPSSLTLPGTVTLTATASDDRGVTKVEFYDNGQLVATDTGAPYTASQTY EECCCEEEEECCCCEEECCCEEEEEEECCCCCCCEEEEEEECCEEEEECCCCCEECCCEE GFADNGNHIISVKAYDEQGNVGESATTLNVAISDANEPNDNPTDATPLTIGTALNGTIAG CCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEC QGRDFDYFKFDAAQGDMLKLTVKSVSVDPASTLDPYVMILMPDGKTVLEKDDDSGAGLES CCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCC EIRFNAPVAGTYTVVVTSFDIYDDEQLTDDRATNTYQILLTRR EEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA