| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94986324
Identifier: 94986324
GI number: 94986324
Start: 2345624
End: 2346886
Strand: Reverse
Name: 94986324
Synonym: Dgeo_2225
Alternate gene names: NA
Gene position: 2346886-2345624 (Counterclockwise)
Preceding gene: 94986325
Following gene: 94986323
Centisome position: 95.12
GC content: 71.34
Gene sequence:
>1263_bases GTGACGACTGTTGCCGCACCCGGAACCCACGTGTGGACCCTGGAGGGAGGACTGACCGCCGCGTTTGAGCGCCGCCGAGG GCCGGGCTTCGCACTGGACCTGCGGGTGCCGGTGGGGAGCGCCCACGATCCGGTGGGTCGGGAAGGTTCCGCGGGCGTCT TGGAGGAGTGGCTCTACAAGGGCGCAGGGGGTCGGAACGCCCGCGCTTTCCAGGATGCGCTGGATGACCTGGGCGTGCGC CGGGGCGGGGGTGTGGGCCCGGAGGCCACTCGCTTCAGCGTGAGTGGCCTGACGGCGGACCTTCCCGCCGCGCTCGGGTT GCTGGCGGACCTGCTTCTGCGGCCTGCCCTGCCGCCAGAGGAACTGCCGGTCCTGGCGGATCTCGCCCGGCAGGATCTGG AGGGGCTGGAGGACAGTCCGCCTGACCTGCTGGCGATCGAAGCGCGGCGGCGGGCCTTTCCCCGTGACCCGGCCTCGCCC TTCGCGGGCTACGCTCATCCGGCCAGCGGCACAGCCGAGGGGCTTTCGAACCTGACGGCACAGAATCTGCGTGCCTTTCT CAACCGCTACGGCACACGCGGCAGCGTGCTGGGCCTGGTGGCCGACGCCGATCCCGGGGAGGTGCGCGGCCTGCTGGAAC GGGCGTTTGCCGGCTGGCACCCCGGCGAGACCGCACCCGTTCCTGCCGACTTCCATCCTGGCCTGCGCGTGCATGTTCCC CACGCCGAGGCCGAGCAGACACACCTCAGCGTCACCGCGCCGGGTGTCGCGCCGCGCGATCCCGACTGGCTGTCTTGGCA GGTGGCGCTGATGGCGCTCTCGGGTGGGAGTGCCAGCCGCCTCTTTCATGCAGTCCGCGAGGAACGGGGCTTGGCCTACA GTGTCAGCGCGGCGCCGATCCTCCTGGGGGGACGGGGTTTCCTGGCCGCCTACGCGGGCAGTACACCCGAGCGCGCGCCC GAGACGCTGGCTGTGCTGTTGGCTGAACTCGCTCGGCTGCCGCAGGGCCTCACCGAGGCTGAGTTTGAGCGGGCCCGCCG TGGCCTCACCGCCAGCGTCGTGTTCGGCGCCGAGAGCCTGCGCGCCCGTGCCAGCAGCCTCACGCGTGATCTGGCGGTGT TTGGGCGGGTGCGCGGCGTGGCCGAACACCGTGCCCAGATTGCGGCCCTCACCCTGGAGCGGGTGAACGCTTTCCTGGCT GAGTATGACCCTGTCGCACAGGCGACCATCGTGACGCTTGGCCCGGCGGAGGTACAGGCATGA
Upstream 100 bases:
>100_bases CGCCTGAGCCTGAAGGCGCCCCCACCCCCCGAGCTGCGCCGCGCGGACGAAACCTGACCGGTCTCCCGGTTTTCCCGTTC GGCGGCGCTACAATCCCCCG
Downstream 100 bases:
>100_bases CCGTCCGCTGCACCCTCCCGAATGGCCTGACTCTCCTCCTTGAACCCGATGCAGAGGCACAGACTGTGGCTGCCGGCTAT TTTGTGGCGACCGGGTCACG
Product: peptidase M16-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTTVAAPGTHVWTLEGGLTAAFERRRGPGFALDLRVPVGSAHDPVGREGSAGVLEEWLYKGAGGRNARAFQDALDDLGVR RGGGVGPEATRFSVSGLTADLPAALGLLADLLLRPALPPEELPVLADLARQDLEGLEDSPPDLLAIEARRRAFPRDPASP FAGYAHPASGTAEGLSNLTAQNLRAFLNRYGTRGSVLGLVADADPGEVRGLLERAFAGWHPGETAPVPADFHPGLRVHVP HAEAEQTHLSVTAPGVAPRDPDWLSWQVALMALSGGSASRLFHAVREERGLAYSVSAAPILLGGRGFLAAYAGSTPERAP ETLAVLLAELARLPQGLTEAEFERARRGLTASVVFGAESLRARASSLTRDLAVFGRVRGVAEHRAQIAALTLERVNAFLA EYDPVAQATIVTLGPAEVQA
Sequences:
>Translated_420_residues MTTVAAPGTHVWTLEGGLTAAFERRRGPGFALDLRVPVGSAHDPVGREGSAGVLEEWLYKGAGGRNARAFQDALDDLGVR RGGGVGPEATRFSVSGLTADLPAALGLLADLLLRPALPPEELPVLADLARQDLEGLEDSPPDLLAIEARRRAFPRDPASP FAGYAHPASGTAEGLSNLTAQNLRAFLNRYGTRGSVLGLVADADPGEVRGLLERAFAGWHPGETAPVPADFHPGLRVHVP HAEAEQTHLSVTAPGVAPRDPDWLSWQVALMALSGGSASRLFHAVREERGLAYSVSAAPILLGGRGFLAAYAGSTPERAP ETLAVLLAELARLPQGLTEAEFERARRGLTASVVFGAESLRARASSLTRDLAVFGRVRGVAEHRAQIAALTLERVNAFLA EYDPVAQATIVTLGPAEVQA >Mature_419_residues TTVAAPGTHVWTLEGGLTAAFERRRGPGFALDLRVPVGSAHDPVGREGSAGVLEEWLYKGAGGRNARAFQDALDDLGVRR GGGVGPEATRFSVSGLTADLPAALGLLADLLLRPALPPEELPVLADLARQDLEGLEDSPPDLLAIEARRRAFPRDPASPF AGYAHPASGTAEGLSNLTAQNLRAFLNRYGTRGSVLGLVADADPGEVRGLLERAFAGWHPGETAPVPADFHPGLRVHVPH AEAEQTHLSVTAPGVAPRDPDWLSWQVALMALSGGSASRLFHAVREERGLAYSVSAAPILLGGRGFLAAYAGSTPERAPE TLAVLLAELARLPQGLTEAEFERARRGLTASVVFGAESLRARASSLTRDLAVFGRVRGVAEHRAQIAALTLERVNAFLAE YDPVAQATIVTLGPAEVQA
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI46593007, Length=429, Percent_Identity=21.9114219114219, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI94538354, Length=431, Percent_Identity=20.6496519721578, Blast_Score=72, Evalue=9e-13, Organism=Caenorhabditis elegans, GI71999683, Length=406, Percent_Identity=19.2118226600985, Blast_Score=72, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6323192, Length=420, Percent_Identity=20.7142857142857, Blast_Score=63, Evalue=7e-11, Organism=Drosophila melanogaster, GI21357875, Length=431, Percent_Identity=20.6496519721578, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24646943, Length=431, Percent_Identity=20.6496519721578, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 44141; Mature: 44010
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVAAPGTHVWTLEGGLTAAFERRRGPGFALDLRVPVGSAHDPVGREGSAGVLEEWLYK CCCCCCCCCEEEEECCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH GAGGRNARAFQDALDDLGVRRGGGVGPEATRFSVSGLTADLPAALGLLADLLLRPALPPE CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCHH ELPVLADLARQDLEGLEDSPPDLLAIEARRRAFPRDPASPFAGYAHPASGTAEGLSNLTA HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH QNLRAFLNRYGTRGSVLGLVADADPGEVRGLLERAFAGWHPGETAPVPADFHPGLRVHVP HHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECC HAEAEQTHLSVTAPGVAPRDPDWLSWQVALMALSGGSASRLFHAVREERGLAYSVSAAPI CCCCCCCEEEEECCCCCCCCCCHHHHEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCEE LLGGRGFLAAYAGSTPERAPETLAVLLAELARLPQGLTEAEFERARRGLTASVVFGAESL EECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECHHHH RARASSLTRDLAVFGRVRGVAEHRAQIAALTLERVNAFLAEYDPVAQATIVTLGPAEVQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHCCC >Mature Secondary Structure TTVAAPGTHVWTLEGGLTAAFERRRGPGFALDLRVPVGSAHDPVGREGSAGVLEEWLYK CCCCCCCCEEEEECCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH GAGGRNARAFQDALDDLGVRRGGGVGPEATRFSVSGLTADLPAALGLLADLLLRPALPPE CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCHH ELPVLADLARQDLEGLEDSPPDLLAIEARRRAFPRDPASPFAGYAHPASGTAEGLSNLTA HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH QNLRAFLNRYGTRGSVLGLVADADPGEVRGLLERAFAGWHPGETAPVPADFHPGLRVHVP HHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECC HAEAEQTHLSVTAPGVAPRDPDWLSWQVALMALSGGSASRLFHAVREERGLAYSVSAAPI CCCCCCCEEEEECCCCCCCCCCHHHHEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCEE LLGGRGFLAAYAGSTPERAPETLAVLLAELARLPQGLTEAEFERARRGLTASVVFGAESL EECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECHHHH RARASSLTRDLAVFGRVRGVAEHRAQIAALTLERVNAFLAEYDPVAQATIVTLGPAEVQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA